Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4k03
         (708 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    25   3.1  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    24   4.1  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    23   7.1  
AF515523-1|AAM61890.1|  222|Anopheles gambiae glutathione S-tran...    23   9.4  

>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +1

Query: 202 VMMELEESVSDSKLHKESTAKKDLRPSSAISF 297
           + M +   +S+ K HK S   KD +  + +SF
Sbjct: 834 MQMNIRRMISEKKHHKRSKRVKDGKQQNHVSF 865


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
 Frame = +1

Query: 154 RSQKFQKREGRTRSM-AVMMELEESVSDSKLHKESTAKKDLRPSSAISFSKSDHGPETTS 330
           R  +F  +E R + +   +  L + + D K+  ++  + DL+   A          E T 
Sbjct: 381 RGSQFSSKEERDKWIQGELKSLNKQIKD-KISHQNKLQDDLKKDIAKQGELEKKIQEHTE 439

Query: 331 STEQLRQYKSWVSNERWNELKK 396
           S EQLR  +    N+ + ELKK
Sbjct: 440 SFEQLR-VQIDEHNKNFYELKK 460


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 23.4 bits (48), Expect = 7.1
 Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 5/30 (16%)
 Frame = -3

Query: 217 LIPSLQPWI-----SFYLHVSETFVTGSAF 143
           LIP++QPWI     +   H+S+ F++G  F
Sbjct: 875 LIPNIQPWITRRHGNIEFHMSQ-FLSGHGF 903


>AF515523-1|AAM61890.1|  222|Anopheles gambiae glutathione
           S-transferase u2 protein.
          Length = 222

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -1

Query: 621 INRVMFHELVEYHSFYFG 568
           INRV+ H+L  ++  +FG
Sbjct: 96  INRVLHHDLGSFYPKFFG 113


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 714,844
Number of Sequences: 2352
Number of extensions: 13871
Number of successful extensions: 77
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 77
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72340815
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)