Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4k18
         (708 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    66   4e-13
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    25   0.70 
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    24   1.6  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    23   2.8  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   5.0  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   5.0  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   5.0  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    21   8.7  

>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 65.7 bits (153), Expect = 4e-13
 Identities = 52/217 (23%), Positives = 97/217 (44%), Gaps = 3/217 (1%)
 Frame = +3

Query: 66  LIKGVLYVVNVIYAVFGLVTAATGIWFFVQLAEFVSLRNSNHYLLDYRVYWPQVAPWLFI 245
           +IK +L++ N ++AV GL     G+   +Q+   VS +      ++  + +P +     I
Sbjct: 7   MIKYLLFIFNFVFAVCGLGILTLGVLIHLQILG-VSKQ------IETGLAFPSIT---LI 56

Query: 246 LLGLFVMMVAFCGWCGANKESRXXXXXXXXXXXXXXXXQAIAATLIFVFVDGEDTDRFIK 425
           +LG  + +++F G CGA +ES                 Q   A   F+ V  +D  R I 
Sbjct: 57  VLGSIIFVISFFGCCGAIRESHCMTITFASFLLFILLVQIAVAVYAFIVVKNDDNFRNIS 116

Query: 426 DT---VYDGYYNSQSNPDVFKAFGRIERKLRCCGANDARDYRSWRNDLPLTCCLDSYYRA 596
           +    +++GY+ +  + D F  F  I++ L+CCG +   DY      +P +CC +S    
Sbjct: 117 EKYQEIFNGYFLNSESKD-FIDF--IQKNLQCCGVHSLSDYND--KPIPASCC-NSPENN 170

Query: 597 SCDFTDKEANERLGCAKVASVYTKIISSSVAGASLLI 707
           +C  ++   N   GC +      K+  +     ++ I
Sbjct: 171 TCSISNSYTN---GCVEALKDTVKLAGTVFGSVAIAI 204


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 25.0 bits (52), Expect = 0.70
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +3

Query: 477 KAFGRIERKLRCCGANDARDYRSWRNDLP 563
           K+F      +RC  A+  R +  WR+ LP
Sbjct: 12  KSFRESRCSVRCSAASGLRWFEIWRDSLP 40


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = +3

Query: 126 AATGIWFFVQLAEFVSLRNSNHYLLDYRVYWPQVAPWLFILLG 254
           +A  I FF+  A F + R    Y  +   Y+P +  WL+IL G
Sbjct: 273 SAVVILFFICWAPFHTQRLLYVYAQESD-YYPDLNEWLYILSG 314


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 8/22 (36%), Positives = 10/22 (45%)
 Frame = +2

Query: 86  RCQCDLRCFRSSHRRDRDMVLC 151
           RC CD+ C     +R   M  C
Sbjct: 477 RCNCDIDCINRVVQRGTKMQFC 498


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +3

Query: 408 TDRFIKDTVYDGYYNSQSNPDVFKAF 485
           +DR +    + GY NS  NP ++  F
Sbjct: 359 SDRMVYFITWLGYVNSALNPLIYTIF 384


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +3

Query: 408 TDRFIKDTVYDGYYNSQSNPDVFKAF 485
           +DR +    + GY NS  NP ++  F
Sbjct: 359 SDRMVYFITWLGYVNSALNPLIYTIF 384


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +3

Query: 408 TDRFIKDTVYDGYYNSQSNPDVFKAF 485
           +DR +    + GY NS  NP ++  F
Sbjct: 359 SDRMVYFITWLGYVNSALNPLIYTIF 384


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -3

Query: 346 RIRKIP*MPRSPR 308
           RIRK+P MP  PR
Sbjct: 644 RIRKMPSMPLLPR 656


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,272
Number of Sequences: 438
Number of extensions: 3657
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21804885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)