Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4l11
         (218 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U11279-1|AAW88399.1| 2886|Caenorhabditis elegans Sensory axon gu...    28   0.78 
AY763581-1|AAV41897.1| 2914|Caenorhabditis elegans SAX-2 protein.      28   0.78 
AL033510-5|CAA22068.1|  239|Caenorhabditis elegans Hypothetical ...    26   4.2  
U23510-5|AAY55872.1|  110|Caenorhabditis elegans Hypothetical pr...    25   5.5  
AF016430-9|ABR92614.1|  199|Caenorhabditis elegans Hypothetical ...    25   5.5  
AF016430-8|AAK95868.2|  200|Caenorhabditis elegans Hypothetical ...    25   5.5  
AL034543-1|CAA22516.1|  243|Caenorhabditis elegans Hypothetical ...    25   7.3  
Z81453-3|CAB03791.1|  480|Caenorhabditis elegans Hypothetical pr...    25   9.6  
Z66521-13|CAA91403.1|  444|Caenorhabditis elegans Hypothetical p...    25   9.6  

>U11279-1|AAW88399.1| 2886|Caenorhabditis elegans Sensory axon
            guidance protein 2,isoform a protein.
          Length = 2886

 Score = 28.3 bits (60), Expect = 0.78
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +2

Query: 125  QYSCNGCPTLQTETHYCFTAEI 190
            QY C+GC  L  ET  C  AE+
Sbjct: 2117 QYICDGCIALNVETLMCLLAEM 2138


>AY763581-1|AAV41897.1| 2914|Caenorhabditis elegans SAX-2 protein.
          Length = 2914

 Score = 28.3 bits (60), Expect = 0.78
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +2

Query: 125  QYSCNGCPTLQTETHYCFTAEI 190
            QY C+GC  L  ET  C  AE+
Sbjct: 2145 QYICDGCIALNVETLMCLLAEM 2166


>AL033510-5|CAA22068.1|  239|Caenorhabditis elegans Hypothetical
           protein Y40H7A.9 protein.
          Length = 239

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 13/47 (27%), Positives = 25/47 (53%)
 Frame = -3

Query: 210 LSTTTLPISAVKQ*CVSVWRVGQPLQLY*DLRIYISSWLALLRHRCL 70
           +S  T+ IS +    V +W++G+ +QL+    IY      L + +C+
Sbjct: 153 ISFFTIIISTMITCYVCMWKIGEKVQLFRHSMIYNEVQQELFKAQCI 199


>U23510-5|AAY55872.1|  110|Caenorhabditis elegans Hypothetical
           protein R12C12.10 protein.
          Length = 110

 Score = 25.4 bits (53), Expect = 5.5
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +2

Query: 116 LRSQYSCNGCPTLQ 157
           L+ Q +CNGCPT Q
Sbjct: 22  LQPQPTCNGCPTCQ 35


>AF016430-9|ABR92614.1|  199|Caenorhabditis elegans Hypothetical
          protein C05C8.1b protein.
          Length = 199

 Score = 25.4 bits (53), Expect = 5.5
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +3

Query: 33 HSPPGVKWLLEPIDIYDAK 89
          H+ PG++W+LE  + YD +
Sbjct: 17 HNIPGLRWVLEGFNNYDVQ 35


>AF016430-8|AAK95868.2|  200|Caenorhabditis elegans Hypothetical
          protein C05C8.1a protein.
          Length = 200

 Score = 25.4 bits (53), Expect = 5.5
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +3

Query: 33 HSPPGVKWLLEPIDIYDAK 89
          H+ PG++W+LE  + YD +
Sbjct: 17 HNIPGLRWVLEGFNNYDVQ 35


>AL034543-1|CAA22516.1|  243|Caenorhabditis elegans Hypothetical
           protein Y81G3A.1 protein.
          Length = 243

 Score = 25.0 bits (52), Expect = 7.3
 Identities = 12/27 (44%), Positives = 13/27 (48%)
 Frame = +1

Query: 22  VDELTAHLVLSGYWSP*TSMTQKCQPT 102
           +D LTA L   G W P  S T   Q T
Sbjct: 198 IDHLTATLPFGGLWIPNRSQTLLAQST 224


>Z81453-3|CAB03791.1|  480|Caenorhabditis elegans Hypothetical
           protein B0250.4 protein.
          Length = 480

 Score = 24.6 bits (51), Expect = 9.6
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -2

Query: 196 PAYFCREAVMRFGLE 152
           P YFC    MRFG E
Sbjct: 267 PTYFCDRCPMRFGTE 281


>Z66521-13|CAA91403.1|  444|Caenorhabditis elegans Hypothetical
           protein W02B12.8a protein.
          Length = 444

 Score = 24.6 bits (51), Expect = 9.6
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +3

Query: 27  RAHSPPGVKWLLEPIDIYDAKVPTNLR 107
           R+H+ P V+WL +     D +   NL+
Sbjct: 140 RSHNKPPVRWLFQAYKQLDRRFKKNLK 166


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,447,303
Number of Sequences: 27780
Number of extensions: 87890
Number of successful extensions: 157
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 157
length of database: 12,740,198
effective HSP length: 52
effective length of database: 11,295,638
effective search space used: 225912760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)