Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte4k09
(738 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024751-13|AAK21512.2| 488|Caenorhabditis elegans Hypothetical... 79 3e-15
Z83122-4|CAB05602.2| 664|Caenorhabditis elegans Hypothetical pr... 73 3e-13
Z75714-6|CAE54930.1| 532|Caenorhabditis elegans Hypothetical pr... 70 2e-12
Z75714-5|CAB00065.2| 581|Caenorhabditis elegans Hypothetical pr... 70 2e-12
AF098994-5|AAC67473.3| 579|Caenorhabditis elegans Hypothetical ... 66 2e-11
AF098994-4|AAO21390.1| 606|Caenorhabditis elegans Hypothetical ... 66 2e-11
Z78413-12|CAB01666.3| 448|Caenorhabditis elegans Hypothetical p... 65 6e-11
Z78411-5|CAB01647.3| 448|Caenorhabditis elegans Hypothetical pr... 65 6e-11
AC024791-18|AAT81180.1| 438|Caenorhabditis elegans Hypothetical... 65 6e-11
AC024791-16|AAF60674.3| 468|Caenorhabditis elegans Hypothetical... 65 6e-11
AC024791-15|ABQ13056.1| 464|Caenorhabditis elegans Hypothetical... 65 6e-11
Z71267-9|CAA95852.2| 380|Caenorhabditis elegans Hypothetical pr... 62 4e-10
Z71262-14|CAN99672.1| 380|Caenorhabditis elegans Hypothetical p... 62 4e-10
AF098994-3|AAT81188.1| 455|Caenorhabditis elegans Hypothetical ... 57 1e-08
AF098994-2|AAT81187.1| 505|Caenorhabditis elegans Hypothetical ... 57 1e-08
AF099003-2|AAC68743.2| 454|Caenorhabditis elegans Hypothetical ... 56 2e-08
U80448-8|AAB37821.3| 1014|Caenorhabditis elegans Hypothetical pr... 43 3e-04
Z68134-1|CAA92226.2| 492|Caenorhabditis elegans Hypothetical pr... 31 0.85
Z81054-7|CAB02881.1| 472|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z81076-8|CAB03056.1| 385|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z81575-5|CAB04631.2| 353|Caenorhabditis elegans Hypothetical pr... 28 7.9
>AC024751-13|AAK21512.2| 488|Caenorhabditis elegans Hypothetical
protein Y18H1A.9 protein.
Length = 488
Score = 79.0 bits (186), Expect = 3e-15
Identities = 36/107 (33%), Positives = 62/107 (57%), Gaps = 5/107 (4%)
Frame = +3
Query: 429 IYDFLDALERQYPSICTVTVIGNTVEGRDVKVR*MLKISNSNARNT--AVWLDGTIHARE 602
+ ++L++L YP + +V IG T EGR + ++KI+N T +W+DG IHARE
Sbjct: 131 VINYLNSLAITYPELVSVQPIGTTHEGRQIP---LIKITNKRNGGTKRGIWVDGGIHARE 187
Query: 603 WISTSVVTYIADHIARSFN---TLPDYITNKDWFFVPVVNPDGYYHT 734
W+S S V Y + ++ + ++ +W+ VP++NPDGY ++
Sbjct: 188 WVSPSTVLYFIHQLVTQYDKDVQIKQFVDQLEWYIVPLLNPDGYEYS 234
>Z83122-4|CAB05602.2| 664|Caenorhabditis elegans Hypothetical
protein R11A5.7 protein.
Length = 664
Score = 72.5 bits (170), Expect = 3e-13
Identities = 36/103 (34%), Positives = 58/103 (56%), Gaps = 4/103 (3%)
Frame = +3
Query: 438 FLDALERQYPSICTVTVIGNTVEGRDVKVR*MLKI-SNSNARNTAVWLDGTIHAREWIST 614
++ +E YP I + IG T EG+ ++ LKI + S+ + AVW+DG IHAREW S+
Sbjct: 170 YMRTIEFYYPRIAKIVRIGATHEGKPIEG---LKIGARSSHKKRAVWVDGNIHAREWASS 226
Query: 615 SVVTYIADHIARSFN---TLPDYITNKDWFFVPVVNPDGYYHT 734
Y + + + + +Y+ D++ VP +NPDGY +T
Sbjct: 227 HTALYFINQLVSEYGKDAQITNYVDTLDFYIVPCLNPDGYEYT 269
>Z75714-6|CAE54930.1| 532|Caenorhabditis elegans Hypothetical
protein ZC434.9b protein.
Length = 532
Score = 69.7 bits (163), Expect = 2e-12
Identities = 46/187 (24%), Positives = 85/187 (45%), Gaps = 11/187 (5%)
Frame = +3
Query: 207 KERHSAMDVIVEGTRTMQVEKLLRERDISFDVVTNDITXXXXXXXXXXXXXXXXXXXXXI 386
K H A D++V+ R ++ +L+ +IS+DV+ D+ +
Sbjct: 68 KVGHRA-DIMVDEDRMEWLDSVLKNSNISYDVIIEDVGKLILEKEHGPPRFSNLLFSKRM 126
Query: 387 ------KKSLDWKDFYPLNVIYDFLDALERQYPSICTVTVIGNTVEGRDVKVR*MLKISN 548
+ + +++ I D++ +ER+YP V +G T EGR ++ +KI +
Sbjct: 127 HNEGGNRARYGFGEYHSYQTICDWMKDIERKYPDKAKVFTMGTTSEGRPIQG---IKIGS 183
Query: 549 SNARNTA--VWLDGTIHAREWISTSVVTYIADHIARSFN---TLPDYITNKDWFFVPVVN 713
RN W+DG IHAREW + + D + +N + + +++ +PV N
Sbjct: 184 QVWRNDKRIFWIDGGIHAREWAAVHTALWFIDRLIADYNDDSLVRAAVDRLNFYILPVAN 243
Query: 714 PDGYYHT 734
PDGY ++
Sbjct: 244 PDGYEYS 250
>Z75714-5|CAB00065.2| 581|Caenorhabditis elegans Hypothetical
protein ZC434.9a protein.
Length = 581
Score = 69.7 bits (163), Expect = 2e-12
Identities = 46/187 (24%), Positives = 85/187 (45%), Gaps = 11/187 (5%)
Frame = +3
Query: 207 KERHSAMDVIVEGTRTMQVEKLLRERDISFDVVTNDITXXXXXXXXXXXXXXXXXXXXXI 386
K H A D++V+ R ++ +L+ +IS+DV+ D+ +
Sbjct: 68 KVGHRA-DIMVDEDRMEWLDSVLKNSNISYDVIIEDVGKLILEKEHGPPRFSNLLFSKRM 126
Query: 387 ------KKSLDWKDFYPLNVIYDFLDALERQYPSICTVTVIGNTVEGRDVKVR*MLKISN 548
+ + +++ I D++ +ER+YP V +G T EGR ++ +KI +
Sbjct: 127 HNEGGNRARYGFGEYHSYQTICDWMKDIERKYPDKAKVFTMGTTSEGRPIQG---IKIGS 183
Query: 549 SNARNTA--VWLDGTIHAREWISTSVVTYIADHIARSFN---TLPDYITNKDWFFVPVVN 713
RN W+DG IHAREW + + D + +N + + +++ +PV N
Sbjct: 184 QVWRNDKRIFWIDGGIHAREWAAVHTALWFIDRLIADYNDDSLVRAAVDRLNFYILPVAN 243
Query: 714 PDGYYHT 734
PDGY ++
Sbjct: 244 PDGYEYS 250
>AF098994-5|AAC67473.3| 579|Caenorhabditis elegans Hypothetical
protein T06A4.1a protein.
Length = 579
Score = 66.1 bits (154), Expect = 2e-11
Identities = 33/108 (30%), Positives = 59/108 (54%), Gaps = 3/108 (2%)
Frame = +3
Query: 420 LNVIYDFLDALERQYPSICTVTVIGNTVEGRDVKVR*MLKISNSNARNTAVWLDGTIHAR 599
L I + L+++YP++ T+ IG + E R + V + N ++W+D IHAR
Sbjct: 131 LEEIQTEMKRLKKEYPTMITLIDIGQSHENRTLLVMKITGKRNPLGSKISMWIDAGIHAR 190
Query: 600 EWISTSVVTYIADHIARSFN---TLPDYITNKDWFFVPVVNPDGYYHT 734
EWI+ + YIA + + T+ + + D++ +PV+NPDGY ++
Sbjct: 191 EWIAPATAMYIAHELLLGYENDATVAKLMDHIDFYILPVMNPDGYEYS 238
>AF098994-4|AAO21390.1| 606|Caenorhabditis elegans Hypothetical
protein T06A4.1b protein.
