Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte4k22
(701 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70754-2|CAC42308.1| 764|Caenorhabditis elegans Hypothetical pr... 52 3e-07
Z70754-1|CAA94771.2| 966|Caenorhabditis elegans Hypothetical pr... 52 3e-07
AF164113-1|AAD45535.1| 810|Caenorhabditis elegans zinc finger p... 52 3e-07
AC006644-6|AAZ91358.1| 958|Caenorhabditis elegans Hypothetical ... 50 2e-06
Z49968-3|CAA90260.1| 189|Caenorhabditis elegans Hypothetical pr... 44 8e-05
AL032647-1|CAA21688.2| 470|Caenorhabditis elegans Hypothetical ... 42 3e-04
AC006624-2|AAF39784.2| 254|Caenorhabditis elegans Hypothetical ... 41 7e-04
Z36948-1|CAA85409.1| 180|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z81037-7|CAB02744.2| 431|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z22179-5|CAA80162.2| 786|Caenorhabditis elegans Hypothetical pr... 37 0.016
Z81491-10|CAB04023.3| 282|Caenorhabditis elegans Hypothetical p... 34 0.086
U97405-1|AAB53007.1| 327|Caenorhabditis elegans Hypothetical pr... 32 0.46
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 32 0.46
Z79603-10|CAI79233.1| 224|Caenorhabditis elegans Hypothetical p... 31 1.1
AC024805-15|AAK39331.2| 344|Caenorhabditis elegans Hypothetical... 29 2.4
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 29 3.2
Z78018-7|CAB01449.2| 2577|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z78013-10|CAB01427.2| 2577|Caenorhabditis elegans Hypothetical p... 29 4.3
AY314773-1|AAQ84880.1| 2596|Caenorhabditis elegans flamingo-like... 29 4.3
Z75536-2|CAA99830.2| 4171|Caenorhabditis elegans Hypothetical pr... 28 5.6
AC024776-5|AAK68470.3| 1090|Caenorhabditis elegans Nuclear pore ... 28 5.6
Z81071-6|CAB03010.1| 464|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p... 28 7.4
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 28 7.4
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p... 28 7.4
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z49068-5|CAA88863.2| 707|Caenorhabditis elegans Hypothetical pr... 28 7.4
X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein. 28 7.4
U13642-8|AAG00040.1| 428|Caenorhabditis elegans Similar to tran... 28 7.4
U13642-7|AAZ32791.1| 446|Caenorhabditis elegans Similar to tran... 28 7.4
AL034392-4|CAA22307.2| 203|Caenorhabditis elegans Hypothetical ... 28 7.4
AF099915-8|AAC68768.2| 231|Caenorhabditis elegans Hypothetical ... 28 7.4
AF022982-8|AAB69934.1| 234|Caenorhabditis elegans Hypothetical ... 28 7.4
AC024880-9|AAK85515.1| 446|Caenorhabditis elegans Hypothetical ... 28 7.4
Z98866-23|CAB11557.2| 399|Caenorhabditis elegans Hypothetical p... 27 9.8
U21308-2|AAB93313.3| 507|Caenorhabditis elegans Hypothetical pr... 27 9.8
AC084159-15|AAK39353.1| 418|Caenorhabditis elegans Hypothetical... 27 9.8
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e... 27 9.8
>Z70754-2|CAC42308.1| 764|Caenorhabditis elegans Hypothetical
protein F58E6.1b protein.
Length = 764
Score = 52.4 bits (120), Expect = 3e-07
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +1
Query: 463 NDSLVSQHRIKVRSPKR-CAPTIDDTEQAEGRSLDAEEMCRICHGAEGALVAACRCRGTV 639
++S +S +V+SP++ P +E + + +CRIC EG +V C C GT+
Sbjct: 13 SNSSLSLASTQVQSPEKPVRPAWLLASFSESTTSGSRRICRICQMHEGDMVRPCDCAGTM 72
Query: 640 GRVHVRCLERWLTEAAKSRC 699
G VH CL +W+ + K C
Sbjct: 73 GDVHEECLTKWVNMSNKKTC 92
>Z70754-1|CAA94771.2| 966|Caenorhabditis elegans Hypothetical
protein F58E6.1a protein.
