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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4k13
         (726 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0071 + 548255-548399,548478-548651,548787-548892,548992-54...   126   2e-29
09_02_0075 + 3916373-3916400,3916760-3916858,3916943-3917116,391...   122   2e-28
02_05_1230 - 35099942-35100018,35100138-35100221,35100367-351004...    93   2e-19
10_08_0258 + 16261454-16261540,16261636-16261712,16262734-162628...    87   1e-17
04_01_0097 - 998766-999383,999479-999861,1000021-1000398,1000486...    33   0.17 
11_03_0193 - 11437237-11437533,11438834-11439643                       32   0.53 
08_02_0848 - 21835146-21835217,21835712-21835759,21835846-218359...    31   0.93 
07_03_1375 + 26120094-26120651                                         31   0.93 
03_05_0440 + 24322332-24322388,24323478-24323615,24323654-243237...    30   1.6  
05_02_0105 + 6644264-6644344,6645573-6646097,6646185-6646410,664...    29   2.8  
03_02_0142 + 5877480-5879663,5879783-5879898,5880749-5882419,588...    29   2.8  
03_01_0291 - 2250349-2250966,2251062-2251444,2251604-2251981,225...    29   2.8  
07_01_1004 + 8500584-8501881,8502194-8502402,8503024-8503266,850...    29   3.8  
10_05_0114 + 9294747-9294788,9294883-9294996,9295066-9295173,929...    29   5.0  
03_06_0454 + 34044351-34044499,34045495-34045510,34045640-340458...    29   5.0  
03_05_0704 - 26953474-26953643,26953770-26953801,26953915-269540...    29   5.0  
03_02_0875 + 12038365-12039329,12039417-12039593,12039651-120398...    29   5.0  
11_02_0138 - 8708483-8709033,8709163-8709265,8709312-8709359,871...    28   6.6  
02_01_0502 - 3659564-3659660,3659923-3660061,3660161-3660238,366...    28   6.6  
01_06_0115 + 26585481-26586401,26586501-26586556,26586747-265868...    28   6.6  
07_03_1133 - 24199643-24200422,24200786-24200968,24201241-242013...    28   8.7  

>01_01_0071 +
           548255-548399,548478-548651,548787-548892,548992-549130,
           549216-549293,549395-549460,550061-550201,550417-550527,
           550614-550655,550739-550825,551033-551118,551681-551684
          Length = 392

 Score =  126 bits (304), Expect = 2e-29
 Identities = 75/210 (35%), Positives = 111/210 (52%)
 Frame = +2

Query: 77  KGIFIVAAKRTPFGKMGGLLKDIHPSDLLAVAAKESFKAGNVAPALVDTVNIGQVYSLSG 256
           + + IV   RTP G + G L  +  + L +VA + + +  NV PALV  V +G V S   
Sbjct: 15  RDVCIVGVARTPIGALLGSLSSLPATKLGSVAIQAALRRANVEPALVQEVFMGNVLS--- 71

Query: 257 TSDGGLSPRHAALKSGVPQEKPALGVNRLCGSGFQAVINSAQDILTGTAQISLAGGTENM 436
            + G    R AAL +G+P   P   VN++C SG +AV+ +AQ I  G   + +AGG E+M
Sbjct: 72  ANLGQAPARQAALGAGLPDTVPCTTVNKVCSSGMKAVMLAAQTIQLGMHDVVVAGGMESM 131

Query: 437 SAVPFVVRNTRFGVPLGVNIPFEDSLSAGSLDTYCNYTMPQTAENLAEKYELKRGEVDQF 616
           S  P  V   R G   G ++  +  L  G  D Y ++ M   AE  A+++ + R E D +
Sbjct: 132 SNAPKYVAAARRGSRFGHDVLIDGMLKDGLWDVYNDFPMGMCAELCADQHSISREEQDLY 191

Query: 617 SLQSQQRWKTAHDSGVFKAEMAPVTVKVKR 706
           ++QS +R   A DSG F  E+APV +   R
Sbjct: 192 AIQSNERAIAARDSGTFSWEIAPVEISSGR 221


