Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte4k22
(701 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 25 0.70
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 25 0.70
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 25 0.70
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 25 0.70
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 25 0.70
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 25 0.70
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 25 0.70
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 25 0.70
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 24 1.6
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 23 2.1
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 23 2.1
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 23 2.8
AB201717-1|BAD90662.1| 107|Apis mellifera apime-corazonin prepr... 22 4.9
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 21 8.6
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 21 8.6
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 8.6
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 8.6
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.0 bits (52), Expect = 0.70
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +1
Query: 58 KKQI*ISCEMPNTRRRRFSVQNDTQRPKSHRARGASNNS 174
KK++ + E+ R ++ S ++ ++ P+S ASN S
Sbjct: 56 KKKMILEYELRRAREKKLSKRSKSRSPESRGRSNASNTS 94
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.0 bits (52), Expect = 0.70
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +1
Query: 58 KKQI*ISCEMPNTRRRRFSVQNDTQRPKSHRARGASNNS 174
KK++ + E+ R ++ S ++ ++ P+S ASN S
Sbjct: 56 KKKMILEYELRRAREKKLSKRSKSRSPESRGRSNASNTS 94
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.0 bits (52), Expect = 0.70
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +1
Query: 58 KKQI*ISCEMPNTRRRRFSVQNDTQRPKSHRARGASNNS 174
KK++ + E+ R ++ S ++ ++ P+S ASN S
Sbjct: 56 KKKMILEYELRRAREKKLSKRSKSRSPESRGRSNASNTS 94
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.0 bits (52), Expect = 0.70
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +1
Query: 58 KKQI*ISCEMPNTRRRRFSVQNDTQRPKSHRARGASNNS 174
KK++ + E+ R ++ S ++ ++ P+S ASN S
Sbjct: 56 KKKMILEYELRRAREKKLSKRSKSRSPESRGRSNASNTS 94
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.0 bits (52), Expect = 0.70
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +1
Query: 58 KKQI*ISCEMPNTRRRRFSVQNDTQRPKSHRARGASNNS 174
KK++ + E+ R ++ S ++ ++ P+S ASN S
Sbjct: 56 KKKMILEYELRRAREKKLSKRSKSRSPESRGRSNASNTS 94
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.0 bits (52), Expect = 0.70
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +1
Query: 58 KKQI*ISCEMPNTRRRRFSVQNDTQRPKSHRARGASNNS 174
KK++ + E+ R ++ S ++ ++ P+S ASN S
Sbjct: 56 KKKMILEYELRRAREKKLSKRSKSRSPESRGRSNASNTS 94
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 25.0 bits (52), Expect = 0.70
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +1
Query: 58 KKQI*ISCEMPNTRRRRFSVQNDTQRPKSHRARGASNNS 174
KK++ + E+ R ++ S ++ ++ P+S ASN S
Sbjct: 56 KKKMILEYELRRAREKKLSKRSKSRSPESRGRSNASNTS 94
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 25.0 bits (52), Expect = 0.70
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +1
Query: 58 KKQI*ISCEMPNTRRRRFSVQNDTQRPKSHRARGASNNS 174
KK++ + E+ R ++ S ++ ++ P+S ASN S
Sbjct: 56 KKKMILEYELRRAREKKLSKRSKSRSPESRGRSNASNTS 94
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 23.8 bits (49), Expect = 1.6
Identities = 9/28 (32%), Positives = 18/28 (64%)
Frame = +1
Query: 484 HRIKVRSPKRCAPTIDDTEQAEGRSLDA 567
HR+ + +PK+ PT ++++ +LDA
Sbjct: 449 HRLGIDTPKKDGPTKSWSDESLNNALDA 476
Score = 21.8 bits (44), Expect = 6.5
Identities = 10/29 (34%), Positives = 12/29 (41%)
Frame = +2
Query: 152 RGAPPITATNRSPRSPTMPEKIVYKRTRH 238
R PP + + PR P P K RH
Sbjct: 127 RDGPPSVSLSSPPREPGTPRINFTKLKRH 155
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 23.4 bits (48), Expect = 2.1
Identities = 7/22 (31%), Positives = 10/22 (45%)
Frame = +2
Query: 605 RWWLRVAVGARWVECTCAVWSG 670
RW L + W+ C +W G
Sbjct: 206 RWELAGTLAVVWIMCYFCIWKG 227
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 23.4 bits (48), Expect = 2.1
Identities = 7/22 (31%), Positives = 10/22 (45%)
Frame = +2
Query: 605 RWWLRVAVGARWVECTCAVWSG 670
RW L + W+ C +W G
Sbjct: 259 RWELAGTLAVVWIMCYFCIWKG 280
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 23.0 bits (47), Expect = 2.8
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +2
Query: 500 GVPRDAHQLLTTQNKQRAGRSMQR 571
G+PRD + +N+Q+ S Q+
Sbjct: 1295 GIPRDQRAMTEARNQQQQASSQQQ 1318
>AB201717-1|BAD90662.1| 107|Apis mellifera apime-corazonin
preprohormone protein.
Length = 107
Score = 22.2 bits (45), Expect = 4.9
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -2
Query: 430 ELLSWPQRRFPEPLGND 380
ELL++P+R F E + ND
Sbjct: 80 ELLNFPKRSFSENMIND 96
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 21.4 bits (43), Expect = 8.6
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -3
Query: 288 VVVGHIQRTNLIGTVRTCLVL 226
V+ I T L+G V TC+V+
Sbjct: 58 VIYAVIFVTGLVGNVSTCVVI 78
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 21.4 bits (43), Expect = 8.6
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = -2
Query: 628 DSDTQPPALPPRRDRSDTSP 569
DSDT P PP S + P
Sbjct: 334 DSDTPPKPAPPPPPPSSSGP 353
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.4 bits (43), Expect = 8.6
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +3
Query: 597 GGSAGGCVSLSGHGGSSARALSG 665
GGS G L G GG++ + +G
Sbjct: 1707 GGSLAGLGGLGGLGGAAEASAAG 1729
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.4 bits (43), Expect = 8.6
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +3
Query: 597 GGSAGGCVSLSGHGGSSARALSG 665
GGS G L G GG++ + +G
Sbjct: 1703 GGSLAGLGGLGGLGGAAEASAAG 1725
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,208
Number of Sequences: 438
Number of extensions: 5071
Number of successful extensions: 32
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21561255
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -