Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4j18
         (712 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    27   0.44 
AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin bi...    27   0.77 
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    26   1.0  
AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    23   7.2  
AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          23   7.2  
AJ302657-1|CAC35522.1|  115|Anopheles gambiae gSG6 protein protein.    23   7.2  

>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 27.5 bits (58), Expect = 0.44
 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
 Frame = +3

Query: 387 PTFINDTVCNENQKSSNA---RTITNQLTQPKTHEKAHFSNAL 506
           P   ND+V  +NQ+   A   R +   L QP+ +E  + SN L
Sbjct: 157 PVEPNDSVALDNQRKMKALILRNVCTSLKQPELYEGQNLSNQL 199


>AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 567

 Score = 26.6 bits (56), Expect = 0.77
 Identities = 14/60 (23%), Positives = 28/60 (46%)
 Frame = +3

Query: 423 QKSSNARTITNQLTQPKTHEKAHFSNALNGSAQKNALAVVEPRQLVSRPASPTLVNDSSS 602
           QK    + +   +++  T       N L  SA KN++  + PR+ ++    PT+   S++
Sbjct: 202 QKVPAFQAMPESVSRISTGPVVQVDNKLQPSAIKNSIMSIPPRRQMTGKPGPTIATGSAT 261


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 26.2 bits (55), Expect = 1.0
 Identities = 14/60 (23%), Positives = 27/60 (45%)
 Frame = +3

Query: 423 QKSSNARTITNQLTQPKTHEKAHFSNALNGSAQKNALAVVEPRQLVSRPASPTLVNDSSS 602
           QK    + +   +++  T       N L  SA KN++  + PR+ ++    PT+    +S
Sbjct: 209 QKVPAFQAMPESVSRISTGPVVQVDNKLQPSAIKNSIMSIPPRRQMTGKPGPTIATGGAS 268


>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +1

Query: 484 RPILAMHSMVPHKKMHLLWLNQDS 555
           +PI AM+S +  KKM LL +  ++
Sbjct: 533 QPIDAMYSKIAKKKMELLKMGSEN 556


>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -3

Query: 542 NHSKCIFLCGTIECIAKMGLFMCFGLGQLIC 450
           +H+KCI +      I + G+ +  GL  +IC
Sbjct: 58  SHTKCIPISRNASAIGENGVALKKGLPHVIC 88


>AJ302657-1|CAC35522.1|  115|Anopheles gambiae gSG6 protein protein.
          Length = 115

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = +1

Query: 487 PILAMHSMVPHKKMHLLWLNQD 552
           P+L + S+VP+     +W+++D
Sbjct: 15  PLLLLESVVPYAAAEKVWVDRD 36


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 739,872
Number of Sequences: 2352
Number of extensions: 15536
Number of successful extensions: 23
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72758970
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)