>09_02_0075 +
           3916373-3916400,3916760-3916858,3916943-3917116,
           3917207-3917312,3917671-3917809,3918457-3918534,
           3918863-3918928,3919213-3919298,3919939-3920038,
           3920245-3920355,3920457-3920498,3920671-3920757,
           3921013-3921102
          Length = 401

 Score =  122 bits (295), Expect = 2e-28
 Identities = 76/219 (34%), Positives = 112/219 (51%), Gaps = 2/219 (0%)
 Frame = +2

Query: 74  NKGIFIVAAKRTPFGKMGGLLKDIHPSDLLAVAAKESFKAGNVAPALVDTVNIGQVYSLS 253
           ++ + +V   RTP G   G L  +  + L ++A + + K  NV PALV  V  G V S  
Sbjct: 8   SRDVCVVGVARTPMGGFLGALSSLSATKLGSIAIEAALKRANVDPALVQEVFFGNVLS-- 65

Query: 254 GTSDGGLSPRHAALKSGVPQEKPALGVNRLCGSGFQAVINSAQDILTGTAQISLAGGTEN 433
             + G    R AAL +G+P       VN++C SG +A + +AQ IL G   I +AGG E+
Sbjct: 66  -ANLGQAPARQAALGAGIPNTVVCSAVNKVCASGMKATMFAAQSILLGINDIVVAGGMES 124

Query: 434 MSAVPFVVRNTRFGVPLGVNIPFEDSLSAGSLDTYCNYTMPQTAENLAEKYELKRGEVDQ 613
           MS  P  +   R G   G +   +  L  G  D Y ++ M   AE  A+ + L R + D 
Sbjct: 125 MSNAPKYIAEARKGSRFGHDTLVDGMLKDGLWDVYGDFAMGNCAELCADNHALTREDQDA 184

Query: 614 FSLQSQQRWKTAHDSGVFKAEMAPVTVKVKRQE--VLVD 724
           +++QS +R   A +SG F  E+ P+ V V R +  VLVD
Sbjct: 185 YAIQSNERGIAARNSGAFAWEIVPIEVPVGRGKPPVLVD 223


>02_05_1230 -
           35099942-35100018,35100138-35100221,35100367-35100475,
           35100564-35100687,35101157-35101253,35101375-35101507,
           35101654-35101731,35101821-35101928,35102011-35102078,
           35102181-35102279,35102379-35102505,35102623-35102707,
           35103297-35103373,35103482-35103562
          Length = 448

 Score = 93.5 bits (222), Expect = 2e-19
 Identities = 72/213 (33%), Positives = 96/213 (45%), Gaps = 2/213 (0%)
 Frame = +2

Query: 68  AVNKGIFIVAAKRTPF--GKMGGLLKDIHPSDLLAVAAKESFKAGNVAPALVDTVNIGQV 241
           A    + +VAA RTP    K GG  KD +P DLL V  K       + P  +  + +G V
Sbjct: 44  AYGDDVVVVAAYRTPICKAKRGGF-KDTYPEDLLTVVLKAVLDNTKINPGEIGDIVVGTV 102

Query: 242 YSLSGTSDGGLSPRHAALKSGVPQEKPALGVNRLCGSGFQAVINSAQDILTGTAQISLAG 421
             L   S   +  R AA  +GVP+  P   VNR C SG QAV + A  I  G   I +  
Sbjct: 103 --LGPGSQRAIECRAAAFYAGVPENVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGA 160

Query: 422 GTENMSAVPFVVRNTRFGVPLGVNIPFEDSLSAGSLDTYCNYTMPQTAENLAEKYELKRG 601
           G E+MS           G    VN    +   A      C   M  T+EN+A +Y + R 
Sbjct: 161 GLESMSV-------NAMGWEGQVNPKVNEVQKAQD----CLLPMGITSENVAHRYGVTRQ 209