Length = 966
Score = 52.4 bits (120), Expect = 3e-07
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +1
Query: 463 NDSLVSQHRIKVRSPKR-CAPTIDDTEQAEGRSLDAEEMCRICHGAEGALVAACRCRGTV 639
++S +S +V+SP++ P +E + + +CRIC EG +V C C GT+
Sbjct: 13 SNSSLSLASTQVQSPEKPVRPAWLLASFSESTTSGSRRICRICQMHEGDMVRPCDCAGTM 72
Query: 640 GRVHVRCLERWLTEAAKSRC 699
G VH CL +W+ + K C
Sbjct: 73 GDVHEECLTKWVNMSNKKTC 92
>AF164113-1|AAD45535.1| 810|Caenorhabditis elegans zinc finger
protein STAT-B protein.
Length = 810
Score = 52.4 bits (120), Expect = 3e-07
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +1
Query: 463 NDSLVSQHRIKVRSPKR-CAPTIDDTEQAEGRSLDAEEMCRICHGAEGALVAACRCRGTV 639
++S +S +V+SP++ P +E + + +CRIC EG +V C C GT+
Sbjct: 59 SNSSLSLASTQVQSPEKPVRPAWLLASFSESTTSGSRRICRICQMHEGDMVRPCDCAGTM 118
Query: 640 GRVHVRCLERWLTEAAKSRC 699
G VH CL +W+ + K C
Sbjct: 119 GDVHEECLTKWVNMSNKKTC 138
>AC006644-6|AAZ91358.1| 958|Caenorhabditis elegans Hypothetical
protein F55A3.1 protein.
Length = 958
Score = 49.6 bits (113), Expect = 2e-06
Identities = 20/46 (43%), Positives = 25/46 (54%)
Frame = +1
Query: 562 DAEEMCRICHGAEGALVAACRCRGTVGRVHVRCLERWLTEAAKSRC 699
D MCR+C G EG+L C C G++ VH CL WL + K C
Sbjct: 48 DDHLMCRVCRGNEGSLYYPCLCTGSIKYVHQECLVEWLKYSKKEVC 93
>Z49968-3|CAA90260.1| 189|Caenorhabditis elegans Hypothetical
protein M110.3 protein.
Length = 189
Score = 44.4 bits (100), Expect = 8e-05
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Frame = +1
Query: 541 QAEGRSLDAEEMCRICHGAEG----ALVAACRCRGTVGRVHVRCLERWLTEA 684
+ +G + E+ C+ C G E + V CRCRG++ VH +CL W ++A
Sbjct: 4 EIDGNEQETEKYCKFCFGTESDNALSFVHPCRCRGSIHWVHHQCLAMWFSKA 55
>AL032647-1|CAA21688.2| 470|Caenorhabditis elegans Hypothetical
protein Y57A10B.1 protein.
Length = 470
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Frame = +1
Query: 517 APTIDDTEQAEGRSLDAEEMCRICH-----GAEGALVAACRCRGTVGRVHVRCLERWL 675
+P+ + E +CRICH + L++ CRC G++ VHV CL WL
Sbjct: 174 SPSASSVYSLARSDMSNEPLCRICHCCWPPDSNDPLISPCRCSGSLQYVHVSCLMHWL 231
>AC006624-2|AAF39784.2| 254|Caenorhabditis elegans Hypothetical
protein C53D5.2 protein.
Length = 254
Score = 41.1 bits (92), Expect = 7e-04
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 4/38 (10%)
Frame = +1
Query: 574 MCRICHGAEGA----LVAACRCRGTVGRVHVRCLERWL 675
MCRICH + L++ CRC GT+ VH C+ RWL
Sbjct: 16 MCRICHTSTSTRSNPLISPCRCSGTLLFVHKACVVRWL 53
>Z36948-1|CAA85409.1| 180|Caenorhabditis elegans Hypothetical
protein D2089.2 protein.
