Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4k12
         (762 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81061-5|CAB02935.4|  695|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z22181-4|CAA80182.1|  824|Caenorhabditis elegans Hypothetical pr...    29   4.8  
AF026215-1|AAB71319.1|  352|Caenorhabditis elegans Serpentine re...    28   6.3  
AF002196-9|AAV34797.1|  475|Caenorhabditis elegans Hypothetical ...    28   6.3  
AF002196-8|AAB53976.2|  586|Caenorhabditis elegans Hypothetical ...    28   6.3  

>Z81061-5|CAB02935.4|  695|Caenorhabditis elegans Hypothetical
           protein F14H8.6 protein.
          Length = 695

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 14/31 (45%), Positives = 23/31 (74%)
 Frame = +3

Query: 591 NGPISEHMEQLKICLNKITKLCDLLKADEKL 683
           NGPI ++ME L+  + KITK+ D  +A++K+
Sbjct: 623 NGPIEDYMEHLEHEILKITKMID--QAEDKI 651


>Z22181-4|CAA80182.1|  824|Caenorhabditis elegans Hypothetical
           protein ZK632.5 protein.
          Length = 824

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = +3

Query: 570 LVGRLDVNGPISEHMEQLKICLNKITKLCDLLKADEKLS 686
           ++ R+DVN  ++E  E+L IC+NK+ +        EK S
Sbjct: 507 ILDRVDVNS-VTEESEELTICINKLLEQIPTTTLVEKYS 544


>AF026215-1|AAB71319.1|  352|Caenorhabditis elegans Serpentine
           receptor, class h protein83 protein.
          Length = 352

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = -1

Query: 258 VQISRTLLLFLP*IMYVHLYISYE*RMFLNQVSENFPLLH 139
           +QIS  +   +P ++Y+ L +SY+   F NQ   N  +LH
Sbjct: 255 LQISIPMGFMMPTVLYIFLSLSYK---FYNQALTNLSILH 291


>AF002196-9|AAV34797.1|  475|Caenorhabditis elegans Hypothetical
           protein C09D4.1b protein.
          Length = 475

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 13/40 (32%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
 Frame = +3

Query: 426 ETDRAVLLENKDKSEPKIFR-RLKMLMVYHSISTLFFARW 542
           +    +L+E ++K EPK+FR R  +L+++  +S    A+W
Sbjct: 18  DNHHVLLMEKQEKIEPKVFRKRWVILVIFMFLSGSNGAQW 57


>AF002196-8|AAB53976.2|  586|Caenorhabditis elegans Hypothetical
           protein C09D4.1a protein.
          Length = 586

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 13/40 (32%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
 Frame = +3

Query: 426 ETDRAVLLENKDKSEPKIFR-RLKMLMVYHSISTLFFARW 542
           +    +L+E ++K EPK+FR R  +L+++  +S    A+W
Sbjct: 129 DNHHVLLMEKQEKIEPKVFRKRWVILVIFMFLSGSNGAQW 168


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,129,815
Number of Sequences: 27780
Number of extensions: 361770
Number of successful extensions: 920
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 887
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 920
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)