Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4k12
         (762 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    23   3.1  
AF134816-1|AAD40232.1|   50|Apis mellifera unknown protein.            23   4.1  
DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.              22   7.1  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    22   7.1  
L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.          21   9.4  
DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              21   9.4  
AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding prote...    21   9.4  
AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding pro...    21   9.4  

>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = +3

Query: 198 YIGEHTLSKEEIIRAFEKSVHDVNSAYCEIHVYG 299
           +IG+H + K+E+I  +   V  + +A C   + G
Sbjct: 120 WIGDHDVDKDELITGWSAVV--ITAAICTSGIVG 151


>AF134816-1|AAD40232.1|   50|Apis mellifera unknown protein.
          Length = 50

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +1

Query: 667 RPMKSYHLRVSMLWILELNXYPKQHF*TFYCS 762
           R  K+ +    M+W L+ +  PK H  + Y S
Sbjct: 10  RRKKNLNQNQMMIWALDCSIKPKDHNGSIYWS 41


>DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 9/37 (24%), Positives = 22/37 (59%)
 Frame = +3

Query: 612 MEQLKICLNKITKLCDLLKADEKLSFEGLNAVDPRIE 722
           +E+LKI L+ + ++C      ++ + + +N V+  +E
Sbjct: 19  IEELKIQLHDVQEICKTESGIDQQTVDDINEVNFDVE 55


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +3

Query: 639 KITKLCDLLKADEKLSFEGLN 701
           K TK  +LLK   K+ FEGL+
Sbjct: 504 KPTKGTELLKYLRKVDFEGLS 524


>L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.
          Length = 150

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 3/42 (7%)
 Frame = -3

Query: 640 LLRQIFNCSMC---SEIGPFTSNLPTKDGGWAVNARHRAKNS 524
           L ++I +C +    SE  PF   L T D  W V    + K S
Sbjct: 5   LTQRINSCDLLKKRSENDPFLKRLITGDEKWVVYNNIKRKRS 46


>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 9/37 (24%), Positives = 21/37 (56%)
 Frame = +3

Query: 612 MEQLKICLNKITKLCDLLKADEKLSFEGLNAVDPRIE 722
           +E+LKI L  + ++C      ++ + + +N V+  +E
Sbjct: 19  IEELKIQLRDVQEICKAESGIDQQTVDDINEVNFDVE 55


>AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding protein
           ASP1 protein.
          Length = 144

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 12/35 (34%), Positives = 14/35 (40%)
 Frame = +2

Query: 521 HAIFRTVASINRPPAIFSWQIGRKRTNFRAHGTIE 625
           HAIF   A    PP +F      K      HGT +
Sbjct: 19  HAIFVNAAPDWVPPEVFDLVAEDKARCMSEHGTTQ 53


>AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding
           protein ASP1 protein.
          Length = 144

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 12/35 (34%), Positives = 14/35 (40%)
 Frame = +2

Query: 521 HAIFRTVASINRPPAIFSWQIGRKRTNFRAHGTIE 625
           HAIF   A    PP +F      K      HGT +
Sbjct: 19  HAIFVNAAPDWVPPEVFDLVAEDKARCMSEHGTTQ 53


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,715
Number of Sequences: 438
Number of extensions: 4882
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23789892
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)