Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4k14
         (560 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66560-1|CAA91449.1|  214|Caenorhabditis elegans Hypothetical pr...    47   8e-06
AF025462-3|AAB71002.1|  309|Caenorhabditis elegans Hypothetical ...    44   1e-04
AC006804-5|AAF60754.1|  213|Caenorhabditis elegans Hypothetical ...    41   7e-04
AC024200-13|AAF36004.1|  214|Caenorhabditis elegans Glutathione ...    40   0.002
Z70718-6|CAA94677.1| 1029|Caenorhabditis elegans Hypothetical pr...    30   0.99 
Z54218-4|CAA90958.1| 1367|Caenorhabditis elegans Hypothetical pr...    28   4.0  
Z49910-9|CAA90125.1| 1367|Caenorhabditis elegans Hypothetical pr...    28   4.0  
Z81133-6|CAJ85766.1|  398|Caenorhabditis elegans Hypothetical pr...    28   5.3  
Z81133-5|CAB03442.2| 1838|Caenorhabditis elegans Hypothetical pr...    28   5.3  
Z80217-8|CAB02294.1|  207|Caenorhabditis elegans Hypothetical pr...    27   7.0  
Z80217-3|CAB02289.1|  210|Caenorhabditis elegans Hypothetical pr...    27   7.0  

>Z66560-1|CAA91449.1|  214|Caenorhabditis elegans Hypothetical
           protein D1053.1 protein.
          Length = 214

 Score = 47.2 bits (107), Expect = 8e-06
 Identities = 27/71 (38%), Positives = 40/71 (56%)
 Frame = +2

Query: 230 LYCNYYSFYSQKVLMALYEKNIDFEPLIVDITKGEQYSSWFLEINPRGEIPVLKVKDALI 409
           LY  + S  S +V +AL  KN+D+E   VD+   E+  S   EINP  ++P   V   +I
Sbjct: 8   LYSYWRSSCSWRVRIALALKNVDYEYKTVDLLS-EEAKSKLKEINPAAKVPTFVVDGQVI 66

Query: 410 PDSTRILDYLE 442
            +S  I++YLE
Sbjct: 67  TESLAIIEYLE 77


>AF025462-3|AAB71002.1|  309|Caenorhabditis elegans Hypothetical
           protein K10F12.4a protein.
          Length = 309

 Score = 43.6 bits (98), Expect = 1e-04
 Identities = 22/71 (30%), Positives = 44/71 (61%)
 Frame = +2

Query: 230 LYCNYYSFYSQKVLMALYEKNIDFEPLIVDITKGEQYSSWFLEINPRGEIPVLKVKDALI 409
           LY   +  Y+Q+VL+ L +KNI  E  +V++   ++  +W+L  +P G +P L++   ++
Sbjct: 101 LYSMRFCPYAQRVLIYLAKKNIPVE--VVNVNP-DRSPNWYLPKSPIGRVPALEINGKVV 157

Query: 410 PDSTRILDYLE 442
            +S  I++YL+
Sbjct: 158 WESNVIVEYLD 168


>AC006804-5|AAF60754.1|  213|Caenorhabditis elegans Hypothetical
           protein Y53G8B.1 protein.
          Length = 213

 Score = 40.7 bits (91), Expect = 7e-04
 Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
 Frame = +2

Query: 230 LYCNYYSFYSQKVLMALYEKNIDFEPLIVDITKGEQYSSWFLEINPRGEIPVLKVKDALI 409
           LY ++ S  S +V  AL  K ID+E   V++   +Q    F   NP  ++P+LK+    +
Sbjct: 7   LYSSWSSGCSSRVRTALALKKIDYEYQPVNLLN-KQKEQEFHGNNPAEKVPILKINGLTL 65

Query: 410 PDSTRILDYL-EFYLDSGII 466
            +S  I++YL E Y D  ++
Sbjct: 66  TESMAIIEYLDEIYPDPPLL 85


>AC024200-13|AAF36004.1|  214|Caenorhabditis elegans Glutathione
           s-transferase protein43 protein.
          Length = 214

 Score = 39.5 bits (88), Expect = 0.002
 Identities = 22/72 (30%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
 Frame = +2

Query: 230 LYCNYYSFYSQKVLMALYEKNIDFEPLIVDITKGE-QYSSWFLEINPRGEIPVLKVKDAL 406
           LY  + S  + +V +AL  KNID+E   +D+   E + ++ F++ NP  ++P L +    
Sbjct: 6   LYSYWRSSCAWRVRIALALKNIDYEYRPIDLFSEESKNNAEFVKHNPAKKVPTLVINGLS 65

