BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte4k18
(708 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubu... 26 1.0
DQ974163-1|ABJ52803.1| 595|Anopheles gambiae serpin 4B protein. 24 5.4
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc... 23 7.1
DQ974164-1|ABJ52804.1| 410|Anopheles gambiae serpin 4C protein. 23 7.1
X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein. 23 9.4
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 23 9.4
AF080566-1|AAC31946.1| 308|Anopheles gambiae abdominal-A homeot... 23 9.4
>AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubule
binding protein protein.
Length = 838
Score = 26.2 bits (55), Expect = 1.0
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -2
Query: 551 SPAPIVPGVVRTATPQFPFNPP 486
S AP+VP V TA P P PP
Sbjct: 89 SLAPVVPSSVVTAPPARPSQPP 110
>DQ974163-1|ABJ52803.1| 595|Anopheles gambiae serpin 4B protein.
Length = 595
Score = 23.8 bits (49), Expect = 5.4
Identities = 9/22 (40%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
Frame = -2
Query: 371 CDRLSNDDEDQEDP-VDAQKSS 309
C+R ++D+ED+ED +++Q S
Sbjct: 122 CNRYNDDEEDEEDDFINSQSPS 143
>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated
calcium channel alpha1 subunit protein.
Length = 1893
Score = 23.4 bits (48), Expect = 7.1
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1
Query: 10 DNDLSARTIRTKSKCPRRNLS 72
D +L TIR++ CP N+S
Sbjct: 10 DTELVNSTIRSEVTCPNHNIS 30
>DQ974164-1|ABJ52804.1| 410|Anopheles gambiae serpin 4C protein.
Length = 410
Score = 23.4 bits (48), Expect = 7.1
Identities = 9/22 (40%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Frame = -2
Query: 371 CDRLSNDDEDQEDP-VDAQKSS 309
C+R + D+ED+ED +++Q S
Sbjct: 13 CNRYNEDEEDEEDDFINSQSPS 34
>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
Length = 1231
Score = 23.0 bits (47), Expect = 9.4
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = -3
Query: 403 SPSTNTKINVAAIACPTMMRIRKIP*MPRSPRLSLLAPHHPQNATIITNRPS 248
+P+TN +I + PT +IRK+ +P+ + P A ++ RP+
Sbjct: 550 APTTNPRI----VPIPTFPQIRKLSFVPKMKSRACFGYVGPIIAALVLFRPA 597
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 23.0 bits (47), Expect = 9.4
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +2
Query: 314 TSGHLRDLPDPHHRWTS 364
T GH P PHH TS
Sbjct: 709 TGGHHLASPSPHHHLTS 725
>AF080566-1|AAC31946.1| 308|Anopheles gambiae abdominal-A homeotic
protein protein.
Length = 308
Score = 23.0 bits (47), Expect = 9.4
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -2
Query: 284 SAKRHHHNKQTQQD 243
SA++HH KQ QQ+
Sbjct: 224 SAQQHHSQKQAQQE 237
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 667,521
Number of Sequences: 2352
Number of extensions: 11953
Number of successful extensions: 26
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72340815
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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