Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte4k18
(708 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132948-5|CAC51071.1| 321|Caenorhabditis elegans Hypothetical ... 51 7e-07
Z68880-6|CAA93092.1| 308|Caenorhabditis elegans Hypothetical pr... 44 1e-04
U41028-2|AAA82355.1| 233|Caenorhabditis elegans Tetraspanin fam... 40 0.002
U28740-6|AAA68322.4| 317|Caenorhabditis elegans Tetraspanin fam... 36 0.038
Z92824-4|CAB07307.2| 395|Caenorhabditis elegans B0413.2 protein. 35 0.050
AL021487-1|CAA16352.4| 241|Caenorhabditis elegans Hypothetical ... 34 0.11
Z93385-7|CAN86625.1| 556|Caenorhabditis elegans Hypothetical pr... 32 0.46
AC024763-7|AAF60517.1| 304|Caenorhabditis elegans Pdgf/vegf gro... 30 1.4
Z67734-1|CAA91527.2| 279|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z93385-8|CAN86626.1| 560|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z93385-6|CAB07641.1| 558|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z73908-1|CAA98130.2| 230|Caenorhabditis elegans Hypothetical pr... 29 3.3
AF038609-6|AAK29795.1| 245|Caenorhabditis elegans Hypothetical ... 29 3.3
Z78415-6|CAH60758.1| 291|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z82282-4|CAB05276.1| 485|Caenorhabditis elegans Hypothetical pr... 28 5.7
AY373340-1|AAQ76550.1| 1007|Caenorhabditis elegans BAM-2 protein. 27 9.9
AC024853-1|AAO21419.1| 1007|Caenorhabditis elegans Branching abn... 27 9.9
>AL132948-5|CAC51071.1| 321|Caenorhabditis elegans Hypothetical
protein Y39B6A.6 protein.
Length = 321
Score = 51.2 bits (117), Expect = 7e-07
Identities = 38/171 (22%), Positives = 67/171 (39%), Gaps = 7/171 (4%)
Frame = +3
Query: 81 LYVVNVIYAVFGLVTAATGIWFFVQLAEFVSLRNSNHYLLDYRVYWPQVAPWLF------ 242
++ N+++ + G + A G+W + F + + + +W AP LF
Sbjct: 61 IFTANIVFLIVGGLLLAMGVWLRTD-SRFRNFISERYRQAVQEAFWE--APTLFAFSYII 117
Query: 243 ILLGLFVMMVAFCGWCGANKESRXXXXXXXXXXXXXXXXQAIAATLIFVFVDGEDTDRFI 422
I+LG +M+VA G CG SR + DG D + +
Sbjct: 118 IVLGAVMMVVAMLGCCGITGRSRPFLIIYSMVVFLLLVATLSCGIYLLYKKDGLDVE--L 175
Query: 423 KDTVYDGYYNSQSNPDVFK-AFGRIERKLRCCGANDARDYRSWRNDLPLTC 572
D + + P V + + ++ RCCG D+R +R D+P +C
Sbjct: 176 SDALNYMVQHYYQGPGVVQESLDHLQTAFRCCGNAGCSDFRVFRQDIPRSC 226
>Z68880-6|CAA93092.1| 308|Caenorhabditis elegans Hypothetical
protein T14G10.6 protein.
Length = 308
Score = 44.0 bits (99), Expect = 1e-04
Identities = 31/158 (19%), Positives = 64/158 (40%), Gaps = 1/158 (0%)
Frame = +3
Query: 69 IKGVLYVVNVIYAVFGLVTAATGIWFFVQLAEFVS-LRNSNHYLLDYRVYWPQVAPWLFI 245
+K ++ NVI+ + G G+W ++ FV+ L ++ LD W +
Sbjct: 38 VKYSVFSFNVIFFLLGFGLLLFGVWAQIEKNTFVNMLSKASKLYLD--------PTWPLL 89
Query: 246 LLGLFVMMVAFCGWCGANKESRXXXXXXXXXXXXXXXXQAIAATLIFVFVDGEDTDRFIK 425
++G ++ F G G+ +E+ + A +F + + D +I+
Sbjct: 90 IVGFLTFIIGFSGCVGSLRENTSFLTFYSTLLGLLLIAEFSAG--VFAYACRDQLDNYIR 147
Query: 426 DTVYDGYYNSQSNPDVFKAFGRIERKLRCCGANDARDY 539
+ + D + +PD+ ++ CCG N A D+
Sbjct: 148 NLLNDVVVGYRDDPDLQLLIDSMQETWMCCGINGADDW 185
>U41028-2|AAA82355.1| 233|Caenorhabditis elegans Tetraspanin family
protein 9 protein.