Length = 606
Score = 66.1 bits (154), Expect = 2e-11
Identities = 33/108 (30%), Positives = 59/108 (54%), Gaps = 3/108 (2%)
Frame = +3
Query: 420 LNVIYDFLDALERQYPSICTVTVIGNTVEGRDVKVR*MLKISNSNARNTAVWLDGTIHAR 599
L I + L+++YP++ T+ IG + E R + V + N ++W+D IHAR
Sbjct: 131 LEEIQTEMKRLKKEYPTMITLIDIGQSHENRTLLVMKITGKRNPLGSKISMWIDAGIHAR 190
Query: 600 EWISTSVVTYIADHIARSFN---TLPDYITNKDWFFVPVVNPDGYYHT 734
EWI+ + YIA + + T+ + + D++ +PV+NPDGY ++
Sbjct: 191 EWIAPATAMYIAHELLLGYENDATVAKLMDHIDFYILPVMNPDGYEYS 238
>Z78413-12|CAB01666.3| 448|Caenorhabditis elegans Hypothetical
protein F02D8.4 protein.
Length = 448
Score = 64.9 bits (151), Expect = 6e-11
Identities = 35/99 (35%), Positives = 55/99 (55%)
Frame = +3
Query: 438 FLDALERQYPSICTVTVIGNTVEGRDVKVR*MLKISNSNARNTAVWLDGTIHAREWISTS 617
FL++L +QYP+ + IGN+ EGR + ++I++ + VW+D IHAREWIS +
Sbjct: 128 FLNSLAQQYPNDVKLQNIGNSYEGRSITA---VRIADDGSSKPIVWIDAGIHAREWISYN 184
Query: 618 VVTYIADHIARSFNTLPDYITNKDWFFVPVVNPDGYYHT 734
V Y+ I S + + + VP NPDGY ++
Sbjct: 185 VALYLIYTIV-SQPAYRNLLDSVQLVVVPNTNPDGYEYS 222
>Z78411-5|CAB01647.3| 448|Caenorhabditis elegans Hypothetical
protein F02D8.4 protein.
Length = 448
Score = 64.9 bits (151), Expect = 6e-11
Identities = 35/99 (35%), Positives = 55/99 (55%)
Frame = +3
Query: 438 FLDALERQYPSICTVTVIGNTVEGRDVKVR*MLKISNSNARNTAVWLDGTIHAREWISTS 617
FL++L +QYP+ + IGN+ EGR + ++I++ + VW+D IHAREWIS +
Sbjct: 128 FLNSLAQQYPNDVKLQNIGNSYEGRSITA---VRIADDGSSKPIVWIDAGIHAREWISYN 184
Query: 618 VVTYIADHIARSFNTLPDYITNKDWFFVPVVNPDGYYHT 734
V Y+ I S + + + VP NPDGY ++
Sbjct: 185 VALYLIYTIV-SQPAYRNLLDSVQLVVVPNTNPDGYEYS 222
>AC024791-18|AAT81180.1| 438|Caenorhabditis elegans Hypothetical
protein Y47G6A.19b protein.
Length = 438
Score = 64.9 bits (151), Expect = 6e-11
Identities = 34/112 (30%), Positives = 55/112 (49%), Gaps = 3/112 (2%)
Frame = +3
Query: 408 DFYPLNVIYDFLDALERQYPSICTVTVIGNTVEGRDVKVR*MLKISNSNARNTAVWLDGT 587
++Y +V+ +L+ + P I + +G T+EGRD+ LK V +D
Sbjct: 95 EYYSYSVLSTWLERIAENMPDIAKLIKVGTTIEGRDIL---GLKFGKDTPDKKIVVIDAG 151
Query: 588 IHAREWISTSVVTYIADHIARSFNTLP---DYITNKDWFFVPVVNPDGYYHT 734
IHAREW + +Y + I P +Y+ N + +PV+NPDGY +T
Sbjct: 152 IHAREWAAIHTASYFINLIVNGREEDPQIQNYLDNIVLYIIPVLNPDGYEYT 203
>AC024791-16|AAF60674.3| 468|Caenorhabditis elegans Hypothetical
protein Y47G6A.19a protein.