Length = 180
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Frame = +1
Query: 574 MCRICHG---AEGALVAACRCRGTVGRVHVRCLERWLTEAAKSRC 699
+CRIC + +L+ C C GTV VH CLE+W+ + +C
Sbjct: 24 ICRICFDNDTSSDSLIKPCSCSGTVAYVHNGCLEQWVRTTSNIQC 68
>Z81037-7|CAB02744.2| 431|Caenorhabditis elegans Hypothetical
protein C17E4.3 protein.
Length = 431
Score = 40.3 bits (90), Expect = 0.001
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 607 LVAACRCRGTVGRVHVRCLERWLTEAAKSRC 699
L++ C+C GT+G H CLE WLT + + C
Sbjct: 34 LISPCKCSGTMGLFHRSCLEHWLTLTSTTNC 64
>Z22179-5|CAA80162.2| 786|Caenorhabditis elegans Hypothetical
protein F58A4.5 protein.
Length = 786
Score = 36.7 bits (81), Expect = 0.016
Identities = 22/92 (23%), Positives = 49/92 (53%)
Frame = +1
Query: 223 QKNKTRPNSSNEICSLNVSDDHESSASLATTKQRSTATLDKDVAASSSNIDLYHYLRAPE 402
+++K NE + +SD+ + SASLA++ ++ ++ KD ++ +N+ A
Sbjct: 212 KESKKDEEDINESMNAALSDERKKSASLASSDKKESS--KKDESSDEANLSASQVANAEM 269
Query: 403 NASVASSVTLNGESETNCKQNDSLVSQHRIKV 498
+AS+++S + E++ + DS + R K+
Sbjct: 270 SASISASSANSSSDESSDEAYDSAEIEMRKKI 301
>Z81491-10|CAB04023.3| 282|Caenorhabditis elegans Hypothetical
protein D1086.6 protein.
Length = 282
Score = 34.3 bits (75), Expect = 0.086
Identities = 33/126 (26%), Positives = 52/126 (41%)
Frame = +1
Query: 202 HAGENCVQKNKTRPNSSNEICSLNVSDDHESSASLATTKQRSTATLDKDVAASSSNIDLY 381
+AG N Q +K P + + S V D ESS S +TT +T T+ + +++N
Sbjct: 117 YAGAN-FQCSKYTPAPT--VTSTTVVDTSESSTSQSTTTPSTTTTIIVS-STTTTNPTTS 172
Query: 382 HYLRAPENASVASSVTLNGESETNCKQNDSLVSQHRIKVRSPKRCAPTIDDTEQAEGRSL 561
P + +S T T+ S+V + +K TID E+AE
Sbjct: 173 TTPTTPTTTTPTTSTTTTARGTTDIPAPPSVVEKWCMKKLQKNNAQFTIDFIEEAESDEG 232
Query: 562 DAEEMC 579
E+C
Sbjct: 233 TNAELC 238
>U97405-1|AAB53007.1| 327|Caenorhabditis elegans Hypothetical
protein T09B4.5a protein.
Length = 327
Score = 31.9 bits (69), Expect = 0.46
Identities = 15/75 (20%), Positives = 35/75 (46%)
Frame = +1
Query: 148 RARGASNNSYKSKSALPDHAGENCVQKNKTRPNSSNEICSLNVSDDHESSASLATTKQRS 327
R+RG N+ + ++ P + + + + + ++ V+DD + + + +QR+
Sbjct: 92 RSRGRPTNASRLSASTPSASSTSVKRSRSVTKTPRDVVKTIEVADDEDEVTTPSRLRQRN 151
Query: 328 TATLDKDVAASSSNI 372
L +D AS S +
Sbjct: 152 VRNLTQDPPASRSRL 166
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 31.9 bits (69), Expect = 0.46
Identities = 19/39 (48%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -2
Query: 685 PPR*ATAPDSARALDP-PCPDSDTQPPALPPRRDRSDTS 572
PPR A A D R + P P P +P PPRRDR D S
Sbjct: 73 PPRGARA-DRDRPMRPSPSPPRRRRPSPSPPRRDRRDRS 110
>Z79603-10|CAI79233.1| 224|Caenorhabditis elegans Hypothetical
protein M163.11 protein.