Query: 407 IPDSTRILDYLE 442
           + +S  I++YL+
Sbjct: 66  LTESLAIIEYLD 77


>Z70718-6|CAA94677.1| 1029|Caenorhabditis elegans Hypothetical
           protein C04G2.6 protein.
          Length = 1029

 Score = 30.3 bits (65), Expect = 0.99
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -3

Query: 366 GFISRNQEEYCSPFVMSTIKGSKSIFF 286
           G I RN  EYC   + ST+KG++   F
Sbjct: 356 GIIKRNWREYCGMLLPSTVKGARRHLF 382


>Z54218-4|CAA90958.1| 1367|Caenorhabditis elegans Hypothetical
           protein F44G4.8 protein.
          Length = 1367

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 22/70 (31%), Positives = 35/70 (50%)
 Frame = +2

Query: 284 EKNIDFEPLIVDITKGEQYSSWFLEINPRGEIPVLKVKDALIPDSTRILDYLEFYLDSGI 463
           E NI    +  D    + +S  + +INP  + PVL++ D  IP+       LEFYL +  
Sbjct: 148 EHNITMRTIKNDSYLQDSFSIEYRQINPDKKFPVLQILD--IPEQKN----LEFYLGNLN 201

Query: 464 IKF*HLLRLI 493
             F + +R+I
Sbjct: 202 SGFDYSVRVI 211


>Z49910-9|CAA90125.1| 1367|Caenorhabditis elegans Hypothetical
           protein F44G4.8 protein.
          Length = 1367

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 22/70 (31%), Positives = 35/70 (50%)
 Frame = +2

Query: 284 EKNIDFEPLIVDITKGEQYSSWFLEINPRGEIPVLKVKDALIPDSTRILDYLEFYLDSGI 463
           E NI    +  D    + +S  + +INP  + PVL++ D  IP+       LEFYL +  
Sbjct: 148 EHNITMRTIKNDSYLQDSFSIEYRQINPDKKFPVLQILD--IPEQKN----LEFYLGNLN 201

Query: 464 IKF*HLLRLI 493
             F + +R+I
Sbjct: 202 SGFDYSVRVI 211


>Z81133-6|CAJ85766.1|  398|Caenorhabditis elegans Hypothetical
           protein T28B8.3b protein.
          Length = 398

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = +2

Query: 101 YENSF*LSQ*FSLKMHYVQKYLEKLPISKSNMKTNEGKKCSI-FLYCNYYSFYSQKV 268
           Y N F +SQ    +   ++K L +    +      E  KC + F++C+Y  F  QK+
Sbjct: 244 YSNIFPMSQ--QSRRDDIEKLLFRAVYDREISVRKEAAKCLLLFIHCSYIQFSDQKI 298


>Z81133-5|CAB03442.2| 1838|Caenorhabditis elegans Hypothetical protein
            T28B8.3a protein.
          Length = 1838

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = +2

Query: 101  YENSF*LSQ*FSLKMHYVQKYLEKLPISKSNMKTNEGKKCSI-FLYCNYYSFYSQKV 268
            Y N F +SQ    +   ++K L +    +      E  KC + F++C+Y  F  QK+
Sbjct: 1684 YSNIFPMSQ--QSRRDDIEKLLFRAVYDREISVRKEAAKCLLLFIHCSYIQFSDQKI 1738


>Z80217-8|CAB02294.1|  207|Caenorhabditis elegans Hypothetical
           protein F37B1.8 protein.
          Length = 207

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +2

Query: 362 NPRGEIPVLKVKDALIPDSTRILDYL 439
           +P G++P+L V    IP S  IL YL
Sbjct: 46  SPMGQLPILGVDGLEIPQSAAILRYL 71


>Z80217-3|CAB02289.1|  210|Caenorhabditis elegans Hypothetical
           protein F37B1.3 protein.
          Length = 210

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = +2

Query: 365 PRGEIPVLKVKDALIPDSTRILDYL 439
           P G++PVL V D  IP S  I  YL
Sbjct: 49  PMGQLPVLTVDDFEIPQSAAINRYL 73


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,392,844
Number of Sequences: 27780
Number of extensions: 189461
Number of successful extensions: 431
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 424
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 428
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1155524042
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)