Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4k12
         (762 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC028365-1|AAH28365.1|  253|Homo sapiens hypothetical protein MG...    44   8e-04

>BC028365-1|AAH28365.1|  253|Homo sapiens hypothetical protein
           MGC26647 protein.
          Length = 253

 Score = 43.6 bits (98), Expect = 8e-04
 Identities = 47/201 (23%), Positives = 91/201 (45%), Gaps = 5/201 (2%)
 Frame = +3

Query: 147 EENFQKLGLKTYAI-RMIYIG--EHTLSKEEIIRAFEKSVHDVNSAYCEIHVYGLLLVYD 317
           +E  Q+L LK + + RM  +   +  + ++++   +E+    V   +    V GLLL+Y 
Sbjct: 34  QEEKQRLHLKKFLLDRMFLVAKIQANVERKDVADYYEQMFQSVLKHHLGEAVTGLLLIYP 93

Query: 318 SYFVHILEGSEDTLHRHLRFLFKLEIDWIERMKKSTETDRAVLLENKDKSEPKIFRRLKM 497
           +  +HILE S DT       L+K+ +D+I  +K     D  V             +++K+
Sbjct: 94  TSILHILESSSDT-------LYKVLLDYIGHVK-----DETVF----------FIQQMKI 131

Query: 498 LMVYHSISTLFFARWRALTAHPPSL-VGRLDVNGPISEHMEQLKICLNKIT-KLCDLLKA 671
           +++ H+I    F +W       P + +  +  +  + E +       +K++  LC  +K 
Sbjct: 132 IVISHNIPMRLFMQWHVSVIKVPVMYLDDVTQSQSLKEVITDFLTQTHKLSLYLCQTMKV 191

Query: 672 DEKLSFEGLNAVDPRIESLPE 734
             K   + L+ V P +  LPE
Sbjct: 192 GTKGPGDNLHQVAPDL-LLPE 211


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,998,213
Number of Sequences: 237096
Number of extensions: 2169018
Number of successful extensions: 3206
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 3130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3206
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9144232952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)