Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4j22
         (755 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant r...    24   4.4  
AJ439060-6|CAD27757.1|  297|Anopheles gambiae hypothetical prote...    24   5.8  

>AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant
           receptor Or4 protein.
          Length = 397

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 257 CNLKSVLVSCSKNHHNLY 204
           CNLK + + CS  H  LY
Sbjct: 204 CNLKVMTICCSIGHCTLY 221



 Score = 23.8 bits (49), Expect = 5.8
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +2

Query: 506 WILPNGAVIAVNFQVANSTQPLKQATNEYKLNSKFY 613
           WI P  ++ A  ++  NST+P++   +   L  KFY
Sbjct: 143 WIAPIPSICAHYYRSTNSTEPVRFVQH---LEVKFY 175


>AJ439060-6|CAD27757.1|  297|Anopheles gambiae hypothetical protein
           protein.
          Length = 297

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = +2

Query: 134 LIIMQQFTLIFVVHLTALFASTACIDYDGFLNM 232
           L I+ +  L +V+ +    +   C D +GF+ M
Sbjct: 28  LSIVDEIVLSYVISILEEASQDPCFDVEGFIEM 60


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 648,722
Number of Sequences: 2352
Number of extensions: 11602
Number of successful extensions: 42
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78170964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)