Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4k16
         (738 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0221 - 1720952-1721164,1721351-1721428,1721836-1721895,172...    79   5e-15
12_01_0222 - 1675077-1675289,1675476-1675553,1675943-1676002,167...    78   8e-15
01_01_0323 + 2598850-2598924,2599756-2600844,2601352-2602589,260...    29   3.9  
12_02_0928 + 24488891-24489675,24490369-24490421,24490479-244912...    28   6.7  
12_01_0696 + 5936869-5937068,5937705-5938179,5938240-5938665           28   8.9  

>11_01_0221 -
           1720952-1721164,1721351-1721428,1721836-1721895,
           1721996-1722099,1722214-1722372,1722668-1722794,
           1723469-1723636,1723789-1723899,1723989-1724142,
           1724308-1724643,1724753-1724937,1725040-1725138,
           1725275-1725538,1725674-1725850,1726249-1726542,
           1726649-1726816,1727473-1727817,1727901-1728070,
           1728171-1728321,1729193-1729262,1729353-1729537,
           1729896-1729989,1730094-1730212,1730558-1730617,
           1730744-1730830,1732348-1732434,1732622-1732730,
           1732822-1732900,1733067-1733154,1733328-1733392,
           1734287-1734439,1735231-1735337,1735419-1735501,
           1735643-1735733,1735812-1735948,1736118-1736207,
           1736301-1736468,1736875-1737057
          Length = 1805

 Score = 78.6 bits (185), Expect = 5e-15
 Identities = 45/119 (37%), Positives = 63/119 (52%)
 Frame = +2

Query: 185 DEQLESCLNRFLPPVILKLSSSHEQVRTKVMELLVHVNKRVKCRAEVKLPVQTLLQLYMD 364
           D +L   L R LP  I  L+S+   VR  VME+L H+NKRVK R E+ LP+  L ++Y +
Sbjct: 33  DARLAPLLARVLPYAITSLASATASVRKLVMEILSHINKRVKHRPEISLPMLDLWRIYTE 92

Query: 365 RXXXXXXXXXXXXYITMGFPRLPHEQQIILAPSLIEAMDNKPQGHQDGLLMLVMPLLGE 541
                        YI M F RL  E +  +AP L+  + N  + HQ  +L LV+  +GE
Sbjct: 93  STSSTIVRNFCIVYIEMAFERLLSEDKGSIAPDLLINISNVTEQHQGIILRLVVKAIGE 151


>12_01_0222 -
           1675077-1675289,1675476-1675553,1675943-1676002,
           1676103-1676206,1676321-1676479,1676768-1676894,
           1677569-1677736,1677890-1678000,1678090-1678243,
           1678409-1678744,1678854-1679038,1679141-1679239,
           1679376-1679639,1679776-1679952,1680351-1680644,
           1680753-1680920,1681574-1681918,1682002-1682171,
           1682272-1682422,1683296-1683365,1683456-1683640,
           1683999-1684092,1684195-1684313,1684658-1684717,
           1684844-1684930,1685631-1685717,1685905-1686013,
           1686105-1686183,1686350-1686437,1686611-1686675,
           1687570-1687722,1688514-1688620,1688702-1688784,
           1688926-1689016,1689095-1689231,1689612-1689701,
           1689795-1689962,1690366-1690560
          Length = 1809

 Score = 77.8 bits (183), Expect = 8e-15
 Identities = 45/119 (37%), Positives = 62/119 (52%)
 Frame = +2

Query: 185 DEQLESCLNRFLPPVILKLSSSHEQVRTKVMELLVHVNKRVKCRAEVKLPVQTLLQLYMD 364
           D +L   L R LP  I  L+S    VR  VME+L H+NKRVK R E+ LP+  L ++Y +
Sbjct: 37  DARLAPLLARVLPYAITSLASPAASVRKLVMEILSHINKRVKHRPEISLPMLDLWRIYTE 96

Query: 365 RXXXXXXXXXXXXYITMGFPRLPHEQQIILAPSLIEAMDNKPQGHQDGLLMLVMPLLGE 541
                        YI M F RL  E +  +AP L+  + N  + HQ  +L LV+  +GE
Sbjct: 97  STSSTIVRNFCIVYIEMAFERLLSEDKGSIAPDLLINISNVTEQHQGIILRLVVKAIGE 155


>01_01_0323 + 2598850-2598924,2599756-2600844,2601352-2602589,
            2602637-2602810,2603032-2603098,2603735-2603757,
            2603899-2604001,2604087-2604848,2605098-2605292,
            2605496-2606115,2606429-2606480,2606558-2607197,
            2608366-2608574,2608660-2609189,2609500-2609566,
            2609651-2609728,2610415-2610483,2610569-2610643
          Length = 2021

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = +3

Query: 162  CDLVMLILMSSSKVALIDSCRLLY*SYHLHMNRSA 266
            C L+  +L SSS   L DS  +   S HL++N SA
Sbjct: 1813 CALLWELLRSSSSAPLYDSSNIWEGSSHLYLNNSA 1847


>12_02_0928 +
           24488891-24489675,24490369-24490421,24490479-24491229,
           24491322-24491533,24491780-24492570,24492686-24492784
          Length = 896

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +2

Query: 536 GEIKETDLNLKEKPKLATLIVKFATDILLLP 628
           GE+KE+D      PK   LI+ FA+ +  LP
Sbjct: 601 GEMKESDWFQMSFPKAEVLILNFASSVYYLP 631


>12_01_0696 + 5936869-5937068,5937705-5938179,5938240-5938665
          Length = 366

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -2

Query: 182 YQHYQVAKRLYPVTTSHLSNHFHSQIHPSRTFY 84
           + HY+ + R Y     HL   F SQ HPSR  +
Sbjct: 319 WPHYRWSSRRYIDIGPHLCRPFGSQRHPSRRLH 351


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,940,814
Number of Sequences: 37544
Number of extensions: 347102
Number of successful extensions: 748
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 729
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 748
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1945321620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)