Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4j18
         (712 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY551963-1|AAS65427.1|  458|Caenorhabditis elegans histone acety...    57   1e-08
AF106581-4|AAC78211.1|  458|Caenorhabditis elegans Myst family h...    57   1e-08
Z83120-2|CAB05586.1|  883|Caenorhabditis elegans Hypothetical pr...    28   5.7  
Z75537-1|CAA99834.1|  455|Caenorhabditis elegans Hypothetical pr...    28   5.7  
Z81561-1|CAB04552.2|  550|Caenorhabditis elegans Hypothetical pr...    28   7.6  
U00036-14|ABC71802.1|  672|Caenorhabditis elegans Hypothetical p...    28   7.6  
U00036-13|ABC71803.1|  479|Caenorhabditis elegans Hypothetical p...    28   7.6  

>AY551963-1|AAS65427.1|  458|Caenorhabditis elegans histone
           acetyltransferase protein.
          Length = 458

 Score = 56.8 bits (131), Expect = 1e-08
 Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
 Frame = +3

Query: 126 LVEGCRLPVRMQGGDDWPLAEIIS-IKEVQGQRGFYVHYVDFNKRLDEWVGESWLDTRKV 302
           + EGCRL V M   ++   AE+IS  +   G   FYVHY+D N+RLDEWV    L+    
Sbjct: 30  VTEGCRLLVMMASQEEERWAEVISRCRAANGSIKFYVHYIDCNRRLDEWVQSDRLNLASC 89

Query: 303 QFPRR 317
           + P++
Sbjct: 90  ELPKK 94


>AF106581-4|AAC78211.1|  458|Caenorhabditis elegans Myst family
           histone acetyltransferase-like protein 1 protein.
          Length = 458

 Score = 56.8 bits (131), Expect = 1e-08
 Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
 Frame = +3

Query: 126 LVEGCRLPVRMQGGDDWPLAEIIS-IKEVQGQRGFYVHYVDFNKRLDEWVGESWLDTRKV 302
           + EGCRL V M   ++   AE+IS  +   G   FYVHY+D N+RLDEWV    L+    
Sbjct: 30  VTEGCRLLVMMASQEEERWAEVISRCRAANGSIKFYVHYIDCNRRLDEWVQSDRLNLASC 89

Query: 303 QFPRR 317
           + P++
Sbjct: 90  ELPKK 94


>Z83120-2|CAB05586.1|  883|Caenorhabditis elegans Hypothetical
           protein R06A4.4a protein.
          Length = 883

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +1

Query: 313 DGMEQQQVVQLLQRKHSLDQEV 378
           D  E +QV+QLLQ  HS D++V
Sbjct: 6   DQHELEQVIQLLQHAHSTDRDV 27


>Z75537-1|CAA99834.1|  455|Caenorhabditis elegans Hypothetical
           protein F18E2.1 protein.
          Length = 455

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 10/33 (30%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
 Frame = +2

Query: 305 IPSTGWNSNRWYNYSKENTHW--IRRWRYAYFY 397
           +P  G N N++Y++     HW  +    Y Y+Y
Sbjct: 204 VPDNGHNDNQFYSFDLGPVHWVGVSTETYGYYY 236


>Z81561-1|CAB04552.2|  550|Caenorhabditis elegans Hypothetical
           protein K03D10.3 protein.
          Length = 550

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +3

Query: 225 FYVHYVDFNKRLDEWV 272
           +YVHY + ++R DEW+
Sbjct: 89  YYVHYEELDRRNDEWI 104


>U00036-14|ABC71802.1|  672|Caenorhabditis elegans Hypothetical
           protein R151.7a protein.
          Length = 672

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +3

Query: 117 TSSLVEGCRLPVRMQGGDDWPLAEIISIKEVQGQRGFYV 233
           TS L  G ++ +R++ GD    AE   IKEV  +  ++V
Sbjct: 199 TSGLQTGTKIEIRLKVGDSATYAEEDRIKEVINKYSYFV 237


>U00036-13|ABC71803.1|  479|Caenorhabditis elegans Hypothetical
           protein R151.7b protein.
          Length = 479

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +3

Query: 117 TSSLVEGCRLPVRMQGGDDWPLAEIISIKEVQGQRGFYV 233
           TS L  G ++ +R++ GD    AE   IKEV  +  ++V
Sbjct: 199 TSGLQTGTKIEIRLKVGDSATYAEEDRIKEVINKYSYFV 237


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,494,251
Number of Sequences: 27780
Number of extensions: 344596
Number of successful extensions: 1023
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 988
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1021
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1655655746
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)