Length = 233
Score = 39.9 bits (89), Expect = 0.002
Identities = 35/157 (22%), Positives = 63/157 (40%), Gaps = 6/157 (3%)
Frame = +3
Query: 69 IKGVLYVVNVIYAVFGLVTAATGIW------FFVQLAEFVSLRNSNHYLLDYRVYWPQVA 230
IK + +V+N +FG + +W F L++FV L + Q +
Sbjct: 8 IKLLFFVINFFICIFGALICGFSLWANLDKNFGSHLSDFVRQIEGIDQKLVNEIAEYQAS 67
Query: 231 PWLFILLGLFVMMVAFCGWCGANKESRXXXXXXXXXXXXXXXXQAIAATLIFVFVDGEDT 410
W+ + +G + +V F G CGA ES + + AT +F + E+
Sbjct: 68 LWILVAVGALLFLVGFFGCCGAGCESPVLLGLFIFIIVILTAVE-LGAT-VFAMTNREE- 124
Query: 411 DRFIKDTVYDGYYNSQSNPDVFKAFGRIERKLRCCGA 521
F+ ++ S + ++ K I+ +CCGA
Sbjct: 125 --FV-SSIQQVLKKSSATYELRKNIKPIQNVFQCCGA 158
>U28740-6|AAA68322.4| 317|Caenorhabditis elegans Tetraspanin family
protein 11 protein.
Length = 317
Score = 35.5 bits (78), Expect = 0.038
Identities = 55/236 (23%), Positives = 96/236 (40%), Gaps = 33/236 (13%)
Frame = +3
Query: 69 IKGVLYVVNVIYAVFGLVTAATGIW-----FFVQLAEFVSLR----NSNHYLLDYRVYWP 221
+K L++ N+++ + GL+ G+W + + F + + + + L D
Sbjct: 18 LKFSLFIFNLVFLLCGLICLGIGLWLVLDKYAIDNLAFATAKVQGYDQDAGLRDLATKPT 77
Query: 222 QVAPWLFILL--GLFVMMVAFCGWCGANKESRXXXXXXXXXXXXXXXXQAIAATLIFVFV 395
V + ++L G V++VAF G CGA KE R Q IAAT I+ F+
Sbjct: 78 AVRQFGYLLFVGGFIVIVVAFLGCCGAAKEWRPLLCCYSSCLMLILAIQ-IAAT-IYAFL 135
Query: 396 DGEDTDRFIKD------TVYDGYYNSQ--SNPD----VFKAFGRIERKLRCCGA------ 521
+ +D +Y+G N + +NP V A+ +I + CCG
Sbjct: 136 HSHMFENDFRDILHSSLKMYNGTDNMKVSNNPQDGLLVKTAWDKIMIEKSCCGVDSKIGE 195
Query: 522 -NDARDYR--SWRNDLPLTCCLDSYYRASCDFTDKEANERLGC-AKVASVYTKIIS 677
N++ Y+ R P CC + + + GC AK+A + ++ S
Sbjct: 196 FNNSGWYQLNHGRYQFPPACCPPDEHGRLRPYCNTIMRHSHGCYAKIAESFEEVTS 251
>Z92824-4|CAB07307.2| 395|Caenorhabditis elegans B0413.2 protein.
Length = 395
Score = 35.1 bits (77), Expect = 0.050
Identities = 19/81 (23%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Frame = +3
Query: 81 LYVVNVIYAVFGLVTAATGIWFFVQLAEFVSLRNSNHYLLDYRVYWPQVAPWLF----IL 248
++ N+++ + G + A G+W + F + + + +W + F I+
Sbjct: 172 IFTANIVFLIVGGLXLAMGVWLRTD-SRFRNFISERYRQAVQEAFWEAPTXFAFSYIXIV 230
Query: 249 LGLFVMMVAFCGWCGANKESR 311
LG +M+VA G CG SR
Sbjct: 231 LGAVMMVVAMXGCCGITGRSR 251
>AL021487-1|CAA16352.4| 241|Caenorhabditis elegans Hypothetical
protein Y45F10B.1 protein.
