Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte4k13
(726 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC215.09c |erg10||acetyl-CoA C-acetyltransferase Erg10 |Schizo... 130 2e-31
SPAC9G1.05 |||actin cortical patch component Aip1 |Schizosacchar... 28 1.2
SPBPB2B2.01 |||amino acid permease, unknown 12|Schizosaccharomyc... 28 1.6
SPAC32A11.01 |mug8||conserved fungal protein|Schizosaccharomyces... 26 4.8
SPAC6G9.10c |sen1||ATP-dependent 5' to 3' DNA/RNA helicase Sen1|... 26 4.8
SPAC17G6.13 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 4.8
SPAC110.01 |ppk1|SPAC140.05|serine/threonine protein kinase Ppk1... 26 6.3
SPCC1840.11 |csl4|SPCC965.01|exosome subunit Csl4|Schizosaccharo... 25 8.3
SPBC12C2.02c |ste20|ste16|sterility protein Ste20|Schizosaccharo... 25 8.3
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 25 8.3
>SPBC215.09c |erg10||acetyl-CoA C-acetyltransferase Erg10
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 395
Score = 130 bits (314), Expect = 2e-31
Identities = 79/214 (36%), Positives = 116/214 (54%), Gaps = 2/214 (0%)
Frame = +2
Query: 71 VNKGIFIVAAKRTPFGKMGGLLKDIHPSDLLAVAAKESFKAGNVAPALVDTVNIGQVYSL 250
VN ++IV+A RTP G GG + + L ++A K + + N+ P+ VD V +G V S
Sbjct: 2 VNTEVYIVSAVRTPMGSFGGSFASLPATKLGSIAIKGALERVNIKPSDVDEVFMGNVVS- 60
Query: 251 SGTSDGGLSP-RHAALKSGVPQEKPALGVNRLCGSGFQAVINSAQDILTGTAQISLAGGT 427
++ G +P R AL +G+P+ VN++C SG +A I AQ I+TG A+I +AGGT
Sbjct: 61 ---ANLGQNPARQCALGAGLPRSIVCTTVNKVCASGMKATILGAQTIMTGNAEIVVAGGT 117
Query: 428 ENMSAVPFVVRNTRFGVPLGVNIPFEDSLSAGSL-DTYCNYTMPQTAENLAEKYELKRGE 604
E+MS P+ RFG G N+ D L L D Y M AE AE++ + R
Sbjct: 118 ESMSNAPYYAPKNRFGAKYG-NVELVDGLLRDGLSDAYDGLPMGNAAELCAEEHSIDRAS 176
Query: 605 VDQFSLQSQQRWKTAHDSGVFKAEMAPVTVKVKR 706
D F++ S +R + A + F+ E+ PV V V R
Sbjct: 177 QDAFAISSYKRAQNAQATKAFEQEIVPVEVPVGR 210
>SPAC9G1.05 |||actin cortical patch component Aip1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 595
Score = 28.3 bits (60), Expect = 1.2
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -1
Query: 378 ALLMTAWNPDPHNLLTPSAGFSC 310
++ +W+PD +T SAG+SC
Sbjct: 233 SIFSISWSPDSSQFVTSSAGYSC 255
>SPBPB2B2.01 |||amino acid permease, unknown 12|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 585
Score = 27.9 bits (59), Expect = 1.6
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +2
Query: 353 GFQAVINSAQDILTGTAQISLAGG-TEN-MSAVPFVVRNTRFGVPL 484
GF AV SA +GT + +A TEN A P VR T F + +
Sbjct: 271 GFCAVFTSAAFSFSGTEYVGVAAAETENPAKAFPVAVRQTLFRIAI 316
>SPAC32A11.01 |mug8||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 720
Score = 26.2 bits (55), Expect = 4.8
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +3
Query: 480 LWA*IFPSKIPSQRDLWTHTATTLCLKLLKIWLRNTNSKGE 602
+WA +P + ++ T CL+LL ++R TN E
Sbjct: 191 IWAFDWPMMNLQETFIYWDRCTNACLRLLLCYIRYTNKSSE 231
>SPAC6G9.10c |sen1||ATP-dependent 5' to 3' DNA/RNA helicase
Sen1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1687
Score = 26.2 bits (55), Expect = 4.8
Identities = 22/86 (25%), Positives = 36/86 (41%)
Frame = +2
Query: 449 FVVRNTRFGVPLGVNIPFEDSLSAGSLDTYCNYTMPQTAENLAEKYELKRGEVDQFSLQS 628
F++ N +P V I ++++ D Y QT + L E + +G +D SLQ
Sbjct: 1215 FLLENGEKYIPRVVRIGNPETINVSVRDLSLEY---QTEKQLLE---VNQGAIDLGSLQE 1268
Query: 629 QQRWKTAHDSGVFKAEMAPVTVKVKR 706
RW+ + K E + V R
Sbjct: 1269 LTRWRDTFYDCIQKIEELEKQIDVAR 1294
>SPAC17G6.13 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 433
Score = 26.2 bits (55), Expect = 4.8
Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Frame = +2
Query: 152 SDLLAVAAKESFKAGNVAPALVDTVNIGQVYSLSGTSDGGLSPRHAALKSGVPQEKPALG 331
+D L A + S K GN + T S + S G L+P ++ P+++P
Sbjct: 242 NDYLLAAQRRSNKRGNARKHIDLTARESPSTSFAQMSKGALNPDPEVIE---PEDEPTTF 298
Query: 332 VN---RLCGSGFQAVINSAQDI 388
N L +G +V++S +D+
Sbjct: 299 RNPLEALLSTGQYSVVSSDEDV 320
>SPAC110.01 |ppk1|SPAC140.05|serine/threonine protein kinase Ppk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1023
Score = 25.8 bits (54), Expect = 6.3
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 495 FPSKIPSQRDLWTHTATTLCLKLLKIWLRNTNSK 596
FP KIPS+ DL T L + K+ +N ++K
Sbjct: 218 FPKKIPSKEDLETREVLLLPPQTSKLSNKNLDTK 251
>SPCC1840.11 |csl4|SPCC965.01|exosome subunit
Csl4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 181
Score = 25.4 bits (53), Expect = 8.3
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +2
Query: 134 LKDIHPSDLLAVAAKESFKAGNVAPALVDTVNIGQVYSLS 253
++DI ++ V + SF+ G++ ALV ++ G Y L+
Sbjct: 95 VQDIRATEKNKVKVQNSFRPGDIVRALVISLGDGSSYFLT 134
>SPBC12C2.02c |ste20|ste16|sterility protein Ste20|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1309
Score = 25.4 bits (53), Expect = 8.3
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = +2
Query: 212 LVDTVNIGQVYSLSGTSDGGLSPRHAALKSGVPQEKPALGVNRLCGSGFQAVINS 376
++++++ + SL GTS G PRHA P+ R+ F ++++S
Sbjct: 1158 ILESLHWYSLMSLMGTSQGICIPRHAGQVLSTPRRNVEFVNERVPTPEFSSLLSS 1212
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 25.4 bits (53), Expect = 8.3
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 586 RTQKGRS*SVFASIPAEMENSARQRRLQG 672
++ KGRS S S P+ +E+S RQ+ G
Sbjct: 1535 KSNKGRSASYTFSDPSSLEDSNRQKPFNG 1563
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,125,251
Number of Sequences: 5004
Number of extensions: 69126
Number of successful extensions: 164
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 163
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 341222980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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