Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte4j24
(685 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024878-2|AAK85512.1| 345|Caenorhabditis elegans Hypothetical ... 105 4e-23
Z81493-7|CAE46664.1| 342|Caenorhabditis elegans Hypothetical pr... 37 0.012
Z81493-6|CAB04038.1| 335|Caenorhabditis elegans Hypothetical pr... 37 0.012
Z75712-10|CAB00039.2| 332|Caenorhabditis elegans Hypothetical p... 36 0.020
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 30 1.3
AC024859-7|AAK29968.1| 550|Caenorhabditis elegans Hypothetical ... 29 2.3
Z36238-8|CAH04738.1| 448|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z36238-7|CAA85278.2| 506|Caenorhabditis elegans Hypothetical pr... 29 3.1
AC024817-2|AAU87810.1| 520|Caenorhabditis elegans Hypothetical ... 28 5.4
U88308-18|AAK68217.1| 198|Caenorhabditis elegans Uncoordinated ... 27 9.4
U88308-17|AAK68214.1| 657|Caenorhabditis elegans Uncoordinated ... 27 9.4
U88308-16|AAK68212.1| 586|Caenorhabditis elegans Uncoordinated ... 27 9.4
U88308-14|AAK68213.1| 546|Caenorhabditis elegans Uncoordinated ... 27 9.4
U88308-13|AAK68215.1| 534|Caenorhabditis elegans Uncoordinated ... 27 9.4
AF144262-1|AAD37370.1| 289|Caenorhabditis elegans AP180-like ad... 27 9.4
AF144259-1|AAD37367.1| 546|Caenorhabditis elegans AP180-like ad... 27 9.4
AF144257-1|AAD37365.1| 586|Caenorhabditis elegans AP180-like ad... 27 9.4
>AC024878-2|AAK85512.1| 345|Caenorhabditis elegans Hypothetical
protein Y97E10AL.2 protein.
Length = 345
Score = 105 bits (251), Expect = 4e-23
Identities = 61/161 (37%), Positives = 93/161 (57%), Gaps = 5/161 (3%)
Frame = +3
Query: 198 VAVLPLMFRYNKTVQRKVVFSNCINFPRNLNYDSPSSCSV-TCGRNLNIEFRSIVDNFLI 374
V LP++ + + + F N P N +Y+ +S +V + GR+L++ +S
Sbjct: 24 VIFLPILVYFLPRYTQFIFFLNFRRLP-NTDYNDLASNNVKSIGRSLHLPGKSG------ 76
Query: 375 RLGIWHILPNS---EIKDVADLKTNNTFHEL-KNSRNPVILYCHGNSNHRASPHRLKIYS 542
R+G+WHILPN E + T F ++ ++S N +I Y HGNS R HR+++Y+
Sbjct: 77 RIGVWHILPNKLSLEWRTEGKHPTERDFDDMMRDSENQIIFYAHGNSFDRTFYHRVEMYN 136
Query: 543 VFQELNFHVVTFDYRGYGDSTKVKPTERGVVEDLFHVYSWL 665
+ + N+HVV FDYRGYGDS + PTE+G+VED VY WL
Sbjct: 137 LLSDCNYHVVCFDYRGYGDS-EGTPTEKGIVEDTKTVYEWL 176
>Z81493-7|CAE46664.1| 342|Caenorhabditis elegans Hypothetical
protein F01D5.7b protein.
Length = 342
Score = 37.1 bits (82), Expect = 0.012
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Frame = +3
Query: 441 NTFHELKNSRNPVILYCHGNSNHRAS---PHRLKIYSVFQEL-NFHVVTFDYRGYGDSTK 608
N + + N V+L+C +S S P+ + +S F L V FDY GYG S+
Sbjct: 110 NCYSKNPEVANQVVLFCQSSSADLGSFLQPNSMN-FSTFANLFETDVYAFDYSGYGFSSG 168
Query: 609 VKPTERGVVEDLFHVYSWLLKT 674
+ +E+ + D+ VY +LKT
Sbjct: 169 TQ-SEKNMYADVRAVYEHILKT 189
>Z81493-6|CAB04038.1| 335|Caenorhabditis elegans Hypothetical
protein F01D5.7a protein.