Length = 224
Score = 30.7 bits (66), Expect = 1.1
Identities = 24/100 (24%), Positives = 43/100 (43%)
Frame = +1
Query: 247 SSNEICSLNVSDDHESSASLATTKQRSTATLDKDVAASSSNIDLYHYLRAPENASVASSV 426
S+ +CS + SD SS++ +T+ STA D ++SSS+ + +S +SS
Sbjct: 34 STCSLCS-DSSDSSSSSSTASTSSSSSTAATSSDDSSSSSSSS------SSSASSTSSSD 86
Query: 427 TLNGESETNCKQNDSLVSQHRIKVRSPKRCAPTIDDTEQA 546
T +S + + S S + S + T +
Sbjct: 87 TTTADSSSTTSSDSSTTSSNSSSSTSSSDSTSVVSSTSSS 126
Score = 30.7 bits (66), Expect = 1.1
Identities = 24/84 (28%), Positives = 40/84 (47%)
Frame = +1
Query: 229 NKTRPNSSNEICSLNVSDDHESSASLATTKQRSTATLDKDVAASSSNIDLYHYLRAPENA 408
+ T SS+ + SDD SS+S +++ ST++ D A SSS +
Sbjct: 49 SSTASTSSSSSTAATSSDDSSSSSSSSSSSASSTSSSDTTTADSSST-----------TS 97
Query: 409 SVASSVTLNGESETNCKQNDSLVS 480
S +S+ + N S T+ + S+VS
Sbjct: 98 SDSSTTSSNSSSSTSSSDSTSVVS 121
>AC024805-15|AAK39331.2| 344|Caenorhabditis elegans Hypothetical
protein Y51H7C.13 protein.
Length = 344
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/42 (30%), Positives = 17/42 (40%)
Frame = -2
Query: 673 ATAPDSARALDPPCPDSDTQPPALPPRRDRSDTSPLHRATCP 548
A P + PP P PP +PP + T+ R CP
Sbjct: 113 AVVPPAVSGTSPPAPVDQKPPPCIPPTTTTTTTTTT-RPPCP 153
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 29.1 bits (62), Expect = 3.2
Identities = 18/51 (35%), Positives = 20/51 (39%)
Frame = +3
Query: 534 HRTSRGQVARCRGDVSDLSRRGGSAGGCVSLSGHGGSSARALSGAVAHRGG 686
HR G RG R GS GG GHGG +R+ S H G
Sbjct: 225 HRGRSGSPGGRRGHGGRHGSRSGSPGGRHGHGGHGGHGSRSGSPGGRHGHG 275
>Z78018-7|CAB01449.2| 2577|Caenorhabditis elegans Hypothetical
protein F15B9.7 protein.
Length = 2577
Score = 28.7 bits (61), Expect = 4.3
Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Frame = +1
Query: 352 AASSSNIDLYHYLRAPENASVASSVTLN---GESETNCKQNDSLVSQHRIKVRSPKRCAP 522
A+ +S+ LY+ + AP+++ + TL+ GE + ++ +H +KV + +R P
Sbjct: 189 ASHASSQPLYYSMVAPQDSRSQNLFTLDTMSGEIRLAKSMDREVLDKHILKVTAYERVDP 248
Query: 523 TIDDTEQAEGRSLDAEE 573
TI + LD ++
Sbjct: 249 TISASTTVVVHVLDVQD 265
>Z78013-10|CAB01427.2| 2577|Caenorhabditis elegans Hypothetical
protein F15B9.7 protein.
Length = 2577
Score = 28.7 bits (61), Expect = 4.3
Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Frame = +1
Query: 352 AASSSNIDLYHYLRAPENASVASSVTLN---GESETNCKQNDSLVSQHRIKVRSPKRCAP 522
A+ +S+ LY+ + AP+++ + TL+ GE + ++ +H +KV + +R P
Sbjct: 189 ASHASSQPLYYSMVAPQDSRSQNLFTLDTMSGEIRLAKSMDREVLDKHILKVTAYERVDP 248
Query: 523 TIDDTEQAEGRSLDAEE 573
TI + LD ++
Sbjct: 249 TISASTTVVVHVLDVQD 265
>AY314773-1|AAQ84880.1| 2596|Caenorhabditis elegans flamingo-like
protein FMI-1 protein.
Length = 2596
Score = 28.7 bits (61), Expect = 4.3
Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Frame = +1
Query: 352 AASSSNIDLYHYLRAPENASVASSVTLN---GESETNCKQNDSLVSQHRIKVRSPKRCAP 522
A+ +S+ LY+ + AP+++ + TL+ GE + ++ +H +KV + +R P
Sbjct: 189 ASHASSQPLYYSMVAPQDSRSQNLFTLDTMSGEIRLAKSMDREVLDKHILKVTAYERVDP 248
Query: 523 TIDDTEQAEGRSLDAEE 573
TI + LD ++
Sbjct: 249 TISASTTVVVHVLDVQD 265
>Z75536-2|CAA99830.2| 4171|Caenorhabditis elegans Hypothetical protein
F18C12.1 protein.
Length = 4171
Score = 28.3 bits (60), Expect = 5.6
Identities = 23/81 (28%), Positives = 35/81 (43%)
Frame = +2
Query: 74 FRVKCRTRGDADSPCKMIHNDRSLTERGAPPITATNRSPRSPTMPEKIVYKRTRHVLTVP 253
FR+ T GDA P M+ +T PP N R+ T + + T++V+T
Sbjct: 3688 FRLWLTTEGDARFPSMMLQQSLKITFE--PPPGVRNNLLRTYTQ----IDRSTKNVITCQ 3741
Query: 254 MRFVL*MCPTTTRARRLSLPR 316
FVL + RR +P+
Sbjct: 3742 SIFVLAWLHALLQERRTFIPQ 3762
>AC024776-5|AAK68470.3| 1090|Caenorhabditis elegans Nuclear pore
complex protein protein8, isoform b protein.
Length = 1090
Score = 28.3 bits (60), Expect = 5.6
Identities = 20/81 (24%), Positives = 39/81 (48%)
Frame = +1
Query: 325 STATLDKDVAASSSNIDLYHYLRAPENASVASSVTLNGESETNCKQNDSLVSQHRIKVRS 504
S A +D+ + + I LY APE L+ + T+ NDS +++ R ++++
Sbjct: 459 SDAPIDERIRGKAEQI-LYSLKEAPEIVENEQQRMLDQSTTTSWSPNDSSMAEWRHRMKT 517
Query: 505 PKRCAPTIDDTEQAEGRSLDA 567
P + T + +GR+ +A
Sbjct: 518 -----PLLSSTPRTDGRNGNA 533
>Z81071-6|CAB03010.1| 464|Caenorhabditis elegans Hypothetical
protein F28F8.7 protein.