Query: 602 EVDQFSLQSQQRWKTAHDSGVFKAEMAPVTVKV 700
           E DQ + +S +R   A  +G FK E+ PV  K+
Sbjct: 210 EQDQAAAESHRRAAAATAAGKFKDEIVPVPTKI 242


>10_08_0258 +
           16261454-16261540,16261636-16261712,16262734-16262818,
           16262931-16263057,16263147-16263245,16263343-16263410,
           16263514-16263621,16263727-16263804,16263921-16264053,
           16264138-16264234,16264465-16264588,16264668-16264776,
           16264899-16264982,16265071-16265180
          Length = 461

 Score = 87.0 bits (206), Expect = 1e-17
 Identities = 69/208 (33%), Positives = 99/208 (47%), Gaps = 2/208 (0%)
 Frame = +2

Query: 83  IFIVAAKRTPF--GKMGGLLKDIHPSDLLAVAAKESFKAGNVAPALVDTVNIGQVYSLSG 256
           + IVAA RT     K GG  KD    DLL    K       + P+ V  + +G V  L+ 
Sbjct: 51  VVIVAAYRTAICKSKRGGF-KDTPAEDLLVPVFKALIDKTKLNPSEVGDIVVGTV--LAP 107

Query: 257 TSDGGLSPRHAALKSGVPQEKPALGVNRLCGSGFQAVINSAQDILTGTAQISLAGGTENM 436
            S   +  R AA  +G P   P + VNR C SG QAV N A +I  G   I +A G E+M
Sbjct: 108 GSQRAIECRMAAFYAGFPDTVPLMTVNRQCSSGLQAVANVASNIKAGLYDIGIAAGLESM 167

Query: 437 SAVPFVVRNTRFGVPLGVNIPFEDSLSAGSLDTYCNYTMPQTAENLAEKYELKRGEVDQF 616
           +     V   R    +   +     L + + D  C   M  T+EN+A+++ + R E DQ 
Sbjct: 168 T-----VNQVRLDGQVNPKV----ELFSQARD--CLLPMGLTSENVAKRFGITRMEQDQA 216

Query: 617 SLQSQQRWKTAHDSGVFKAEMAPVTVKV 700
           +++S ++   A  SG FK E+ PV  K+
Sbjct: 217 AVESHRKAAAAAASGKFKEEIVPVHTKI 244


>04_01_0097 -
           998766-999383,999479-999861,1000021-1000398,
           1000486-1000711,1000799-1001323,1003032-1003164,
           1004353-1004435,1004645-1005349,1005483-1005556,
           1006290-1006392,1006485-1006727
          Length = 1156

 Score = 33.5 bits (73), Expect = 0.17
 Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 7/71 (9%)
 Frame = +3

Query: 438 QQFRLSSGTPVSEYLWA*IFP-SKIPSQRDLWTHT------ATTLCLKLLKIWLRNTNSK 596
           QQ + S+   V   L++ IF   K+ S R  + H       A  + L L+ +WLRN N K
Sbjct: 424 QQAKSSASPVVQPLLFSPIFRVPKMESNRQQYVHCFLLRQKAVVILLVLILVWLRNKNGK 483

Query: 597 GEKLISFRFNP 629
             K    R+ P
Sbjct: 484 RSKCKGVRYGP 494


>11_03_0193 - 11437237-11437533,11438834-11439643
          Length = 368

 Score = 31.9 bits (69), Expect = 0.53
 Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 2/108 (1%)
 Frame = +2

Query: 125 GGLLKDIHPSDLLAVAAKESFKAGNVAPALVDTVNIGQVYSLSGTSDGGLSPRHAALKSG 304
           G  + D HPS +  V A  S      A  L D +      SL      G +P   ++   
Sbjct: 114 GAAIVDGHPSQVPTVLAMGSRHCVEAAMGLADWIKKDSP-SLLFEDVHGATPFDESMADL 172

Query: 305 VPQEKPAL--GVNRLCGSGFQAVINSAQDILTGTAQISLAGGTENMSA 442
            P+    L  G+    GSGF AV+   +++  G   ++  GG +  +A
Sbjct: 173 DPETHGLLNEGLAAHDGSGFAAVLRECREVFQGLESLTDCGGGDGATA 220