Length = 468
Score = 64.9 bits (151), Expect = 6e-11
Identities = 34/112 (30%), Positives = 55/112 (49%), Gaps = 3/112 (2%)
Frame = +3
Query: 408 DFYPLNVIYDFLDALERQYPSICTVTVIGNTVEGRDVKVR*MLKISNSNARNTAVWLDGT 587
++Y +V+ +L+ + P I + +G T+EGRD+ LK V +D
Sbjct: 95 EYYSYSVLSTWLERIAENMPDIAKLIKVGTTIEGRDIL---GLKFGKDTPDKKIVVIDAG 151
Query: 588 IHAREWISTSVVTYIADHIARSFNTLP---DYITNKDWFFVPVVNPDGYYHT 734
IHAREW + +Y + I P +Y+ N + +PV+NPDGY +T
Sbjct: 152 IHAREWAAIHTASYFINLIVNGREEDPQIQNYLDNIVLYIIPVLNPDGYEYT 203
>AC024791-15|ABQ13056.1| 464|Caenorhabditis elegans Hypothetical
protein Y47G6A.19c protein.
Length = 464
Score = 64.9 bits (151), Expect = 6e-11
Identities = 34/112 (30%), Positives = 55/112 (49%), Gaps = 3/112 (2%)
Frame = +3
Query: 408 DFYPLNVIYDFLDALERQYPSICTVTVIGNTVEGRDVKVR*MLKISNSNARNTAVWLDGT 587
++Y +V+ +L+ + P I + +G T+EGRD+ LK V +D
Sbjct: 95 EYYSYSVLSTWLERIAENMPDIAKLIKVGTTIEGRDIL---GLKFGKDTPDKKIVVIDAG 151
Query: 588 IHAREWISTSVVTYIADHIARSFNTLP---DYITNKDWFFVPVVNPDGYYHT 734
IHAREW + +Y + I P +Y+ N + +PV+NPDGY +T
Sbjct: 152 IHAREWAAIHTASYFINLIVNGREEDPQIQNYLDNIVLYIIPVLNPDGYEYT 203
>Z71267-9|CAA95852.2| 380|Caenorhabditis elegans Hypothetical
protein W01A8.6 protein.
Length = 380
Score = 62.1 bits (144), Expect = 4e-10
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 3/103 (2%)
Frame = +3
Query: 435 DFLDALERQYPSICTVTVIGNTVEGRDVKVR*MLKISNSNARNTAVWLDGTIHAREWIST 614
D++ + PS + IG T EGR + + K + R AVWLDG HAREW +
Sbjct: 43 DYIKGVAHDNPSFVQLKTIGRTREGRPLLGVRIGKPALPGKRKIAVWLDGGNHAREWPAF 102
Query: 615 SVVTYIADHIARSF---NTLPDYITNKDWFFVPVVNPDGYYHT 734
V Y + + + + + Y+ D + PV+NPDG+ ++
Sbjct: 103 HVAVYFIEKLVNGYLSDDKITKYVETLDIYVFPVLNPDGFVYS 145
>Z71262-14|CAN99672.1| 380|Caenorhabditis elegans Hypothetical
protein W01A8.6 protein.
Length = 380
Score = 62.1 bits (144), Expect = 4e-10
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 3/103 (2%)
Frame = +3
Query: 435 DFLDALERQYPSICTVTVIGNTVEGRDVKVR*MLKISNSNARNTAVWLDGTIHAREWIST 614
D++ + PS + IG T EGR + + K + R AVWLDG HAREW +
Sbjct: 43 DYIKGVAHDNPSFVQLKTIGRTREGRPLLGVRIGKPALPGKRKIAVWLDGGNHAREWPAF 102
Query: 615 SVVTYIADHIARSF---NTLPDYITNKDWFFVPVVNPDGYYHT 734
V Y + + + + + Y+ D + PV+NPDG+ ++
Sbjct: 103 HVAVYFIEKLVNGYLSDDKITKYVETLDIYVFPVLNPDGFVYS 145
>AF098994-3|AAT81188.1| 455|Caenorhabditis elegans Hypothetical
protein T06A4.3b protein.