Length = 241
Score = 33.9 bits (74), Expect = 0.11
Identities = 35/174 (20%), Positives = 68/174 (39%), Gaps = 4/174 (2%)
Frame = +3
Query: 63 ELIKGVLYVVNVIYAVFGLVTAATGIWFFVQLAEFVSLRNSNHYLLDY-RVYWPQVAPWL 239
+L + +++N+ V G++ IW + E R S LL + V +
Sbjct: 8 KLANFLFFILNLGLIVVGVIITWYSIWMVLHQFEVTVARTSLVNLLSVDNIECFYVYRTI 67
Query: 240 FILLGLFVMMVAFCGWCGANKESRXXXXXXXXXXXXXXXXQAIAATLIFVFVDGEDTDRF 419
I++G ++++ FCG S+ + I A ++F+ + F
Sbjct: 68 SIMIGGCMVVLGFCGCFAVGFGSKTALSVHLVLVFIVFVVK-IVAIVMFLANNDHLRREF 126
Query: 420 I---KDTVYDGYYNSQSNPDVFKAFGRIERKLRCCGANDARDYRSWRNDLPLTC 572
+ +D + Y+N+ + + L+CCGAN D+ N P +C
Sbjct: 127 VGVYRDELVANYHNNSRTKNTLDW---VHTSLKCCGANGCEDFLPAGN-FPTSC 176
>Z93385-7|CAN86625.1| 556|Caenorhabditis elegans Hypothetical
protein M01E5.3b protein.
Length = 556
Score = 31.9 bits (69), Expect = 0.46
Identities = 24/90 (26%), Positives = 35/90 (38%), Gaps = 1/90 (1%)
Frame = -2
Query: 365 RLSNDDEDQEDPVDAQKSSALFVSAAPSAKRHHHNKQT-QQDEEPWRDLWPXXXXXXXXX 189
R+ + EDQ+ D Q + + V A + R H N Q QQ EP + +
Sbjct: 398 RMRQNQEDQQYYYDQQPPNLMVVGTAHAHYRRHMNAQAHQQQREPSWNNFANAPPAIIQR 457
Query: 188 XXVSETDELG*LHKEPYPGRGGD*TENSVD 99
+ G EP R GD + +S D
Sbjct: 458 NLDAPAPMFGVAVNEPQVQRNGDDSNDSTD 487
>AC024763-7|AAF60517.1| 304|Caenorhabditis elegans Pdgf/vegf growth
factor relatedprotein 1 protein.
Length = 304
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +2
Query: 8 STTI*ARGRYERNQNVQGGTYQRSVVRCQCDLRC 109
S T + ERN V T+ +C+CDL+C
Sbjct: 215 SCTCECANKEERNNCVGNATWNAETCKCECDLKC 248
>Z67734-1|CAA91527.2| 279|Caenorhabditis elegans Hypothetical
protein B0198.1 protein.
Length = 279
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = +3
Query: 450 NSQSNPDVFKAFGRIERKLRCCGANDARDYRSWRND---LPLTCCLDSYYRASCDFTDKE 620
N +P++ KA ++R +CCG+N D+ + LP + + D K
Sbjct: 139 NYNLDPNIAKAVNYLQRDSKCCGSNAFNDWPKPEVEDHYLPYAKTVVQRVQYIPDSCCKS 198
Query: 621 ANERLGCA 644
++R GCA
Sbjct: 199 THQRKGCA 206
>Z93385-8|CAN86626.1| 560|Caenorhabditis elegans Hypothetical
protein M01E5.3c protein.
Length = 560
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = -2
Query: 365 RLSNDDEDQEDPVDAQKSSALFVSAAPSAKRHHHNKQT-QQDEEP-WRD 225
R+ + EDQ+ D Q + + V A + R H N Q QQ EP W +
Sbjct: 398 RMRQNQEDQQYYYDQQPPNLMVVGTAHAHYRRHMNAQAHQQQREPSWNN 446
>Z93385-6|CAB07641.1| 558|Caenorhabditis elegans Hypothetical
protein M01E5.3a protein.