>08_02_0848 -
           21835146-21835217,21835712-21835759,21835846-21835943,
           21836028-21836136,21837362-21837594,21837664-21837749,
           21838038-21838095,21839068-21839135,21839258-21839565
          Length = 359

 Score = 31.1 bits (67), Expect = 0.93
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = -3

Query: 643 FPSLLGLKRKLINFSPFEFVFLSQIFSSLRHSV 545
           +PS   +K KLI   P+EFVF+ Q F   R  V
Sbjct: 149 YPSDESVKSKLIYIDPWEFVFIVQTFVEQRRGV 181


>07_03_1375 + 26120094-26120651
          Length = 185

 Score = 31.1 bits (67), Expect = 0.93
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +1

Query: 391 NRYGSDFLSRWHGEHVSSSVCRQEHP 468
           +R+ S+ L RW G H S  VCR+E P
Sbjct: 106 HRFHSECLERWLGVHGSCPVCRRELP 131


>03_05_0440 +
           24322332-24322388,24323478-24323615,24323654-24323736,
           24325038-24325128,24326091-24326189,24326356-24326418,
           24327182-24327259,24329354-24329543,24329812-24330065,
           24330159-24330531,24331193-24331276,24332085-24332371,
           24332495-24332542,24333194-24333220,24333951-24333987,
           24334063-24334250,24334343-24334521,24334595-24334877,
           24335481-24335717,24335798-24335988,24336552-24336561,
           24336844-24336984,24337073-24337288,24338437-24338727,
           24338852-24339025
          Length = 1272

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 22/79 (27%), Positives = 33/79 (41%)
 Frame = +2

Query: 152 SDLLAVAAKESFKAGNVAPALVDTVNIGQVYSLSGTSDGGLSPRHAALKSGVPQEKPALG 331
           SDL  V+A+E   + N A   VDT            S G    +   LK+  P+ +P  G
Sbjct: 620 SDLDNVSAEEGKVSSNKAMDTVDTTQGATTQQADLASKGRSRRKIGILKALAPECRPTDG 679

Query: 332 VNRLCGSGFQAVINSAQDI 388
            + L    F   +N+  D+
Sbjct: 680 ADDLRSDKFSYAVNNVIDL 698


>05_02_0105 +
           6644264-6644344,6645573-6646097,6646185-6646410,
           6646498-6646875,6647035-6647417,6647513-6648130
          Length = 736

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +3

Query: 540 ATTLCLKLLKIWLRNTNSKGEKLISFRFNP 629
           A  + L L+ +WLRN N K  K    R+ P
Sbjct: 45  AVVILLVLILVWLRNKNGKRSKCKGVRYGP 74


>03_02_0142 +
           5877480-5879663,5879783-5879898,5880749-5882419,
           5882570-5882618,5882703-5882941,5883073-5883174,
           5883634-5883862
          Length = 1529

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
 Frame = +1

Query: 424 HGEHVSSSVCRQEHPFRSTSGRE-YSLRRFPLSGISGHILQLHYASNC*KFG*EIRTQKG 600
           HG+HVSS    + HPF   +G+E  +L +     +  ++LQ H   N    G  IR   G
Sbjct: 637 HGQHVSSDFATRRHPF--FAGKESQNLGQSGQQAMGSYMLQNHAMDNS---GMNIRHSSG 691

Query: 601 RS-*SVFASIPAEMENSARQR 660
               + F S   ++ N+ + R
Sbjct: 692 NPVPNQFPSQSHQLHNNLKPR 712


>03_01_0291 -
           2250349-2250966,2251062-2251444,2251604-2251981,
           2252147-2252294,2252382-2252906,2253990-2254112,
           2254151-2254205,2254510-2254640
          Length = 786