Length = 464
Score = 27.9 bits (59), Expect = 7.4
Identities = 20/78 (25%), Positives = 29/78 (37%)
Frame = +1
Query: 214 NCVQKNKTRPNSSNEICSLNVSDDHESSASLATTKQRSTATLDKDVAASSSNIDLYHYLR 393
N K R NSS+ +CS S S + QR+ T + S + + L + +
Sbjct: 75 NIKNVKKVRKNSSDSVCSSKKSGKQASVDQVPPLLQRALCTKSRSPKNSENFLYLENAVG 134
Query: 394 APENASVASSVTLNGESE 447
A V L G E
Sbjct: 135 REHQAHVGPFKKLRGRDE 152
>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 27.9 bits (59), Expect = 7.4
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2
Query: 56 KKNKYKFRVKCRTRGDADSPCKM 124
K N+Y+FRV+ T+ PC++
Sbjct: 4767 KDNRYRFRVRAETQYGVSEPCEL 4789
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 27.9 bits (59), Expect = 7.4
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2
Query: 56 KKNKYKFRVKCRTRGDADSPCKM 124
K N+Y+FRV+ T+ PC++
Sbjct: 5296 KDNRYRFRVRAETQYGVSEPCEL 5318
>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 27.9 bits (59), Expect = 7.4
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2
Query: 56 KKNKYKFRVKCRTRGDADSPCKM 124
K N+Y+FRV+ T+ PC++
Sbjct: 4977 KDNRYRFRVRAETQYGVSEPCEL 4999
>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical protein
ZK617.1c protein.
Length = 6629
Score = 27.9 bits (59), Expect = 7.4
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2
Query: 56 KKNKYKFRVKCRTRGDADSPCKM 124
K N+Y+FRV+ T+ PC++
Sbjct: 4767 KDNRYRFRVRAETQYGVSEPCEL 4789
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical protein
ZK617.1b protein.
Length = 7158
Score = 27.9 bits (59), Expect = 7.4
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2
Query: 56 KKNKYKFRVKCRTRGDADSPCKM 124
K N+Y+FRV+ T+ PC++
Sbjct: 5296 KDNRYRFRVRAETQYGVSEPCEL 5318
>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical protein
ZK617.1a protein.
Length = 6839
Score = 27.9 bits (59), Expect = 7.4
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2
Query: 56 KKNKYKFRVKCRTRGDADSPCKM 124
K N+Y+FRV+ T+ PC++
Sbjct: 4977 KDNRYRFRVRAETQYGVSEPCEL 4999
>Z49068-5|CAA88863.2| 707|Caenorhabditis elegans Hypothetical
protein K01C8.5 protein.
Length = 707
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/40 (27%), Positives = 24/40 (60%)
Frame = +1
Query: 328 TATLDKDVAASSSNIDLYHYLRAPENASVASSVTLNGESE 447
++ + +DV SS I + ++ PE+ +V + ++ +GE E
Sbjct: 534 SSPISEDVFKSSDRITMPSTIKGPESTAVGNRISSDGEEE 573
>X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein.
Length = 6048
Score = 27.9 bits (59), Expect = 7.4
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2
Query: 56 KKNKYKFRVKCRTRGDADSPCKM 124
K N+Y+FRV+ T+ PC++
Sbjct: 4186 KDNRYRFRVRAETQYGVSEPCEL 4208
>U13642-8|AAG00040.1| 428|Caenorhabditis elegans Similar to
transporter of divalentcations protein 1, isoform a
protein.
Length = 428
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = -1
Query: 476 TKLSFCLQFVSLSPFRVTELATEAFSGAL 390
T SFC QF SL +TE T FS L
Sbjct: 52 TIFSFCSQFASLYSMSITEKPTHKFSYGL 80
>U13642-7|AAZ32791.1| 446|Caenorhabditis elegans Similar to
transporter of divalentcations protein 1, isoform b
protein.
Length = 446
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = -1
Query: 476 TKLSFCLQFVSLSPFRVTELATEAFSGAL 390
T SFC QF SL +TE T FS L
Sbjct: 70 TIFSFCSQFASLYSMSITEKPTHKFSYGL 98
>AL034392-4|CAA22307.2| 203|Caenorhabditis elegans Hypothetical
protein Y40B1A.4 protein.
Length = 203
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +1
Query: 502 SPKRCAPTIDDTEQAEGRSLDAEEMCRICH 591
+PKRCA T + Q R D + ICH
Sbjct: 81 APKRCACTCPNCLQQNNRQGDGKSRIHICH 110
>AF099915-8|AAC68768.2| 231|Caenorhabditis elegans Hypothetical
protein E02H9.2 protein.
Length = 231
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = +2
Query: 92 TRGDADSPCKMI-HNDRSLTERGAPPITATNRSPRSPTMPEK 214
T G+ S C HN+ L GAP T T +P+ P K
Sbjct: 169 TYGEPGSACDPDRHNNDGLCSLGAPTTTTTTTTPKPPPATPK 210
>AF022982-8|AAB69934.1| 234|Caenorhabditis elegans Hypothetical
protein T23B12.1 protein.
Length = 234
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = +1
Query: 508 KRCAPTIDDTEQAEGRSLDAEEMCRICHGAE--GALVAAC-RCR 630
K+ P IDD+ +E+ C +CHG G V AC RCR
Sbjct: 132 KKLVPVIDDSIYCT-----SEQPCAVCHGVSLAGNQVLACRRCR 170
>AC024880-9|AAK85515.1| 446|Caenorhabditis elegans Hypothetical
protein Y97E10AR.6 protein.
Length = 446
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +1
Query: 124 DTQRPKSHRARGASNNSYKSKSALPDHAGENCVQKNKTRPNSSN-EICS 267
DT+ PK + +G+S S SK + P V + T P+ S +CS
Sbjct: 363 DTKSPKKSKRKGSSGTS--SKKSSPSSESSVVVVEEPTSPSQSEWSVCS 409
>Z98866-23|CAB11557.2| 399|Caenorhabditis elegans Hypothetical
protein Y49E10.24 protein.
Length = 399
Score = 27.5 bits (58), Expect = 9.8
Identities = 16/56 (28%), Positives = 23/56 (41%)
Frame = +2
Query: 71 KFRVKCRTRGDADSPCKMIHNDRSLTERGAPPITATNRSPRSPTMPEKIVYKRTRH 238
K VKCR R + C +I G+ P+ + PR+PT E + H
Sbjct: 303 KLHVKCRMRNTVKAECPIII--------GSKPLADEHVDPRTPTYQEVATFSALTH 350
>U21308-2|AAB93313.3| 507|Caenorhabditis elegans Hypothetical
protein ZK1290.6 protein.
Length = 507
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +3
Query: 597 GGSAGGCVSLSGHGGSSARALSGAVAHRG 683
GG GG S GHGGS + G +H G
Sbjct: 47 GGKGGGGGSHGGHGGSHGGSHGGHGSHGG 75
>AC084159-15|AAK39353.1| 418|Caenorhabditis elegans Hypothetical
protein Y73B3A.13 protein.
Length = 418
Score = 27.5 bits (58), Expect = 9.8
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = +1
Query: 214 NCVQKNKTRPNSSNEICSLNVSDDHESSASLATTKQRSTATLDKDVAASSSNIDLYHYL 390
N + K R NSS+ +CS S + S + QR+ T + SS N + + YL
Sbjct: 75 NIKKVKKVRKNSSDSVCSSKKSGEQASVDQVPPPLQRALCTKSR----SSKNSENFLYL 129
>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of efl-1
mutant phenotypeprotein 1 protein.
Length = 4177
Score = 27.5 bits (58), Expect = 9.8
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 4/93 (4%)
Frame = +1
Query: 292 SSASLATTKQRSTATLDKDVAASSSNIDLYHYLRAPENASVASSVTLNGE----SETNCK 459
S+A A+T S + +SSS+ + + RA + S+ S LNGE +T
Sbjct: 2035 STAGGASTSSSSAPPPPPPLTSSSSHTVVENNSRAEKIVSMMLSEVLNGEFPTVGQTRML 2094
Query: 460 QNDSLVSQHRIKVRSPKRCAPTIDDTEQAEGRS 558
+ ++ V+S A I +T QAEGRS
Sbjct: 2095 SQEKILQILAEIVKSYPSLAIIIAET-QAEGRS 2126
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,793,140
Number of Sequences: 27780
Number of extensions: 374701
Number of successful extensions: 1927
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1566
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1916
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -