Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4j16
         (521 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0583 - 19684388-19684498,19685083-19685216,19685765-196858...    27   6.9  
12_01_0496 + 3939731-3939758,3940459-3942773                           27   9.1  

>07_03_0583 -
           19684388-19684498,19685083-19685216,19685765-19685888,
           19685982-19686251,19686961-19687155,19687236-19687328,
           19687411-19687539,19687646-19689277
          Length = 895

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 9/32 (28%), Positives = 19/32 (59%)
 Frame = +2

Query: 188 PEVIGDAGKVFGKVLEKMFAHKKLLGVQSGIY 283
           P+++ +  +  GK   K  + ++L G+Q G+Y
Sbjct: 493 PDILNNISRALGKAKLKFSSWEELKGIQGGVY 524


>12_01_0496 + 3939731-3939758,3940459-3942773
          Length = 780

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
 Frame = -2

Query: 244 KHFFQNLPE-DFAGISY-YFWKTKTERCRSLCGCCTFCVAF 128
           K  F  +P+ DF G    Y   T    CR++C     CVAF
Sbjct: 322 KMSFVRIPQTDFWGFDMNYVMSTSLHACRAMCLASCSCVAF 362


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,454,516
Number of Sequences: 37544
Number of extensions: 209160
Number of successful extensions: 468
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 464
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 468
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)