Length = 335
Score = 37.1 bits (82), Expect = 0.012
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Frame = +3
Query: 441 NTFHELKNSRNPVILYCHGNSNHRAS---PHRLKIYSVFQEL-NFHVVTFDYRGYGDSTK 608
N + + N V+L+C +S S P+ + +S F L V FDY GYG S+
Sbjct: 110 NCYSKNPEVANQVVLFCQSSSADLGSFLQPNSMN-FSTFANLFETDVYAFDYSGYGFSSG 168
Query: 609 VKPTERGVVEDLFHVYSWLLKT 674
+ +E+ + D+ VY +LKT
Sbjct: 169 TQ-SEKNMYADVRAVYEHILKT 189
>Z75712-10|CAB00039.2| 332|Caenorhabditis elegans Hypothetical
protein K04G2.2 protein.
Length = 332
Score = 36.3 bits (80), Expect = 0.020
Identities = 22/65 (33%), Positives = 36/65 (55%)
Frame = +3
Query: 480 ILYCHGNSNHRASPHRLKIYSVFQELNFHVVTFDYRGYGDSTKVKPTERGVVEDLFHVYS 659
+L+ HGN+ +Y + LN +V ++DY GYG ST KP+E+ + D+ +
Sbjct: 115 LLFSHGNAVDLGQMTSF-LYGLGFHLNCNVFSYDYSGYGCSTG-KPSEKNLYADITAAFE 172
Query: 660 WLLKT 674
LLK+
Sbjct: 173 -LLKS 176
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -1
Query: 214 RGSTATWNTRTPAVSEAPVAKRSPKTMLRRKYST 113
RGSTA TR P + AP A R+P R +T
Sbjct: 298 RGSTAAPGTRAPPATRAPPATRAPPATTRAPPAT 331
>AC024859-7|AAK29968.1| 550|Caenorhabditis elegans Hypothetical
protein Y71H2AM.13 protein.
Length = 550
Score = 29.5 bits (63), Expect = 2.3
Identities = 28/109 (25%), Positives = 42/109 (38%), Gaps = 11/109 (10%)
Frame = +3
Query: 390 HILPNSEIKDVADLKTNNTFHELKNSRN----PVILYCHGNSNHRASPHRLKIYSVFQEL 557
H+L D T N F + +N PVILY HG S H+ S+ Q L
Sbjct: 84 HVLSPKTSPQSEDNLTLNIFTPVWTPKNETGFPVILYIHGGGFVSDSAHKYGDMSICQHL 143
Query: 558 ---NFHVVTFDYR----GYGDSTKVKPTERGVVEDLFHVYSWLLKTLDL 683
+ VVT YR G+ + + + D+ W+ + + L
Sbjct: 144 VTKDVVVVTIQYRLGFLGFWTTGDSSIPDNVALHDMVFALKWVKENIGL 192
>Z36238-8|CAH04738.1| 448|Caenorhabditis elegans Hypothetical
protein R74.8b protein.
Length = 448
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +3
Query: 213 LMFRYNKTVQRKVVFSNCINFPRNLNYDSPSSCSVTCGRNLN 338
LM R K ++V + + +P + YD S + C RNLN
Sbjct: 186 LMVRKKKFPVDELVNNEKLGYPLGVTYDEKSKYWIICDRNLN 227
>Z36238-7|CAA85278.2| 506|Caenorhabditis elegans Hypothetical
protein R74.8a protein.
Length = 506
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +3
Query: 213 LMFRYNKTVQRKVVFSNCINFPRNLNYDSPSSCSVTCGRNLN 338
LM R K ++V + + +P + YD S + C RNLN
Sbjct: 186 LMVRKKKFPVDELVNNEKLGYPLGVTYDEKSKYWIICDRNLN 227
>AC024817-2|AAU87810.1| 520|Caenorhabditis elegans Hypothetical
protein Y54G2A.38 protein.
