Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte4l11
(218 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 1.3
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 21 1.7
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 20 3.0
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 20 3.0
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 20 3.0
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 19 5.3
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 19 5.3
AY823258-1|AAX18443.1| 145|Apis mellifera pburs protein. 19 6.9
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 19 6.9
AM420632-1|CAM06632.1| 145|Apis mellifera bursicon subunit beta... 19 6.9
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 19 6.9
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 19 9.2
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 19 9.2
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.4 bits (43), Expect = 1.3
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +3
Query: 33 HSPPGVKWLLEPIDI 77
H PP +W++EP D+
Sbjct: 703 HVPP--RWIVEPTDV 715
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 21.0 bits (42), Expect = 1.7
Identities = 7/18 (38%), Positives = 9/18 (50%)
Frame = +2
Query: 128 YSCNGCPTLQTETHYCFT 181
+SC CP + Y FT
Sbjct: 277 HSCEACPAHSKSSDYGFT 294
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 20.2 bits (40), Expect = 3.0
Identities = 8/31 (25%), Positives = 16/31 (51%)
Frame = +3
Query: 57 LLEPIDIYDAKVPTNLRYKF*GLSIVATAAP 149
+L+ +YD +VP + ++ G + V P
Sbjct: 538 ILQAPTLYDDRVPIDKKFNEFGTTAVVNCPP 568
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 20.2 bits (40), Expect = 3.0
Identities = 8/31 (25%), Positives = 16/31 (51%)
Frame = +3
Query: 57 LLEPIDIYDAKVPTNLRYKF*GLSIVATAAP 149
+L+ +YD +VP + ++ G + V P
Sbjct: 538 ILQAPTLYDDRVPIDKKFNEFGTTAVVNCPP 568
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 20.2 bits (40), Expect = 3.0
Identities = 7/16 (43%), Positives = 8/16 (50%)
Frame = -1
Query: 140 RCNYTETLEFISQVGW 93
RCN T +I GW
Sbjct: 363 RCNATGAFSWIGSDGW 378
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 19.4 bits (38), Expect = 5.3
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -3
Query: 120 LRIYISSWLALLRHR 76
+ +I WL LLR+R
Sbjct: 539 IHTWIHPWLPLLRNR 553
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 19.4 bits (38), Expect = 5.3
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2
Query: 137 NGCPTLQTETHYCF 178
NG +Q ETH CF
Sbjct: 382 NGAELMQ-ETHVCF 394
>AY823258-1|AAX18443.1| 145|Apis mellifera pburs protein.
Length = 145
Score = 19.0 bits (37), Expect = 6.9
Identities = 10/21 (47%), Positives = 12/21 (57%), Gaps = 2/21 (9%)
Frame = +2
Query: 143 CPTLQTETHYCFTA--EIGRV 199
C TLQ+E H EIGR+
Sbjct: 36 CETLQSEVHITKDEYDEIGRL 56
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 19.0 bits (37), Expect = 6.9
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +3
Query: 39 PPGVKWLLEPID 74
PP +W+LEP D
Sbjct: 678 PP--RWILEPTD 687
>AM420632-1|CAM06632.1| 145|Apis mellifera bursicon subunit beta
protein precursor protein.
Length = 145
Score = 19.0 bits (37), Expect = 6.9
Identities = 10/21 (47%), Positives = 12/21 (57%), Gaps = 2/21 (9%)
Frame = +2
Query: 143 CPTLQTETHYCFTA--EIGRV 199
C TLQ+E H EIGR+
Sbjct: 36 CETLQSEVHITKDEYDEIGRL 56
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 19.0 bits (37), Expect = 6.9
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = +3
Query: 39 PPGVKWLLEPIDI 77
PP +W++EP D+
Sbjct: 709 PP--RWIVEPTDV 719
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 18.6 bits (36), Expect = 9.2
Identities = 6/18 (33%), Positives = 12/18 (66%)
Frame = -3
Query: 165 VSVWRVGQPLQLY*DLRI 112
V +W+ G P+Q+ +L +
Sbjct: 189 VFLWKEGDPVQVVKNLHL 206
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 18.6 bits (36), Expect = 9.2
Identities = 6/18 (33%), Positives = 12/18 (66%)
Frame = -3
Query: 165 VSVWRVGQPLQLY*DLRI 112
V +W+ G P+Q+ +L +
Sbjct: 189 VFLWKEGDPVQVVKNLHL 206
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,996
Number of Sequences: 438
Number of extensions: 942
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 46
effective length of database: 126,195
effective search space used: 3281070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)
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