Length = 455
Score = 57.2 bits (132), Expect = 1e-08
Identities = 41/180 (22%), Positives = 70/180 (38%), Gaps = 4/180 (2%)
Frame = +3
Query: 207 KERHSAMDVIVEGTRTMQVEKLLRERDISFDVVTNDITXXXXXXXXXXXXXXXXXXXXXI 386
K++H DV+V+ + L+ DIS+ +D+
Sbjct: 58 KDKHGFWDVMVDMKNSKYFLDFLQVNDISYIKTIDDVEGLITKHENNKTLSNMFPRLWDD 117
Query: 387 KKSL--DWKDFYPLNVIYDFLDALERQYPSICTVTVIGNTVEGRDVKVR*MLKISNSNAR 560
S D+ + + D++ L +YP + IG T EGR++ ++I +
Sbjct: 118 SSSAHYDFHTYGSYQRMTDWMKQLVVKYPKMVQYISIGKTTEGRNIDG---VEIGGDSRT 174
Query: 561 NTAVWLDGTIHAREWISTSVVTYIADHIARSFNT--LPDYITNKDWFFVPVVNPDGYYHT 734
W+DG IHAREW + + + N + + + VP +NPDGY T
Sbjct: 175 KKIFWIDGGIHAREWAAPHTALFFIHQLTSRANEPGIKKLLNEITFVVVPCLNPDGYEFT 234
>AF098994-2|AAT81187.1| 505|Caenorhabditis elegans Hypothetical
protein T06A4.3a protein.
Length = 505
Score = 57.2 bits (132), Expect = 1e-08
Identities = 41/180 (22%), Positives = 70/180 (38%), Gaps = 4/180 (2%)
Frame = +3
Query: 207 KERHSAMDVIVEGTRTMQVEKLLRERDISFDVVTNDITXXXXXXXXXXXXXXXXXXXXXI 386
K++H DV+V+ + L+ DIS+ +D+
Sbjct: 58 KDKHGFWDVMVDMKNSKYFLDFLQVNDISYIKTIDDVEGLITKHENNKTLSNMFPRLWDD 117
Query: 387 KKSL--DWKDFYPLNVIYDFLDALERQYPSICTVTVIGNTVEGRDVKVR*MLKISNSNAR 560
S D+ + + D++ L +YP + IG T EGR++ ++I +
Sbjct: 118 SSSAHYDFHTYGSYQRMTDWMKQLVVKYPKMVQYISIGKTTEGRNIDG---VEIGGDSRT 174
Query: 561 NTAVWLDGTIHAREWISTSVVTYIADHIARSFNT--LPDYITNKDWFFVPVVNPDGYYHT 734
W+DG IHAREW + + + N + + + VP +NPDGY T
Sbjct: 175 KKIFWIDGGIHAREWAAPHTALFFIHQLTSRANEPGIKKLLNEITFVVVPCLNPDGYEFT 234
>AF099003-2|AAC68743.2| 454|Caenorhabditis elegans Hypothetical
protein Y59C2A.1 protein.
Length = 454
Score = 56.4 bits (130), Expect = 2e-08
Identities = 29/118 (24%), Positives = 54/118 (45%), Gaps = 3/118 (2%)
Frame = +3
Query: 390 KSLDWKDFYPLNVIYDFLDALERQYPSICTVTVIGNTVEGRDVKVR*MLKISNSNARNTA 569
+ D ++ N + +F+ L Q + + + + EGR + + S +
Sbjct: 140 QEFDTNAYHSYNEMVEFMKLLSEQKSDMVEMVKVATSSEGRSIYGVKIHPPGPSPPEKPS 199
Query: 570 VWLDGTIHAREWISTSVVTYIADHIARSFNTLPDYITNK---DWFFVPVVNPDGYYHT 734
+ +D +HAREWI+ +V ++ I + P N DW+ +P VNPDGY ++
Sbjct: 200 IIVDAGVHAREWIAPAVGLFMIRKIVEEYGRNPQVTANLQKFDWYIMPQVNPDGYEYS 257
>U80448-8|AAB37821.3| 1014|Caenorhabditis elegans Hypothetical
protein F59A3.1 protein.
Length = 1014
Score = 42.7 bits (96), Expect = 3e-04
Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 4/105 (3%)
Frame = +3
Query: 423 NVIYDFLDALERQYPSICTVTVIGNTVEGRDVKVR*ML-KISNSNARNTAVWLDGTIHAR 599
N + +L A YP+I + G +VEGR++ V + K + + G +H
Sbjct: 82 NEMTAWLKATRLNYPNITHLYSAGKSVEGRELWVLIISDKPKEHKLMEPELKIVGNMHGN 141
Query: 600 EWISTSVVTYIADHIARSFNT---LPDYITNKDWFFVPVVNPDGY 725
E + V Y+A+ + ++ L D + N +P +NPDGY
Sbjct: 142 EVVGREAVLYLAEILCLNYGKNKYLTDLVNNARIHLMPSMNPDGY 186
>Z68134-1|CAA92226.2| 492|Caenorhabditis elegans Hypothetical
protein T27A8.1 protein.
Length = 492
Score = 31.1 bits (67), Expect = 0.85
Identities = 20/107 (18%), Positives = 49/107 (45%), Gaps = 4/107 (3%)
Frame = +3
Query: 423 NVIYDFLDALERQYPSICTVTVIGNTVEGRDVKVR*MLKISNSNARNTAVW-LDGTIHAR 599
+ + D + L R++P++ + G +V+GR++ V + + + + + +H
Sbjct: 62 STLTDHIHNLHRKFPNLTHIYSAGQSVQGRELWVLVVSRYPIEHRKLIPEFKYVANMHGN 121
Query: 600 EWISTSVVTYIADHIARSFNT---LPDYITNKDWFFVPVVNPDGYYH 731
E + +A + ++N+ + + + +P +NPDGY H
Sbjct: 122 EVTGRVFLVSLAHTLLENYNSNLWIRQLVDSTRIHLMPSMNPDGYEH 168
>Z81054-7|CAB02881.1| 472|Caenorhabditis elegans Hypothetical
protein F01D4.4 protein.
Length = 472
Score = 30.7 bits (66), Expect = 1.1
Identities = 26/118 (22%), Positives = 48/118 (40%), Gaps = 5/118 (4%)
Frame = +3
Query: 387 KKSLDWKDFYPLNVIYDFLDALERQYPSICTVTVIGNTVEGRD-VKVR*MLKISNSNARN 563
K +W ++ + L + + P I T+ IG +VEGR V ++
Sbjct: 32 KDDAEWGHYHNQAQLEAKLGEINEKCPEITTLYEIGQSVEGRPLVVIQFSTTPGEHIPTK 91
Query: 564 TAVWLDGTIHAREWISTSVVTYIADHIAR-SFNT---LPDYITNKDWFFVPVVNPDGY 725
V L G +H E I ++ A+ + + N + + + +P +NPDG+
Sbjct: 92 PEVKLIGNMHGNEPIGRELLLRFAETLCNGAINNDKEIVQLLNSTSIHILPSMNPDGF 149
>Z81076-8|CAB03056.1| 385|Caenorhabditis elegans Hypothetical
protein F35C5.7 protein.
Length = 385
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -2
Query: 584 PVQPNSCISGVTI*NFQHLSNLDIPAFHCIANNGYRANRRVL 459
P PN+ + + N QH SNLD+ + I NGYR N +
Sbjct: 334 PTYPNTPFTNTVVVNHQHNSNLDV-GWQNI--NGYRENENYM 372
>Z81575-5|CAB04631.2| 353|Caenorhabditis elegans Hypothetical
protein R08H2.5 protein.
Length = 353
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 594 AREWISTSVVTYIADHIARSFNTLPDYIT 680
A+E+ +TSV+ + DH R + LP IT
Sbjct: 190 AQEFFTTSVLVVLIDHDMRKYAILPSAIT 218
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,450,058
Number of Sequences: 27780
Number of extensions: 346809
Number of successful extensions: 898
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 845
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 868
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -