Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4k04
         (699 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S57284-1|AAB25906.1|  437|Caenorhabditis elegans S-adenosylhomoc...   262   2e-70
M64306-1|AAA28062.1|  437|Caenorhabditis elegans S-adenosylhomoc...   262   2e-70
AF043699-5|AAB97565.1|  437|Caenorhabditis elegans Hypothetical ...   262   2e-70
AC006659-2|AAF39883.2|  977|Caenorhabditis elegans Hypothetical ...    29   2.4  
U50199-6|AAA91266.1|  470|Caenorhabditis elegans Vacuolar h atpa...    29   3.2  
AF067219-9|AAX88822.1|  266|Caenorhabditis elegans Innexin prote...    28   7.4  

>S57284-1|AAB25906.1|  437|Caenorhabditis elegans
           S-adenosylhomocysteine hydrolase protein.
          Length = 437

 Score =  262 bits (642), Expect = 2e-70
 Identities = 119/161 (73%), Positives = 138/161 (85%)
 Frame = +3

Query: 216 YILADEKLAEWGRKEIMLAEKEMPGLMACRRKYAPAKILKGARIAGSLHMTVQTAVLIET 395
           Y +AD KLA++GRKEI+LAE EMPGLMA R KY P++ LKGARIAG LHMT+QTAVLIET
Sbjct: 8   YKVADIKLADFGRKEIILAENEMPGLMAMRSKYGPSQPLKGARIAGCLHMTIQTAVLIET 67

Query: 396 LIELGAEVQWSSSNIYSTQDEAAAALVAVGIPIYAWKGETDDEYIWCIEQTLIFPDGKPL 575
           L  LGAEVQWSS NI+STQD AAAA+   G+P+YAWKGETD+EY WCIEQT++F DG+PL
Sbjct: 68  LTALGAEVQWSSCNIFSTQDHAAAAIAQTGVPVYAWKGETDEEYEWCIEQTIVFKDGQPL 127

Query: 576 NMILDDGGDLTNLVHTKYPDLLKDVKGITEETTTGVHNLYK 698
           NMILDDGGDLTNLVH KYP  L  ++G++EETTTGVHNL K
Sbjct: 128 NMILDDGGDLTNLVHAKYPQYLAGIRGLSEETTTGVHNLAK 168


>M64306-1|AAA28062.1|  437|Caenorhabditis elegans
           S-adenosylhomocysteine hydrolase protein.
          Length = 437

 Score =  262 bits (642), Expect = 2e-70
 Identities = 119/161 (73%), Positives = 138/161 (85%)
 Frame = +3

Query: 216 YILADEKLAEWGRKEIMLAEKEMPGLMACRRKYAPAKILKGARIAGSLHMTVQTAVLIET 395
           Y +AD KLA++GRKEI+LAE EMPGLMA R KY P++ LKGARIAG LHMT+QTAVLIET
Sbjct: 8   YKVADIKLADFGRKEIILAENEMPGLMAMRSKYGPSQPLKGARIAGCLHMTIQTAVLIET 67

Query: 396 LIELGAEVQWSSSNIYSTQDEAAAALVAVGIPIYAWKGETDDEYIWCIEQTLIFPDGKPL 575
           L  LGAEVQWSS NI+STQD AAAA+   G+P+YAWKGETD+EY WCIEQT++F DG+PL
Sbjct: 68  LTALGAEVQWSSCNIFSTQDHAAAAIAQTGVPVYAWKGETDEEYEWCIEQTIVFKDGQPL 127

Query: 576 NMILDDGGDLTNLVHTKYPDLLKDVKGITEETTTGVHNLYK 698
           NMILDDGGDLTNLVH KYP  L  ++G++EETTTGVHNL K
Sbjct: 128 NMILDDGGDLTNLVHAKYPQYLAGIRGLSEETTTGVHNLAK 168


>AF043699-5|AAB97565.1|  437|Caenorhabditis elegans Hypothetical
           protein K02F2.2 protein.
          Length = 437

 Score =  262 bits (642), Expect = 2e-70
 Identities = 119/161 (73%), Positives = 138/161 (85%)
 Frame = +3

Query: 216 YILADEKLAEWGRKEIMLAEKEMPGLMACRRKYAPAKILKGARIAGSLHMTVQTAVLIET 395
           Y +AD KLA++GRKEI+LAE EMPGLMA R KY P++ LKGARIAG LHMT+QTAVLIET
Sbjct: 8   YKVADIKLADFGRKEIILAENEMPGLMAMRSKYGPSQPLKGARIAGCLHMTIQTAVLIET 67

Query: 396 LIELGAEVQWSSSNIYSTQDEAAAALVAVGIPIYAWKGETDDEYIWCIEQTLIFPDGKPL 575
           L  LGAEVQWSS NI+STQD AAAA+   G+P+YAWKGETD+EY WCIEQT++F DG+PL
Sbjct: 68  LTALGAEVQWSSCNIFSTQDHAAAAIAQTGVPVYAWKGETDEEYEWCIEQTIVFKDGQPL 127

Query: 576 NMILDDGGDLTNLVHTKYPDLLKDVKGITEETTTGVHNLYK 698
           NMILDDGGDLTNLVH KYP  L  ++G++EETTTGVHNL K
Sbjct: 128 NMILDDGGDLTNLVHAKYPQYLAGIRGLSEETTTGVHNLAK 168


>AC006659-2|AAF39883.2|  977|Caenorhabditis elegans Hypothetical
           protein H16O14.1 protein.
          Length = 977

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = -2

Query: 470 CSCGLVLCTI-NVTAGPLYLCSQFY*SLNKNRCLYCHV*AAGYSGTFEYFSWSI 312
           C CG+++  I N+TA         Y  +N    L   + + G+   F YF WS+
Sbjct: 442 CECGILIAVIENITALITQFFLMCYLGVNAACALQSLLKSPGWRPGFRYFHWSL 495


>U50199-6|AAA91266.1|  470|Caenorhabditis elegans Vacuolar h atpase
           protein 15 protein.
          Length = 470

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = +3

Query: 630 PDLLKDVKGITEETTTGVHNL 692
           PDL  DVK +TEE T  VH+L
Sbjct: 316 PDLEDDVKFLTEELTLSVHDL 336


>AF067219-9|AAX88822.1|  266|Caenorhabditis elegans Innexin protein
           17, isoform b protein.
          Length = 266

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 21/88 (23%), Positives = 36/88 (40%), Gaps = 1/88 (1%)
 Frame = -2

Query: 320 WSIFPTTCHKAWHFFLC*HNFFSAPFSQFLVS*N-VYMVNFTKSNLARALYYATSAFL*K 144
           W    TTC  A  F      F S  F  + +    +Y    TK  L    +  + +F   
Sbjct: 176 WGSRLTTCILATKFLATILIFISMGFLDYFMGLGPMYGWTITKDILQGRQWQESGSFPRV 235

Query: 143 TYCIFKYVQIQYIFNKKSYLLFKLNVRH 60
           T+C F+  ++ Y+ N     +  +N+R+
Sbjct: 236 TFCDFQVRELGYVNNWSLQCVLMVNIRN 263


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,393,624
Number of Sequences: 27780
Number of extensions: 363042
Number of successful extensions: 849
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 849
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)