Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte4j10
(751 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK128040-1|BAC87244.1| 245|Homo sapiens protein ( Homo sapiens ... 88 3e-17
BC139737-1|AAI39738.1| 263|Homo sapiens transmembrane protein 5... 40 0.007
AK056404-1|BAB71177.1| 263|Homo sapiens protein ( Homo sapiens ... 40 0.007
BC015232-1|AAH15232.2| 148|Homo sapiens transmembrane protein 1... 37 0.089
AY358726-1|AAQ89088.1| 246|Homo sapiens GPQH2552 protein. 31 4.4
AK129846-1|BAC85241.1| 236|Homo sapiens protein ( Homo sapiens ... 30 7.7
>AK128040-1|BAC87244.1| 245|Homo sapiens protein ( Homo sapiens
cDNA FLJ46159 fis, clone TESTI4002072. ).
Length = 245
Score = 88.2 bits (209), Expect = 3e-17
Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 2/202 (0%)
Frame = +3
Query: 138 LISFVTWSWLYLWFAR-DGNKSPEWCSRAVTLLHGSVATVVGLYQCGAEAITP-CRLTMK 311
L S W LY+ F + ++S EW R VT HG ++ + Y + P
Sbjct: 10 LCSLCGWLSLYISFCHLNKHRSYEWSCRLVTFTHGVLSIGLSAYIGFIDGPWPFTHPGSP 69
Query: 312 TTPWHYALMLWSWGYFAFDLLWCFVYWGDHYLMLVHHTSALVAVTVYTQKDYTGCTFACT 491
TP ++ + GYF FDL WC + + L+L HHT +++ + + +G
Sbjct: 70 NTPLQVHVLCLTLGYFIFDLGWCVYFQSEGALILAHHTLSILGIIMALVLGESGTEVNAV 129
Query: 492 LAFLEVTNPLLQLRWFLKSNGYAKTVLYTMVEVTYLVTFLFVRGILGTYIMMRILKSDIF 671
L E+TNPLLQ+RWFL+ G+ + +V+ ++ F VR +G ++ + S
Sbjct: 130 LFGSELTNPLLQMRWFLRETGHYHSFTGDVVDFLFVALFTGVRIGVGACLLFCEMVSPTP 189
Query: 672 DVDEKLISLVFYIVSVAFIYDI 737
K + Y VS F++ I
Sbjct: 190 KWFVKAGGVAMYAVSWCFMFSI 211
>BC139737-1|AAI39738.1| 263|Homo sapiens transmembrane protein 56
protein.
Length = 263
Score = 40.3 bits (90), Expect = 0.007
Identities = 36/146 (24%), Positives = 58/146 (39%), Gaps = 4/146 (2%)
Frame = +3
Query: 195 KSPEWCSRAVTLLHGSVATVVGLYQCGAEAITPCRLTMKTTPWHYALMLWSWGYFAFDLL 374
K EW SR V+ H V + GLY + T + + GY DL
Sbjct: 45 KKIEWNSRVVSTCHSLVVGIFGLYIFLFDEATKADPLWGGPSLANVNIAIASGYLISDLS 104
Query: 375 WCFVYW---GDHYLMLVHHTSALVAVTVYTQKDYTGCTFACTLAFLEVTNPLLQLRWFLK 545
+YW GD + ++HH ++L A + + L E+++P + RWF +
Sbjct: 105 IIILYWKVIGDKF-FIMHHCASLYAYYLVLKNGVLAYIGNFRL-LAELSSPFVNQRWFFE 162
Query: 546 SNGYAKTVLYTMVE-VTYLVTFLFVR 620
+ Y K ++ + V F VR
Sbjct: 163 ALKYPKFSKAIVINGILMTVVFFIVR 188
>AK056404-1|BAB71177.1| 263|Homo sapiens protein ( Homo sapiens
cDNA FLJ31842 fis, clone NT2RP7000259. ).
Length = 263
Score = 40.3 bits (90), Expect = 0.007
Identities = 36/146 (24%), Positives = 58/146 (39%), Gaps = 4/146 (2%)
Frame = +3
Query: 195 KSPEWCSRAVTLLHGSVATVVGLYQCGAEAITPCRLTMKTTPWHYALMLWSWGYFAFDLL 374
K EW SR V+ H V + GLY + T + + GY DL
Sbjct: 45 KKIEWNSRVVSTCHSLVVGIFGLYIFLFDEATKADPLWGGPSLANVNIAIASGYLISDLS 104
Query: 375 WCFVYW---GDHYLMLVHHTSALVAVTVYTQKDYTGCTFACTLAFLEVTNPLLQLRWFLK 545
+YW GD + ++HH ++L A + + L E+++P + RWF +
Sbjct: 105 IIILYWKVIGDKF-FIMHHCASLYAYYLVLKNGVLAYIGNFRL-LAELSSPFVNQRWFFE 162
Query: 546 SNGYAKTVLYTMVE-VTYLVTFLFVR 620
+ Y K ++ + V F VR
Sbjct: 163 ALKYPKFSKAIVINGILMTVVFFIVR 188
>BC015232-1|AAH15232.2| 148|Homo sapiens transmembrane protein 136
protein.
Length = 148
Score = 36.7 bits (81), Expect = 0.089
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 4/88 (4%)
Frame = +3
Query: 138 LISFVTWSWLYLWFAR-DGNKSPEWCSRAVTLLHGSVATVVGLYQCGAEAITP-CRLTMK 311
L S W LY+ F + ++S EW R VT HG ++ + Y + P
Sbjct: 32 LCSLCGWLSLYISFCHLNKHRSYEWSCRLVTFTHGVLSIGLSAYIGFIDGPWPFTHPGSP 91
Query: 312 TTPWHYALMLWSWGYFAFDL--LWCFVY 389
TP ++ + GYF FDL +W F +
Sbjct: 92 NTPLQVHVLCLTLGYFIFDLGCIWRFAW 119
>AY358726-1|AAQ89088.1| 246|Homo sapiens GPQH2552 protein.
Length = 246
Score = 31.1 bits (67), Expect = 4.4
Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +3
Query: 117 STASLLKLISFVTWSWLYLWFARDGNKSPEWCSRAVTLLH-GSVATVVGLYQCGAEAITP 293
+TAS + ++F W WL + K E C + + G+ VVG C + + P
Sbjct: 32 ATASRFRAVAFHNWKWLLM--RNMVCKLQEGCEETLVFIETGTARGVVGFKGCSSSSSYP 89
Query: 294 CRLTMKTTP 320
+++ +P
Sbjct: 90 AQISYLVSP 98
>AK129846-1|BAC85241.1| 236|Homo sapiens protein ( Homo sapiens
cDNA FLJ26336 fis, clone HRT02842. ).
Length = 236
Score = 30.3 bits (65), Expect = 7.7
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = +3
Query: 324 HYALMLWSWGYFAFDLLWC-FVYWGDHYLMLVH-HTSALVAVTVYTQKDYTGCTFACTLA 497
H ++ + Y + C F+Y H M +H H A + V YT+ C F CT A
Sbjct: 52 HAYAYIYVYSYTRICIHICIFIYTHMHTYMYIHIHAYAYIYVYSYTRICIHICVFICTHA 111
Query: 498 FLEV 509
++ V
Sbjct: 112 YIYV 115
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,043,262
Number of Sequences: 237096
Number of extensions: 2501458
Number of successful extensions: 9169
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8941
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9165
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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