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +3

Query: 540 ATTLCLKLLKIWLRNTNSKGEKLISFRFNP 629
           A  + L L+ +WLRN N K  K    R+ P
Sbjct: 121 AVVILLVLILVWLRNKNGKRSKCKGVRYGP 150


>07_01_1004 +
           8500584-8501881,8502194-8502402,8503024-8503266,
           8503381-8503697,8503891-8504250
          Length = 808

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 40/172 (23%), Positives = 70/172 (40%), Gaps = 7/172 (4%)
 Frame = +2

Query: 149 PSDLLAVAAKESFKAGNVAPALVDTVNIGQVYSLSGTSDGGLSPRHAALKSGVPQEKPAL 328
           P  + A+    +  AG + P+L +   + ++  ++    GG+    AAL+     E  A+
Sbjct: 170 PVGIEALVLSSNRLAGTIPPSLGNVTTLRKLACMNNGVGGGIPGELAALRG---MEVLAV 226

Query: 329 GVNRLCGSGFQAVINSAQDILTGTAQISLAGGTEN--MSAVPFVVRNTRFGVPLGVNIP- 499
             NRL G    AV+N +   + G +     G   +     +P + + T  G     NIP 
Sbjct: 227 DGNRLSGGFPVAVMNMSGLAVLGLSTNGFTGELPSGIGGFLPKLRQLTIGGNFFQGNIPS 286

Query: 500 ----FEDSLSAGSLDTYCNYTMPQTAENLAEKYELKRGEVDQFSLQSQQRWK 643
                 +    G  D      +P +   LA K  L   E++Q   +S+Q W+
Sbjct: 287 SLANASNLFKLGMSDNNFTGVVPASIGKLA-KLTLLNLEMNQLHARSKQEWE 337


>10_05_0114 +
           9294747-9294788,9294883-9294996,9295066-9295173,
           9295774-9296145,9296584-9296652,9296754-9296825,
           9297070-9297198,9297690-9297770,9298622-9298807,
           9299135-9299860
          Length = 632

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +1

Query: 196 KCCSCFGRHCQHWTGLFAKRNIRRWFI 276
           KC   F  HC+       KRN +R+FI
Sbjct: 225 KCVDGFDHHCRWLNNCIGKRNYKRFFI 251


>03_06_0454 +
           34044351-34044499,34045495-34045510,34045640-34045862,
           34045969-34046092,34046168-34046294,34046821-34046882,
           34046972-34048023,34048167-34048556,34048667-34052628,
           34052710-34052796,34052885-34053004,34053096-34053152
          Length = 2122

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +2

Query: 278 PRHAALKSGVPQEKPALGVNRLCGSGFQAVINSAQDILT 394
           PR   LK   P+E     ++R+C    Q +I+S Q I +
Sbjct: 249 PRTTKLKYRYPRESDHKNISRICREHLQEIISSQQKIFS 287


>03_05_0704 -
           26953474-26953643,26953770-26953801,26953915-26954009,
           26954107-26954180,26954283-26954412,26954522-26954585,
           26954660-26954722,26954795-26954937,26955386-26955523,
           26955610-26955731,26955805-26955976,26956559-26956630,
           26956753-26956887,26956987-26957103,26957184-26957316,
           26957455-26957561,26958060-26958077,26958235-26958379,
           26958472-26958671,26960744-26961421
          Length = 935

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
 Frame = +2

Query: 302 GVPQEKPALGVNRLCG--SGFQAVINSAQDILTGTAQISLAGGTENMSAVP 448
           GVP   PA+ V  LCG   G   V   A     G++ ++ A GT+N+   P
Sbjct: 119 GVPAPAPAVAVGALCGEMKGKMVVSGGAPPAGQGSS-LAAAQGTDNVKREP 168


>03_02_0875 +
           12038365-12039329,12039417-12039593,12039651-12039893,
           12040045-12040124,12040242-12040508,12040599-12040710,
           12040757-12041071,12041357-12041366
          Length = 722

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 29/93 (31%), Positives = 37/93 (39%), Gaps = 5/93 (5%)
 Frame = +2

Query: 95  AAKRTPFGKMGG--LLKDIHPSDLLAVAAKESFKAGNVAPA-LVDTVNIGQVYSLSGTSD 265
           AA   PF   GG  LL D    + LA        AG V P   +   +  +  S      
Sbjct: 140 AANAPPFFPRGGDALLDDFELQEQLAFLHDG---AGGVNPGHALQAFDGAECRSPGPGES 196

Query: 266 GGLSPRHAALKSGVPQEKPALGVNRLC--GSGF 358
           GG+ P   A  +G P  + +  VN LC  G GF
Sbjct: 197 GGMLPYGLAWANGGPGHRRSASVNELCLGGDGF 229


>11_02_0138 -
           8708483-8709033,8709163-8709265,8709312-8709359,
           8713887-8714359,8716353-8716508,8716572-8716617,
           8716657-8716713
          Length = 477

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = +2

Query: 209 ALVDTVNIG-QVYSLSGTSDGGLSPRHAALKSGVPQEKPALGVNRLCGS 352
           A+ D ++ G  V SLS  S  G +P   A+  G+P +  A GVN L  +
Sbjct: 210 AIDDAIHDGVDVLSLSILSPTGHTPAFHAVMKGIPPDVAAPGVNILAAA 258


>02_01_0502 -
           3659564-3659660,3659923-3660061,3660161-3660238,
           3660486-3660654,3660757-3660873,3660956-3661102,
           3661203-3661388,3661472-3661720,3662196-3662432,
           3662511-3662673,3662748-3662866,3662976-3663068,
           3663595-3663735,3663813-3663896,3663974-3664084,
           3664162-3664260,3664501-3664623,3664908-3664958,
           3665152-3665275,3665357-3665514,3665595-3665709,
           3665931-3666060,3666163-3666328,3667047-3667136,
           3667650-3667857,3668270-3668439,3668542-3668577
          Length = 1199

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 28/80 (35%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
 Frame = +2

Query: 119 KMGGLLKDIH---PSDLLAVAAKESFKAG-NVAPALVDTVNIGQVYSLSGTSDGGLSPRH 286
           KM G  KD      SDLL+   KE FKA  ++ P L  TV + Q+   SG   G      
Sbjct: 12  KMTGKDKDYRYMATSDLLSELNKEGFKADQDIEPKLTTTV-LQQLEDASGDVSGLAVKCL 70

Query: 287 AALKSGVPQEKPALGVNRLC 346
           A L   V +++     N LC
Sbjct: 71  APLVKKVGEDRVVEMTNILC 90


>01_06_0115 +
           26585481-26586401,26586501-26586556,26586747-26586876,
           26587396-26587506,26587606-26587674,26588125-26588198,
           26588446-26588581,26588702-26588795,26588901-26589000,
           26589100-26589224,26589597-26589634,26589662-26589742,
           26589868-26589972,26590102-26590166,26590371-26590572,
           26591073-26591159,26591238-26591294,26591369-26591458,
           26591572-26591658,26592204-26592278,26592363-26592463,
           26592565-26592655
          Length = 964

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +1

Query: 208 CFGRHCQHWTGLFAKRNIRRW-FITPSRSPEIRRA 309
           CFGR   H  GLFA+R I+    +   R  ++RR+
Sbjct: 825 CFGRSGIHRWGLFARRGIQEGEMVLEYRGEQVRRS 859


>07_03_1133 -
           24199643-24200422,24200786-24200968,24201241-24201321,
           24201439-24201567,24201814-24201885,24201970-24202038,
           24202130-24202513,24203813-24203926,24204033-24204074
          Length = 617

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = +1

Query: 196 KCCSCFGRHCQHWTGLFAKRNIRRWFITPSRS 291
           KC   F  HC+       KRN  R+FI  + S
Sbjct: 193 KCVDGFDHHCRWLNNCIGKRNYMRFFILMTSS 224


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,363,107
Number of Sequences: 37544
Number of extensions: 496521
Number of successful extensions: 1322
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1270
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1320
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1898162308
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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