Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte4k22
(701 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC14F5.07 |||ER-localized ubiquitin ligase |Schizosaccharomyce... 42 6e-05
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 42 9e-05
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 40 3e-04
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 32 0.091
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 29 0.64
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 29 0.85
SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transpo... 28 1.1
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 28 1.1
SPBC660.11 |tcg1|mug187|single-stranded telomeric binding protei... 28 1.1
SPAC6B12.02c |mus7||DNA repair protein Mus7|Schizosaccharomyces ... 28 1.5
SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces ... 28 1.5
SPBC32H8.11 |mei4||meiotic forkhead transcription factor Mei4 |S... 28 1.5
SPCC4G3.10c |rhp42|rhp4b|DNA repair protein Rhp42|Schizosaccharo... 27 2.6
SPBP4H10.07 |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 27 2.6
SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3 |Schizosaccha... 27 2.6
SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces ... 27 3.4
SPBC21D10.09c |||ubiquitin-protein ligase E3 |Schizosaccharomyce... 27 3.4
SPAC29B12.02c |set2||histone lysine methyltransferase Set2 |Schi... 26 4.5
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 26 4.5
SPAC6G9.15c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 6.0
SPAC30C2.04 |||cofactor for methionyl-and glutamyl-tRNA syntheta... 25 7.9
SPAC22A12.09c |sap114||splicing factor Sap114|Schizosaccharomyce... 25 7.9
SPBC2G2.14 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 7.9
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 25 7.9
SPBC800.10c |||EPS15 repeat family actin cortical patch componen... 25 7.9
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 25 7.9
>SPBC14F5.07 |||ER-localized ubiquitin ligase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1242
Score = 42.3 bits (95), Expect = 6e-05
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +1
Query: 568 EEMCRICHGAEGA----LVAACRCRGTVGRVHVRCLERWLTEAAKSRC 699
+E+CR+C EGA L C+C G++ VH CL WL + K+ C
Sbjct: 5 DEICRVCR-CEGAPDSPLFHPCKCTGSIRYVHQECLVEWLGHSKKTHC 51
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 41.9 bits (94), Expect = 9e-05
Identities = 36/149 (24%), Positives = 72/149 (48%)
Frame = +1
Query: 112 SVQNDTQRPKSHRARGASNNSYKSKSALPDHAGENCVQKNKTRPNSSNEICSLNVSDDHE 291
S ND+ S +S+ S S+ D E+ + + + +SS+ S + S+D++
Sbjct: 123 SEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSE-SESSSEDND 181
Query: 292 SSASLATTKQRSTATLDKDVAASSSNIDLYHYLRAPENASVASSVTLNGESETNCKQNDS 471
SS+S + ++ S++ D D ++SSS+ + + S +SS + + ESE++ + NDS
Sbjct: 182 SSSSSSDSESESSSE-DSDSSSSSSDSE----SESSSEGSDSSSSSSSSESESSSEDNDS 236
Query: 472 LVSQHRIKVRSPKRCAPTIDDTEQAEGRS 558
S + S + + + +E S
Sbjct: 237 SSSSSDSESESSSEDSDSSSSSSDSESES 265
Score = 35.9 bits (79), Expect = 0.006
Identities = 24/124 (19%), Positives = 56/124 (45%), Gaps = 1/124 (0%)
Frame = +1
Query: 112 SVQNDTQRPKSHRARGASNNSYKSKSALPDHAGENCVQKNKTRPNSSNEICSLNVSDDHE 291
S ++++ +S++ +S+S+ D + +++ +S + S N SD +
Sbjct: 222 SSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSKDSDSSSNSSDSED 281
Query: 292 SSASLATTKQRSTATLDKDVAASSSNIDLYHYLR-APENASVASSVTLNGESETNCKQND 468
S+S ++ + +++ D D +SSS+ D N +S ++ +S TN ++
Sbjct: 282 DSSSDSSDSESESSSEDSDSTSSSSDSDSSSSSEDGNSNTDTTTSGEVSAQSSTNSTSSE 341
Query: 469 SLVS 480
S
Sbjct: 342 ESTS 345
Score = 35.1 bits (77), Expect = 0.010
Identities = 27/120 (22%), Positives = 63/120 (52%)
Frame = +1
Query: 112 SVQNDTQRPKSHRARGASNNSYKSKSALPDHAGENCVQKNKTRPNSSNEICSLNVSDDHE 291
S ND+ S +S+ S S+ D E+ + + + +SS+ S + S+D++
Sbjct: 177 SEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSE-SESSSEDND 235
Query: 292 SSASLATTKQRSTATLDKDVAASSSNIDLYHYLRAPENASVASSVTLNGESETNCKQNDS 471
SS+S + ++ S++ D D ++SSS+ + + +++S +S + S+++ +++S
Sbjct: 236 SSSSSSDSESESSSE-DSDSSSSSSDSESESSSKDSDSSSNSSDSEDDSSSDSSDSESES 294
Score = 33.9 bits (74), Expect = 0.023
Identities = 28/105 (26%), Positives = 56/105 (53%)
Frame = +1
Query: 244 NSSNEICSLNVSDDHESSASLATTKQRSTATLDKDVAASSSNIDLYHYLRAPENASVASS 423
+SS+E S + S+D++SS+S + ++ S++ D D ++SSS+ + + S +SS
Sbjct: 114 SSSSE--SESSSEDNDSSSSSSDSESESSSE-DSDSSSSSSDSE----SESSSEGSDSSS 166
Query: 424 VTLNGESETNCKQNDSLVSQHRIKVRSPKRCAPTIDDTEQAEGRS 558
+ + ESE++ + NDS S + S + + + +E S
Sbjct: 167 SSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESES 211
Score = 33.9 bits (74), Expect = 0.023
Identities = 29/117 (24%), Positives = 61/117 (52%)
Frame = +1
Query: 121 NDTQRPKSHRARGASNNSYKSKSALPDHAGENCVQKNKTRPNSSNEICSLNVSDDHESSA 300
+D+ S +S+ S S+ D E+ + + + +SS+ S + S+ +SS+
Sbjct: 162 SDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSE-SESSSEGSDSSS 220
Query: 301 SLATTKQRSTATLDKDVAASSSNIDLYHYLRAPENASVASSVTLNGESETNCKQNDS 471
S ++++ S++ D D ++SSS+ + + S +SS + + ESE++ K +DS
Sbjct: 221 SSSSSESESSSE-DNDSSSSSSDSE----SESSSEDSDSSSSSSDSESESSSKDSDS 272
Score = 32.3 bits (70), Expect = 0.069
Identities = 29/140 (20%), Positives = 66/140 (47%)
Frame = +1
Query: 139 KSHRARGASNNSYKSKSALPDHAGENCVQKNKTRPNSSNEICSLNVSDDHESSASLATTK 318
K+H + AS + S + + ++ +SS++ S + S+D +SS+S + ++
Sbjct: 95 KAHSSSEASGSGSSSDESDSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSE 154
Query: 319 QRSTATLDKDVAASSSNIDLYHYLRAPENASVASSVTLNGESETNCKQNDSLVSQHRIKV 498
S++ D ++SSS+ + + + +SS + + ESE++ + +DS S +
Sbjct: 155 SESSSE-GSDSSSSSSSSE----SESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSES 209
Query: 499 RSPKRCAPTIDDTEQAEGRS 558
S + + + +E S
Sbjct: 210 ESSSEGSDSSSSSSSSESES 229
Score = 30.7 bits (66), Expect = 0.21
Identities = 30/133 (22%), Positives = 65/133 (48%)
Frame = +1
Query: 160 ASNNSYKSKSALPDHAGENCVQKNKTRPNSSNEICSLNVSDDHESSASLATTKQRSTATL 339
+S+ S S+ D E+ + + + +SS+ S + S+ +SS+S ++++ S++
Sbjct: 121 SSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSE-SESSSEGSDSSSSSSSSESESSSE- 178
Query: 340 DKDVAASSSNIDLYHYLRAPENASVASSVTLNGESETNCKQNDSLVSQHRIKVRSPKRCA 519