Length = 558
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = -2
Query: 365 RLSNDDEDQEDPVDAQKSSALFVSAAPSAKRHHHNKQT-QQDEEP-WRD 225
R+ + EDQ+ D Q + + V A + R H N Q QQ EP W +
Sbjct: 398 RMRQNQEDQQYYYDQQPPNLMVVGTAHAHYRRHMNAQAHQQQREPSWNN 446
>Z73908-1|CAA98130.2| 230|Caenorhabditis elegans Hypothetical
protein F53B2.2 protein.
Length = 230
Score = 29.1 bits (62), Expect = 3.3
Identities = 36/175 (20%), Positives = 69/175 (39%), Gaps = 5/175 (2%)
Frame = +3
Query: 63 ELIKGVLYVVNVIYAVFGLVTAATGIWFFVQLAEFVSLRNSNHYLLDYRVYWPQVAPWLF 242
+L + +++N+ V G++ IW + E R S Y+ YR +
Sbjct: 8 KLANFLFFILNLGLIVVGVMITWYSIWMILHQFEVTVARTSLFYV--YRT--------IS 57
Query: 243 ILLGLFVMMVAFCGWCGANKESRXXXXXXXXXXXXXXXXQAIAATLIFVFVDGEDTDR-- 416
I++G ++++ CG S+ + +A I +F+ +D R
Sbjct: 58 IMIGGCMVVLGLCGCFAVCFGSKTALSVHLVLVFLVFVVKIVA---IVMFLANKDHLRRE 114
Query: 417 FI---KDTVYDGYYNSQSNPDVFKAFGRIERKLRCCGANDARDYRSWRNDLPLTC 572
F+ +D + Y+N+ + + L+CCGAN D+ N P +C
Sbjct: 115 FVGVYRDELVANYHNNSRTKNTLDW---VHTSLKCCGANGCEDFLPAGN-FPTSC 165
>AF038609-6|AAK29795.1| 245|Caenorhabditis elegans Hypothetical
protein C54E4.1 protein.
Length = 245
Score = 29.1 bits (62), Expect = 3.3
Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Frame = -3
Query: 433 TVSLMKRSVSSPSTNTKINVAAIACPTMMRIRKIP*M-PRSPRLSLLA---PHHPQNAT 269
T L S S + + N AAIA + R+ P P+ PRLS L PHH N+T
Sbjct: 151 TELLTPNSARSDIYSIEFNQAAIAAARLKRLSLTPYPDPQLPRLSPLQQQQPHHRSNST 209
>Z78415-6|CAH60758.1| 291|Caenorhabditis elegans Hypothetical
protein C17G1.8 protein.
Length = 291
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 5/40 (12%)
Frame = +3
Query: 492 IERKLRCCGANDARDYR---SWRNDL--PLTCCLDSYYRA 596
++R+L+CCG ++ D+ W N+L P +CC ++ A
Sbjct: 140 LQRELQCCGVDNYTDWHYSVHWPNNLYTPDSCCDPQHFDA 179
>Z82282-4|CAB05276.1| 485|Caenorhabditis elegans Hypothetical
protein T07G12.4 protein.
Length = 485
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = +2
Query: 98 DLRCFRSSHRRDRDMVLCAISRVRQSQKQQPLLAGLPRLLA 220
DL + SS R DR+ L + Q Q PL G PRL A
Sbjct: 178 DLEPYGSSARTDRNDSLFVLENTPWIQIQYPLQFGFPRLSA 218
>AY373340-1|AAQ76550.1| 1007|Caenorhabditis elegans BAM-2 protein.
Length = 1007
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 216 WPQVAPWLFILLGLFVMMVAFCGWC 290
W + +L ILL LF++M C WC
Sbjct: 866 WILYSLFLTILLCLFILMCIVCYWC 890
>AC024853-1|AAO21419.1| 1007|Caenorhabditis elegans Branching
abnormal protein 2 protein.
Length = 1007
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 216 WPQVAPWLFILLGLFVMMVAFCGWC 290
W + +L ILL LF++M C WC
Sbjct: 866 WILYSLFLTILLCLFILMCIVCYWC 890
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,877,521
Number of Sequences: 27780
Number of extensions: 282692
Number of successful extensions: 1117
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1064
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1112
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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