Length = 520
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -1
Query: 418 SLISEFGSICQIPNLMRKLSTIERNSMLRFLPHVTLQ 308
S++ F SI Q+ + + LSTIERN + L +Q
Sbjct: 195 SIVCNFLSIMQLKLMKKNLSTIERNLLFSTLASSVIQ 231
>U88308-18|AAK68217.1| 198|Caenorhabditis elegans Uncoordinated
protein 11, isoform f protein.
Length = 198
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -1
Query: 238 TVLLYRNIRGSTATWNTRTPAVSEAPV-AKRSPKTM 134
T + N +G+ A WNT T AVS P A +P+ M
Sbjct: 92 TAQMSLNQQGAPAGWNTTTSAVSNNPFGATSAPQPM 127
>U88308-17|AAK68214.1| 657|Caenorhabditis elegans Uncoordinated
protein 11, isoform c protein.
Length = 657
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -1
Query: 238 TVLLYRNIRGSTATWNTRTPAVSEAPV-AKRSPKTM 134
T + N +G+ A WNT T AVS P A +P+ M
Sbjct: 551 TAQMSLNQQGAPAGWNTTTSAVSNNPFGATSAPQPM 586
>U88308-16|AAK68212.1| 586|Caenorhabditis elegans Uncoordinated
protein 11, isoform a protein.
Length = 586
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -1
Query: 238 TVLLYRNIRGSTATWNTRTPAVSEAPV-AKRSPKTM 134
T + N +G+ A WNT T AVS P A +P+ M
Sbjct: 480 TAQMSLNQQGAPAGWNTTTSAVSNNPFGATSAPQPM 515
>U88308-14|AAK68213.1| 546|Caenorhabditis elegans Uncoordinated
protein 11, isoform b protein.
Length = 546
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -1
Query: 238 TVLLYRNIRGSTATWNTRTPAVSEAPV-AKRSPKTM 134
T + N +G+ A WNT T AVS P A +P+ M
Sbjct: 440 TAQMSLNQQGAPAGWNTTTSAVSNNPFGATSAPQPM 475
>U88308-13|AAK68215.1| 534|Caenorhabditis elegans Uncoordinated
protein 11, isoform d protein.
Length = 534
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -1
Query: 238 TVLLYRNIRGSTATWNTRTPAVSEAPV-AKRSPKTM 134
T + N +G+ A WNT T AVS P A +P+ M
Sbjct: 428 TAQMSLNQQGAPAGWNTTTSAVSNNPFGATSAPQPM 463
>AF144262-1|AAD37370.1| 289|Caenorhabditis elegans AP180-like
adaptor protein protein.
Length = 289
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -1
Query: 238 TVLLYRNIRGSTATWNTRTPAVSEAPV-AKRSPKTM 134
T + N +G+ A WNT T AVS P A +P+ M
Sbjct: 183 TAQMSLNQQGAPAGWNTTTSAVSNNPFGATSAPQPM 218
>AF144259-1|AAD37367.1| 546|Caenorhabditis elegans AP180-like
adaptor protein protein.
Length = 546
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -1
Query: 238 TVLLYRNIRGSTATWNTRTPAVSEAPV-AKRSPKTM 134
T + N +G+ A WNT T AVS P A +P+ M
Sbjct: 440 TAQMSLNQQGAPAGWNTTTSAVSNNPFGATSAPQPM 475
>AF144257-1|AAD37365.1| 586|Caenorhabditis elegans AP180-like
adaptor protein protein.
Length = 586
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -1
Query: 238 TVLLYRNIRGSTATWNTRTPAVSEAPV-AKRSPKTM 134
T + N +G+ A WNT T AVS P A +P+ M
Sbjct: 480 TAQMSLNQQGAPAGWNTTTSAVSNNPFGATSAPQPM 515
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,835,536
Number of Sequences: 27780
Number of extensions: 272560
Number of successful extensions: 962
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 905
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 960
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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