D D ++SSS+ + + S +SS + + ESE++ + +DS S + S
Sbjct: 179 DNDSSSSSSDSE----SESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDN 234
Query: 520 PTIDDTEQAEGRS 558
+ + +E S
Sbjct: 235 DSSSSSSDSESES 247
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 40.3 bits (90), Expect = 3e-04
Identities = 28/82 (34%), Positives = 45/82 (54%)
Frame = +1
Query: 235 TRPNSSNEICSLNVSDDHESSASLATTKQRSTATLDKDVAASSSNIDLYHYLRAPENASV 414
T P SS+ I SL S +SS+S A+ S+ATL +AS ++ H L + ++ V
Sbjct: 72 TSPASSSFITSLVSSSSQQSSSSSASLTSSSSATLTSSSSASPTSSSSSHALSSSSSSLV 131
Query: 415 ASSVTLNGESETNCKQNDSLVS 480
ASS + +G S ++ + S+ S
Sbjct: 132 ASS-SSSGMSSSSLSHSSSVPS 152
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 31.9 bits (69), Expect = 0.091
Identities = 27/132 (20%), Positives = 61/132 (46%)
Frame = +1
Query: 178 KSKSALPDHAGENCVQKNKTRPNSSNEICSLNVSDDHESSASLATTKQRSTATLDKDVAA 357
++ S P +K+K + SS+E S + S + ESS+S + + + + + ++
Sbjct: 60 RASSPEPSKKSVKKQKKSKKKEESSSESESESSSSESESSSSESESSSSESESSSSESSS 119
Query: 358 SSSNIDLYHYLRAPENASVASSVTLNGESETNCKQNDSLVSQHRIKVRSPKRCAPTIDDT 537
S S ++ ++ E +S + + ESE ++ +++V K S + +
Sbjct: 120 SESEEEVI--VKTEEKKESSSESSSSSESE---EEEEAVVKIEEKKESSSDSSSESSSSE 174
Query: 538 EQAEGRSLDAEE 573
++E S ++EE
Sbjct: 175 SESESSSSESEE 186
Score = 27.5 bits (58), Expect = 2.0
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = +3
Query: 564 CRGDVSDLSRRGGSAGGCVSLSGHGGSSARALSGAVAHRG 683
CR D S GGS GG G GG R G RG
Sbjct: 436 CRLDFSTPRTGGGSRGGRGGFGGRGGFGGRGGFGGGRGRG 475
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 29.1 bits (62), Expect = 0.64
Identities = 22/104 (21%), Positives = 48/104 (46%)
Frame = +1
Query: 247 SSNEICSLNVSDDHESSASLATTKQRSTATLDKDVAASSSNIDLYHYLRAPENASVASSV 426
+S+ I S +++ +S+SLA++ ST + +A+SS++ + ++S+ASS
Sbjct: 140 ASSSITSSSLASSSTTSSSLASSSTNSTTSATPTSSATSSSLSSTAASNSATSSSLASS- 198
Query: 427 TLNGESETNCKQNDSLVSQHRIKVRSPKRCAPTIDDTEQAEGRS 558
+LN + + + S + +++ T A S
Sbjct: 199 SLNSTTSATATSSSLSSTAASNSATSSSLASSSLNSTTSATATS 242
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 28.7 bits (61), Expect = 0.85
Identities = 18/69 (26%), Positives = 34/69 (49%)
Frame = +1
Query: 160 ASNNSYKSKSALPDHAGENCVQKNKTRPNSSNEICSLNVSDDHESSASLATTKQRSTATL 339
+S++S S S+ + + + P SS+ S + S SS S T+ +S+++
Sbjct: 309 SSSSSSSSFSSTLSSSSMSSSSSFSSSPTSSSSTISSSSSSPSSSSFSSTTSSSKSSSSF 368
Query: 340 DKDVAASSS 366
V++SSS
Sbjct: 369 SSTVSSSSS 377
>SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux
transporter Bfr1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1530
Score = 28.3 bits (60), Expect = 1.1
Identities = 27/103 (26%), Positives = 40/103 (38%), Gaps = 2/103 (1%)
Frame = +1
Query: 94 TRRRRFSVQNDTQRPKSHRARGASNNSYKSKSALPDHAGENCVQKNKTR--PNSSNEICS 267
T R S +D S + ++S S + H E K P+SSNE
Sbjct: 21 TEVTRISNSSDHFEDSSSNVDESLDSSNPSSNEKASHTNEEYRSKGNQSYVPSSSNE--- 77
Query: 268 LNVSDDHESSASLATTKQRSTATLDKDVAASSSNIDLYHYLRA 396
S + S++ +++ S L D N +L HYLRA
Sbjct: 78 --PSPESSSNSDSSSSDDSSVDRLAGDPFELGENFNLKHYLRA 118
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 28.3 bits (60), Expect = 1.1
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = -2
Query: 673 ATAPDSARALDPPCPDSDTQPP-ALPPRRDRSDTSPLHRATCP 548
+ AP SA A PP P S+ +PP + PPR SP P
Sbjct: 121 SAAPPSAPA--PPTPQSELRPPTSAPPRPSIPPPSPASAPPIP 161
>SPBC660.11 |tcg1|mug187|single-stranded telomeric binding protein
Tgc1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 348
Score = 28.3 bits (60), Expect = 1.1
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +1
Query: 223 QKNKTRPNSSNEICSLNVSDDHESSASLATTKQRSTAT 336
+KN+ P ++E NVSD E AS ++++S T
Sbjct: 305 EKNENEPIEASESAPTNVSDSTEPKASEVDSEEKSGVT 342
>SPAC6B12.02c |mus7||DNA repair protein Mus7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1888
Score = 27.9 bits (59), Expect = 1.5
Identities = 23/73 (31%), Positives = 36/73 (49%)
Frame = +1
Query: 277 SDDHESSASLATTKQRSTATLDKDVAASSSNIDLYHYLRAPENASVASSVTLNGESETNC 456
SDD ES+ +K+ + T D D+A SS+ I+ + E S ++ + +S TN
Sbjct: 197 SDDDESNTEQDHSKESNLNTADNDLALSST-IEGKKTSTSKEALESESLLSDSDQSMTNI 255
Query: 457 KQNDSLVSQHRIK 495
N S VS +K
Sbjct: 256 SSN-STVSDLNLK 267
>SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 599
Score = 27.9 bits (59), Expect = 1.5
Identities = 18/67 (26%), Positives = 28/67 (41%)
Frame = +1
Query: 127 TQRPKSHRARGASNNSYKSKSALPDHAGENCVQKNKTRPNSSNEICSLNVSDDHESSASL 306
T+RP++HR S S SK+ P+ + +K S E + S + E S S
Sbjct: 493 TERPETHRTLSYSRLSELSKTFSPEIREPSLTKKTAVSMQESKEEGRSDESSESEESGSS 552
Query: 307 ATTKQRS 327
+ S
Sbjct: 553 SDESDNS 559
>SPBC32H8.11 |mei4||meiotic forkhead transcription factor Mei4
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 517
Score = 27.9 bits (59), Expect = 1.5
Identities = 35/134 (26%), Positives = 55/134 (41%), Gaps = 4/134 (2%)
Frame = +1
Query: 115 VQNDTQRPKSHRARGASNNSYKSKSALPDH--AGENCVQKNKTRPNSSNEICSLNVSDDH 288
V ND +P + + +S NS K LP + +N +PN+ + L D H
Sbjct: 228 VSNDASQPSN---QDSSLNSNIVKPPLPPSNVQSNSSSSENVPKPNAETQE-DLPTIDAH 283
Query: 289 ESSASLATTKQRS-TATLDKDVAASSSNIDLYH-YLRAPENASVASSVTLNGESETNCKQ 462
ESS R +++A ++ D YLR ++ +S+ + E + Q
Sbjct: 284 ESSLYENVNDSRLYEVPACRNMALNTGYSDADPGYLRTSFRSNSHNSLPYSANEEEDVLQ 343
Query: 463 NDSLVSQHRIKVRS 504
D LVSQ V S
Sbjct: 344 ADFLVSQQSSMVSS 357
>SPCC4G3.10c |rhp42|rhp4b|DNA repair protein
Rhp42|Schizosaccharomyces pombe|chr 3|||Manual
Length = 686
Score = 27.1 bits (57), Expect = 2.6
Identities = 23/110 (20%), Positives = 47/110 (42%), Gaps = 2/110 (1%)
Frame = +1
Query: 112 SVQNDTQRPKSHRARGASNNSYKSKSALPDHAGEN--CVQKNKTRPNSSNEICSLNVSDD 285
S N QR S +G+ ++ K S+ D ++ ++ PN + L++
Sbjct: 68 SALNSLQRSASSSEKGSDEDNEKLGSSEDDEFDDDFDTWEQVDLSPNKQEDKKDLHIVTQ 127
Query: 286 HESSASLATTKQRSTATLDKDVAASSSNIDLYHYLRAPENASVASSVTLN 435
H + +K+ S++ +DK + S I + H+ + SV + +N
Sbjct: 128 HITPQLTKESKKGSSSAMDKSIRLS---IHIMHFTCLLYHGSVRNRWLMN 174
>SPBP4H10.07 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 583
Score = 27.1 bits (57), Expect = 2.6
Identities = 42/183 (22%), Positives = 73/183 (39%), Gaps = 8/183 (4%)
Frame = +1
Query: 169 NSYKSKSALPDHAGENCVQKNKTRPNSSNEICSL-----NVSDDHESSASLATTKQRSTA 333
NS +++ D+ G N N+ S +E S +SD++ SS A + + +
Sbjct: 390 NSQNQTTSVSDNTGPN-ENVNEAEHISEDEQASTATDVNGISDNNGSSTQQAPETRNNNS 448
Query: 334 TLDKDVAASSSNIDLYHYLRAPENASVASSVTLNGESETNCKQNDSLVSQHRIKVRSPKR 513
D + S + ++ P+N V + +L +S T D L+ I + P
Sbjct: 449 QTDHQLPRSWAIYVREAFV--PQNHPVLRAPSLFTDSPT---YEDMLLLNSIIGIEKPPV 503
Query: 514 CAPTIDDTEQAEG--RSLDAEEMCRICHGAEGALVAACRCRGTVGRV-HVRCLERWLTEA 684
+ D E+A G +E C +C + L CR H C+++WLT +
Sbjct: 504 ASQK--DLEKAGGVFPFSGTDERCLVCL-SNFELNDECRRLKQCNHFFHRECIDQWLTSS 560
Query: 685 AKS 693
S
Sbjct: 561 QNS 563
>SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 578
Score = 27.1 bits (57), Expect = 2.6
Identities = 12/47 (25%), Positives = 23/47 (48%)
Frame = -3
Query: 273 IQRTNLIGTVRTCLVLLYTIFSGMVGERGLRFVAVIGGAPRSVRLRS 133
+ R ++ R + Y + ++ L+ V V GGAP+S + R+
Sbjct: 236 VPRVLVVSPTRELAIQTYENLNSLIQGTNLKAVVVYGGAPKSEQARA 282
>SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 557
Score = 26.6 bits (56), Expect = 3.4
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 160 ASNNSYKSKSALPDHAGENCVQKNKTRPNSSNEICSLN 273
++NN A D EN V+K++TRP+ + S N
Sbjct: 520 SANNDVHEPVARQDPFNENEVEKSRTRPSQESYTTSSN 557
>SPBC21D10.09c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1610
Score = 26.6 bits (56), Expect = 3.4
Identities = 13/45 (28%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
Frame = +1
Query: 571 EMCRICHGAEGA--LVAACRCRGTVGRVHVRCLERWLTEAAKSRC 699
E C IC+ + RC + H CL +W + SRC
Sbjct: 1556 EECAICYSVLSVERTLPNKRCGTCRHKFHASCLYKWFKSSNSSRC 1600
>SPAC29B12.02c |set2||histone lysine methyltransferase Set2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 798
Score = 26.2 bits (55), Expect = 4.5
Identities = 22/93 (23%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Frame = +1
Query: 127 TQRPKSHRARGASNNSYKSKSALPDHAGENCVQKN---KTRPNSSNEICSLNVSDDHESS 297
+ RP R+R N Y+S H+ N +KN K R S+++ S + ++E
Sbjct: 557 SSRPSDSRSRSKFGNDYQS------HSKHNLFRKNSFPKRRRLSNSDTPSETTTPNNEQE 610
Query: 298 ASLATTKQRSTATLDKDVAASSSNIDLYHYLRA 396
+ Q + L+K ++A+ +++ + L+A
Sbjct: 611 ---QVSNQANKVDLNKIISAAMESVNQKNVLKA 640
>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 569
Score = 26.2 bits (55), Expect = 4.5
Identities = 30/143 (20%), Positives = 56/143 (39%), Gaps = 7/143 (4%)
Frame = +1
Query: 142 SHRARGASNNSYKSKSALPDHAGENCVQKNKTRPNSSNEICSLNVSDDHESSASLATTKQ 321
S G+SN K ++ P + +K +T + + S +VSD E S
Sbjct: 350 SEEQMGSSNAKSKVLTSEPKDSTSVEAEKTETDEPAVGKGAS-DVSDTAEISEKTEAKNA 408
Query: 322 RSTATLDK--DVAASSSNID-----LYHYLRAPENASVASSVTLNGESETNCKQNDSLVS 480
S A L++ DV + D H ++ + + T E++ K+ DS+ +
Sbjct: 409 DSEANLEEKSDVGEEKESKDENNKASLHKDVEEKDTKITNEDTGKTETDVKAKETDSIEA 468
Query: 481 QHRIKVRSPKRCAPTIDDTEQAE 549
+ + K +++TE E
Sbjct: 469 NDKDEKTDSKETEDKVEETESKE 491
>SPAC6G9.15c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 498
Score = 25.8 bits (54), Expect = 6.0
Identities = 16/53 (30%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Frame = +1
Query: 352 AASSSNIDLYHYLRAPENASVASSVTLNGESETNCKQ--NDSLVSQHRIKVRS 504
A+++S+I+ EN++V + +LNG + +N K+ N +L R+KV++
Sbjct: 176 ASTNSSINNMVSTVNSENSNVNNGSSLNGNTSSNLKRKANVTLGDYKRLKVKN 228
>SPAC30C2.04 |||cofactor for methionyl-and glutamyl-tRNA synthetases
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 450
Score = 25.4 bits (53), Expect = 7.9
Identities = 13/47 (27%), Positives = 21/47 (44%)
Frame = +1
Query: 298 ASLATTKQRSTATLDKDVAASSSNIDLYHYLRAPENASVASSVTLNG 438
A+L RS + ASS + + ++ PENA + +T G
Sbjct: 339 ANLKPVNMRSVKSQAMVFCASSPDKSVVEFVLPPENAEIGDRLTFEG 385
>SPAC22A12.09c |sap114||splicing factor Sap114|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 481
Score = 25.4 bits (53), Expect = 7.9
Identities = 20/89 (22%), Positives = 31/89 (34%)
Frame = +1
Query: 256 EICSLNVSDDHESSASLATTKQRSTATLDKDVAASSSNIDLYHYLRAPENASVASSVTLN 435
E+ SD+H A TATL++ A + Y AP A ++
Sbjct: 265 EVIQFTKSDEHAKLAKPTNLADLQTATLEQKSAMFTMPDQNYTIEEAPPTAEPWEPISAP 324
Query: 436 GESETNCKQNDSLVSQHRIKVRSPKRCAP 522
+ E SL S + + S +P
Sbjct: 325 KKQEFGVSLPPSLASPEKGGISSTTSVSP 353
>SPBC2G2.14 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 533
Score = 25.4 bits (53), Expect = 7.9
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +1
Query: 229 NKTRPNSSNEICSLNVSDDHESSASLATTKQRSTATLDKDVAASSSNID 375
N+T +SN LN ++++++ +L + K S+ D SSSNID
Sbjct: 309 NRTSFLNSNNNLKLNEAEENQNLLNLRSPK--SSGKADNLTIKSSSNID 355
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 25.4 bits (53), Expect = 7.9
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = +1
Query: 235 TRPNSSNEICSLNVSDDHESSASLATTKQRSTATLDKDVAASSSN 369
T P+SS+ S + S SS+S +++ S+++ ++SSS+
Sbjct: 153 TSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 197
>SPBC800.10c |||EPS15 repeat family actin cortical patch component
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1116
Score = 25.4 bits (53), Expect = 7.9
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -2
Query: 670 TAPDSARALDPPCPDSDTQPPALPPRRDRS 581
+AP + + P P +PP P RRDRS
Sbjct: 907 SAPFATETISTPAP---VKPPVPPSRRDRS 933
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 25.4 bits (53), Expect = 7.9
Identities = 29/119 (24%), Positives = 48/119 (40%), Gaps = 6/119 (5%)
Frame = +1
Query: 115 VQNDTQRPKSHRARGASNNSYKSKSALPDHAGENCVQKNKTRPNSSNEICSLNV-SDDHE 291
+ + + R S + N S+ + + + + + +SN I SLN+ S
Sbjct: 796 LSSSSSRTISTSSTNEYNTSFHAPTVSSTTSSSSTTSLAANKGVNSNSITSLNLESTSSV 855
Query: 292 SSASLATTKQRSTATL-----DKDVAASSSNIDLYHYLRAPENASVASSVTLNGESETN 453
+S + T ST L V +SS + P +SVA +VT G SET+
Sbjct: 856 TSTAYTTDSVTSTTALTSQGPSSSVVSSSLSSTTSLSTSIPVTSSVAPAVTSTG-SETS 913
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,892,644
Number of Sequences: 5004
Number of extensions: 60100
Number of successful extensions: 279
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 243
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 273
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 325165428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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