Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4k10
         (313 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73899-8|CAA98079.2|  669|Caenorhabditis elegans Hypothetical pr...    31   0.13 
U97009-8|AAC69032.1|  534|Caenorhabditis elegans Udp-glucuronosy...    28   1.6  
AY383563-2|AAQ96594.1|  533|Caenorhabditis elegans excitatory GA...    27   2.8  
AY383563-1|AAQ96595.1|  539|Caenorhabditis elegans excitatory GA...    27   2.8  
AF098990-1|AAC67448.3|  539|Caenorhabditis elegans Expulsion def...    27   2.8  
Z82264-8|CAB05153.1|  706|Caenorhabditis elegans Hypothetical pr...    26   4.8  
Z81091-5|CAB03142.1|  768|Caenorhabditis elegans Hypothetical pr...    26   4.8  
Z78061-3|CAB60286.1|  662|Caenorhabditis elegans Hypothetical pr...    26   4.8  
AL117200-16|CAB60587.1|  662|Caenorhabditis elegans Hypothetical...    26   4.8  
AL110485-27|CAB60369.3|  515|Caenorhabditis elegans Hypothetical...    25   8.4  

>Z73899-8|CAA98079.2|  669|Caenorhabditis elegans Hypothetical
           protein ZK829.10 protein.
          Length = 669

 Score = 31.5 bits (68), Expect = 0.13
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = -3

Query: 305 YYVIYYLRIILKILVSPMGYSYYIILLFWAVLYKCAKFQLYNVS 174
           +Y +    I+  ++VSP G++YY  L  W    K  K + +N S
Sbjct: 524 FYDLIQFFILFFVIVSPFGFAYYSYLKMWHHFEKFEKEKQFNSS 567


>U97009-8|AAC69032.1|  534|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein12 protein.
          Length = 534

 Score = 27.9 bits (59), Expect = 1.6
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = -3

Query: 293 YYLRIILKILVSPMGYSYYIILLFWAVLYKC 201
           YYL ++L +LVS +  +Y  I L   VL KC
Sbjct: 496 YYLDVLLFLLVSSIVITYLAISLLKKVLGKC 526


>AY383563-2|AAQ96594.1|  533|Caenorhabditis elegans excitatory GABA
           receptor EXP-1A protein.
          Length = 533

 Score = 27.1 bits (57), Expect = 2.8
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -3

Query: 107 KNQSLLLLHEETREFMWLRKTYTWNTI 27
           KN++ L LHE    F+W   T+  N I
Sbjct: 163 KNKTELALHESYTNFLWFPDTFVPNAI 189


>AY383563-1|AAQ96595.1|  539|Caenorhabditis elegans excitatory GABA
           receptor EXP-1B protein.
          Length = 539

 Score = 27.1 bits (57), Expect = 2.8
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -3

Query: 107 KNQSLLLLHEETREFMWLRKTYTWNTI 27
           KN++ L LHE    F+W   T+  N I
Sbjct: 169 KNKTELALHESYTNFLWFPDTFVPNAI 195


>AF098990-1|AAC67448.3|  539|Caenorhabditis elegans Expulsion
           defective (defecation)protein 1 protein.
          Length = 539

 Score = 27.1 bits (57), Expect = 2.8
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -3

Query: 107 KNQSLLLLHEETREFMWLRKTYTWNTI 27
           KN++ L LHE    F+W   T+  N I
Sbjct: 169 KNKTELALHESYTNFLWFPDTFVPNAI 195


>Z82264-8|CAB05153.1|  706|Caenorhabditis elegans Hypothetical
           protein C49C3.1 protein.
          Length = 706

 Score = 26.2 bits (55), Expect = 4.8
 Identities = 11/36 (30%), Positives = 21/36 (58%)
 Frame = -3

Query: 275 LKILVSPMGYSYYIILLFWAVLYKCAKFQLYNVSRW 168
           + + VS +   YYII++ W+ +Y  A   + + S+W
Sbjct: 129 MAVAVSSLVAIYYIIIIGWSTVY-MASIVMGHTSKW 163


>Z81091-5|CAB03142.1|  768|Caenorhabditis elegans Hypothetical
           protein F55H12.1 protein.
          Length = 768

 Score = 26.2 bits (55), Expect = 4.8
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -3

Query: 242 YYIILLFWAVLYKCAKFQLYNVSR 171
           YY+IL+ W VLY    F + N+ R
Sbjct: 204 YYMILISWIVLYIINIFYVNNMGR 227


>Z78061-3|CAB60286.1|  662|Caenorhabditis elegans Hypothetical
           protein C48G7.3 protein.
          Length = 662

 Score = 26.2 bits (55), Expect = 4.8
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -1

Query: 106 KTSHYYYYMKKLENLCGYEKLILGIQ 29
           K  ++Y  MKKLENL     L+LG Q
Sbjct: 405 KMQNHYSPMKKLENLMKAVGLVLGCQ 430


>AL117200-16|CAB60587.1|  662|Caenorhabditis elegans Hypothetical
           protein C48G7.3 protein.
          Length = 662

 Score = 26.2 bits (55), Expect = 4.8
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -1

Query: 106 KTSHYYYYMKKLENLCGYEKLILGIQ 29
           K  ++Y  MKKLENL     L+LG Q
Sbjct: 405 KMQNHYSPMKKLENLMKAVGLVLGCQ 430


>AL110485-27|CAB60369.3|  515|Caenorhabditis elegans Hypothetical
           protein Y46G5A.26a protein.
          Length = 515

 Score = 25.4 bits (53), Expect = 8.4
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -3

Query: 113 KLKNQSLLLLHEETREFMWLRKTYTWNTI 27
           K KN++ + LHE    ++W   T+  N I
Sbjct: 140 KFKNKTEISLHESYSNYLWHPDTFVPNAI 168


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,908,594
Number of Sequences: 27780
Number of extensions: 131353
Number of successful extensions: 282
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 279
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 282
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 344570176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)