Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte4k15
(244 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 76 4e-15
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 76 4e-15
Z80215-7|CAB02274.1| 674|Caenorhabditis elegans Hypothetical pr... 29 0.33
AL117195-25|CAB55036.1| 1048|Caenorhabditis elegans Hypothetical... 26 3.1
Z82077-2|CAB04940.1| 722|Caenorhabditis elegans Hypothetical pr... 25 5.4
U41015-1|AAA82317.2| 1396|Caenorhabditis elegans Multidrug resis... 25 5.4
U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical p... 25 7.1
AL117202-18|CAB57896.3| 765|Caenorhabditis elegans Hypothetical... 25 7.1
AF040642-9|AAB94950.1| 589|Caenorhabditis elegans Hypothetical ... 25 7.1
Z48638-9|CAA88569.1| 202|Caenorhabditis elegans Hypothetical pr... 25 9.4
Z47812-1|CAA87795.2| 1326|Caenorhabditis elegans Hypothetical pr... 25 9.4
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 75.8 bits (178), Expect = 4e-15
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = +3
Query: 6 LRILAMKYNCEKMICRKCYARLHPRATNCRKTKCGHTNNLR 128
LR LA KYNC+K ICRKCYARL PRA+NCRK KCGH++ LR
Sbjct: 82 LRQLAQKYNCDKQICRKCYARLPPRASNCRKKKCGHSSELR 122
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 75.8 bits (178), Expect = 4e-15
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = +3
Query: 6 LRILAMKYNCEKMICRKCYARLHPRATNCRKTKCGHTNNLR 128
LR LA KYNC+K ICRKCYARL PRA+NCRK KCGH++ LR
Sbjct: 82 LRQLAQKYNCDKQICRKCYARLPPRASNCRKKKCGHSSELR 122
>Z80215-7|CAB02274.1| 674|Caenorhabditis elegans Hypothetical
protein C36B1.9 protein.
Length = 674
Score = 29.5 bits (63), Expect = 0.33
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +3
Query: 48 CRKCYARLHPRATNCRKTKCGHT 116
CR CY H + R +CGHT
Sbjct: 63 CRVCYDEYHSSSNQARVLQCGHT 85
>AL117195-25|CAB55036.1| 1048|Caenorhabditis elegans Hypothetical
protein Y57A10A.31 protein.
Length = 1048
Score = 26.2 bits (55), Expect = 3.1
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +3
Query: 33 CEKMICRKCYARLHPRAT 86
C++ CRKC A HP T
Sbjct: 928 CDRSYCRKCLAEPHPDDT 945
>Z82077-2|CAB04940.1| 722|Caenorhabditis elegans Hypothetical
protein W09C5.5 protein.
Length = 722
Score = 25.4 bits (53), Expect = 5.4
Identities = 7/21 (33%), Positives = 10/21 (47%)
Frame = +3
Query: 48 CRKCYARLHPRATNCRKTKCG 110
C+ C H R +N + CG
Sbjct: 129 CKNCNGNFHKRCSNAARNNCG 149
>U41015-1|AAA82317.2| 1396|Caenorhabditis elegans Multidrug
resistance protein familyprotein 6 protein.
Length = 1396
Score = 25.4 bits (53), Expect = 5.4
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 179 TINFPFGYYLILDLLFGSQIVSVS 108
++ PF +L L LLFG ++ S S
Sbjct: 369 SVRLPFALFLPLGLLFGRELFSTS 392
>U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical
protein F48E3.8a protein.
Length = 2427
Score = 25.0 bits (52), Expect = 7.1
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = -3
Query: 188 SIVTINFPFGYYLILDLLFGSQIVSVSALCL---ATVGSTRMKTGIAFTANH 42
S TIN P GY L+ + S+ +SV L A T + TG + AN+
Sbjct: 1410 SASTINCPIGYDLVNGMCVNSETLSVIQLAAPGGACEDGTILCTGNSVCANN 1461
>AL117202-18|CAB57896.3| 765|Caenorhabditis elegans Hypothetical
protein Y47D3A.22 protein.
Length = 765
Score = 25.0 bits (52), Expect = 7.1
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +3
Query: 15 LAMKYNCEKMICRKCYARLHPRATNCRKT 101
+A+ +NC C C +L + CRKT
Sbjct: 728 IAVVFNCGHTACVDCADKLKKQCHICRKT 756
>AF040642-9|AAB94950.1| 589|Caenorhabditis elegans Hypothetical
protein C50D2.2 protein.
Length = 589
Score = 25.0 bits (52), Expect = 7.1
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -3
Query: 161 GYYLILDLLFGSQIVSVSALCLATVGSTRMKTGIAFT 51
G +IL L +SALC A G+ K G A+T
Sbjct: 60 GPSIILSFLLAGFASLLSALCYAEFGARFPKAGSAYT 96
>Z48638-9|CAA88569.1| 202|Caenorhabditis elegans Hypothetical
protein ZK892.7 protein.
Length = 202
Score = 24.6 bits (51), Expect = 9.4
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +3
Query: 72 HPRATNCRKTKCGHT 116
+P+ + CRK KCG T
Sbjct: 172 NPKISGCRKRKCGMT 186
>Z47812-1|CAA87795.2| 1326|Caenorhabditis elegans Hypothetical
protein T05H10.1 protein.
Length = 1326
Score = 24.6 bits (51), Expect = 9.4
Identities = 13/46 (28%), Positives = 20/46 (43%)
Frame = -3
Query: 164 FGYYLILDLLFGSQIVSVSALCLATVGSTRMKTGIAFTANHFLTVI 27
+G + ILD+ S V T+ R+ G TAN + V+
Sbjct: 632 YGVHFILDVRIASSFFPVDIKNKITIKVQRVDIGKKTTANELIVVV 677
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,829,809
Number of Sequences: 27780
Number of extensions: 83765
Number of successful extensions: 227
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 225
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 227
length of database: 12,740,198
effective HSP length: 60
effective length of database: 11,073,398
effective search space used: 221467960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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