Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte4k15
(244 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y00361-1|CAA68439.1| 89|Homo sapiens ubiquitin precursor protein. 90 1e-18
X56999-1|CAA40314.1| 128|Homo sapiens ubiquitin-52 amino acid ... 90 1e-18
X56998-1|CAA40313.1| 128|Homo sapiens ubiquitin-52 amino acid ... 90 1e-18
X56997-1|CAA40312.1| 128|Homo sapiens ubiquitin-52 amino acid f... 90 1e-18
DQ479851-1|ABE96835.1| 128|Homo sapiens ubiquitin A-52 residue ... 90 1e-18
BC101832-1|AAI01833.1| 128|Homo sapiens ubiquitin A-52 residue ... 90 1e-18
BC101830-1|AAI01831.1| 128|Homo sapiens ubiquitin A-52 residue ... 90 1e-18
AF348700-1|AAK31162.1| 141|Homo sapiens ubiquitin A-52 residue ... 90 1e-18
AC005253-2|AAC25582.1| 128|Homo sapiens ubiquitin-52 amino acid... 90 1e-18
AJ406937-1|CAC27576.1| 186|Homo sapiens keratin associated prot... 27 8.4
>Y00361-1|CAA68439.1| 89|Homo sapiens ubiquitin precursor protein.
Length = 89
Score = 90.2 bits (214), Expect = 1e-18
Identities = 37/42 (88%), Positives = 38/42 (90%)
Frame = +3
Query: 6 LRILAMKYNCEKMICRKCYARLHPRATNCRKTKCGHTNNLRP 131
LR LA KYNC+KMICRKCYARLHPRA NCRK KCGHTNNLRP
Sbjct: 43 LRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRP 84
>X56999-1|CAA40314.1| 128|Homo sapiens ubiquitin-52 amino acid
fusion protein protein.
Length = 128
Score = 90.2 bits (214), Expect = 1e-18
Identities = 37/42 (88%), Positives = 38/42 (90%)
Frame = +3
Query: 6 LRILAMKYNCEKMICRKCYARLHPRATNCRKTKCGHTNNLRP 131
LR LA KYNC+KMICRKCYARLHPRA NCRK KCGHTNNLRP
Sbjct: 82 LRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRP 123
>X56998-1|CAA40313.1| 128|Homo sapiens ubiquitin-52 amino acid
fusion protein protein.
Length = 128
Score = 90.2 bits (214), Expect = 1e-18
Identities = 37/42 (88%), Positives = 38/42 (90%)
Frame = +3
Query: 6 LRILAMKYNCEKMICRKCYARLHPRATNCRKTKCGHTNNLRP 131
LR LA KYNC+KMICRKCYARLHPRA NCRK KCGHTNNLRP
Sbjct: 82 LRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRP 123
>X56997-1|CAA40312.1| 128|Homo sapiens ubiquitin-52 amino acid
fusion protein protein.
Length = 128
Score = 90.2 bits (214), Expect = 1e-18
Identities = 37/42 (88%), Positives = 38/42 (90%)
Frame = +3
Query: 6 LRILAMKYNCEKMICRKCYARLHPRATNCRKTKCGHTNNLRP 131
LR LA KYNC+KMICRKCYARLHPRA NCRK KCGHTNNLRP
Sbjct: 82 LRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRP 123
>DQ479851-1|ABE96835.1| 128|Homo sapiens ubiquitin A-52 residue
ribosomal protein fusion product 1 protein.
Length = 128
Score = 90.2 bits (214), Expect = 1e-18
Identities = 37/42 (88%), Positives = 38/42 (90%)
Frame = +3
Query: 6 LRILAMKYNCEKMICRKCYARLHPRATNCRKTKCGHTNNLRP 131
LR LA KYNC+KMICRKCYARLHPRA NCRK KCGHTNNLRP
Sbjct: 82 LRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRP 123
>BC101832-1|AAI01833.1| 128|Homo sapiens ubiquitin A-52 residue
ribosomal protein fusion product 1 protein.
Length = 128
Score = 90.2 bits (214), Expect = 1e-18
Identities = 37/42 (88%), Positives = 38/42 (90%)
Frame = +3
Query: 6 LRILAMKYNCEKMICRKCYARLHPRATNCRKTKCGHTNNLRP 131
LR LA KYNC+KMICRKCYARLHPRA NCRK KCGHTNNLRP
Sbjct: 82 LRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRP 123
>BC101830-1|AAI01831.1| 128|Homo sapiens ubiquitin A-52 residue
ribosomal protein fusion product 1 protein.
Length = 128
Score = 90.2 bits (214), Expect = 1e-18
Identities = 37/42 (88%), Positives = 38/42 (90%)
Frame = +3
Query: 6 LRILAMKYNCEKMICRKCYARLHPRATNCRKTKCGHTNNLRP 131
LR LA KYNC+KMICRKCYARLHPRA NCRK KCGHTNNLRP
Sbjct: 82 LRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRP 123
>AF348700-1|AAK31162.1| 141|Homo sapiens ubiquitin A-52 residue
ribosomal protein fusion product 1 protein.
Length = 141
Score = 90.2 bits (214), Expect = 1e-18
Identities = 37/42 (88%), Positives = 38/42 (90%)
Frame = +3
Query: 6 LRILAMKYNCEKMICRKCYARLHPRATNCRKTKCGHTNNLRP 131
LR LA KYNC+KMICRKCYARLHPRA NCRK KCGHTNNLRP
Sbjct: 95 LRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRP 136
>AC005253-2|AAC25582.1| 128|Homo sapiens ubiquitin-52 amino acid
fusion protein protein.
Length = 128
Score = 90.2 bits (214), Expect = 1e-18
Identities = 37/42 (88%), Positives = 38/42 (90%)
Frame = +3
Query: 6 LRILAMKYNCEKMICRKCYARLHPRATNCRKTKCGHTNNLRP 131
LR LA KYNC+KMICRKCYARLHPRA NCRK KCGHTNNLRP
Sbjct: 82 LRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRP 123
>AJ406937-1|CAC27576.1| 186|Homo sapiens keratin associated protein
4.5 protein.
Length = 186
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +3
Query: 27 YNCEKMICRKCYARLHPRATNCRKTKCGHT 116
Y CE CR C R T C +T C T
Sbjct: 69 YCCESSCCRPCCCRPSCCQTTCCRTTCCRT 98
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,472,663
Number of Sequences: 237096
Number of extensions: 514205
Number of successful extensions: 1637
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1637
length of database: 76,859,062
effective HSP length: 58
effective length of database: 63,107,494
effective search space used: 1388364868
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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