Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4j10
         (751 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U61955-7|AAV58862.1|  456|Caenorhabditis elegans Hypothetical pr...    32   0.38 
U61955-6|AAC24408.2|  505|Caenorhabditis elegans Hypothetical pr...    32   0.38 
AL021448-2|CAA16277.2|  339|Caenorhabditis elegans Hypothetical ...    32   0.50 
AC025721-12|AAK29899.1|  278|Caenorhabditis elegans Hypothetical...    31   0.87 
U70852-3|AAK29822.1|  836|Caenorhabditis elegans Hypothetical pr...    28   6.2  
U70852-2|AAK29821.1| 1231|Caenorhabditis elegans Hypothetical pr...    28   6.2  
AF039053-7|AAC25873.3|  295|Caenorhabditis elegans Serpentine re...    28   6.2  

>U61955-7|AAV58862.1|  456|Caenorhabditis elegans Hypothetical
           protein M03D4.4b protein.
          Length = 456

 Score = 32.3 bits (70), Expect = 0.38
 Identities = 19/56 (33%), Positives = 26/56 (46%)
 Frame = +2

Query: 455 TKRLYRLHVCLHAGVFRSHQSPTATTMVFKKQWLCQNRSLHYGGGDISCDVPVCER 622
           T++L + H   H G  RSH  P      F+K  L Q+  +H GG    C  P C +
Sbjct: 78  TRQLLKKHWMWHTGE-RSHVCPHCNKAFFQKGHLTQHLMIHSGGRPHEC--PQCHK 130


>U61955-6|AAC24408.2|  505|Caenorhabditis elegans Hypothetical
           protein M03D4.4a protein.
          Length = 505

 Score = 32.3 bits (70), Expect = 0.38
 Identities = 19/56 (33%), Positives = 26/56 (46%)
 Frame = +2

Query: 455 TKRLYRLHVCLHAGVFRSHQSPTATTMVFKKQWLCQNRSLHYGGGDISCDVPVCER 622
           T++L + H   H G  RSH  P      F+K  L Q+  +H GG    C  P C +
Sbjct: 127 TRQLLKKHWMWHTGE-RSHVCPHCNKAFFQKGHLTQHLMIHSGGRPHEC--PQCHK 179


>AL021448-2|CAA16277.2|  339|Caenorhabditis elegans Hypothetical
           protein Y2H9A.2 protein.
          Length = 339

 Score = 31.9 bits (69), Expect = 0.50
 Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 5/99 (5%)
 Frame = +3

Query: 387 YWGDHYLMLVHHTSALVAVTVYTQKDYTGCTFACTLAFLEVTNPLLQLRWFLKSNGYAKT 566
           Y+  HY  L       + + +     + G TF  + A LE+  PL + +WF + N  A+T
Sbjct: 114 YYILHYSALTRLKLVKIVLLILIPSLFQGLTFWTSFAPLEIILPLAK-KWFPQYNFEAET 172

Query: 567 -VLYTMVEVTY----LVTFLFVRGILGTYIMMRILKSDI 668
            VL  +V++T+       F     I   YI + IL+  I
Sbjct: 173 GVLTGIVDITHWAATYAVFNICLPIFPIYIAIFILRQKI 211


>AC025721-12|AAK29899.1|  278|Caenorhabditis elegans Hypothetical
           protein Y48G8AL.13 protein.
          Length = 278

 Score = 31.1 bits (67), Expect = 0.87
 Identities = 36/173 (20%), Positives = 68/173 (39%), Gaps = 15/173 (8%)
 Frame = +3

Query: 195 KSPEWCSRAVTLLHGSVAT----VVGLYQCGAEAITPCRLTMKTTPWHYA----LMLWSW 350
           K PEW      L    V +    +V    C    +T      +   +H A    + L+S 
Sbjct: 28  KQPEWSDNKTRLFAVRVVSFTHALVSALGCIFSLLTDVNYVREPYDYHKANAEYVFLFSM 87

Query: 351 GYFAFDLLWCFVY--WGDHYLMLVHHTSALVAVTVYTQKDYTGCTFACTLAFL--EVTNP 518
           GYF +DLL   ++         L+HH+  + A ++      +G  F   +  L  E+   
Sbjct: 88  GYFIYDLLDMHIHGELESSKEYLIHHSLVITAFSIIL---LSGRLFGLAMIALLVEIQTV 144

Query: 519 LLQLRWFLK---SNGYAKTVLYTMVEVTYLVTFLFVRGILGTYIMMRILKSDI 668
            L LR  ++    + +    +  ++    +  FLF R +   Y++  ++  D+
Sbjct: 145 FLHLRTMVRLLYGSKHMPASIDVLINANMICLFLF-RHLPVCYLLFYLIAQDV 196


>U70852-3|AAK29822.1|  836|Caenorhabditis elegans Hypothetical
           protein F45E4.3b protein.
          Length = 836

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = +2

Query: 218 GSDP-PARKRCYSRRFISMRSRSYNAMPTYHED 313
           GS P  +R+R  SRR+   + + YN MP  H D
Sbjct: 363 GSIPRSSRERTASRRYREQQQQIYNQMPQNHND 395


>U70852-2|AAK29821.1| 1231|Caenorhabditis elegans Hypothetical
           protein F45E4.3a protein.
          Length = 1231

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = +2

Query: 218 GSDP-PARKRCYSRRFISMRSRSYNAMPTYHED 313
           GS P  +R+R  SRR+   + + YN MP  H D
Sbjct: 363 GSIPRSSRERTASRRYREQQQQIYNQMPQNHND 395


>AF039053-7|AAC25873.3|  295|Caenorhabditis elegans Serpentine
           receptor, class bc (class b-like) protein 22 protein.
          Length = 295

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 27/118 (22%), Positives = 53/118 (44%), Gaps = 1/118 (0%)
 Frame = +3

Query: 399 HYLMLVHHTSALVAVTVYTQKDYTGCTFACTLAFLEVTNPL-LQLRWFLKSNGYAKTVLY 575
           HY  L+ +++ L  +  Y   DY    F C   F+  T+ + L     L S+ Y  T   
Sbjct: 114 HYRPLISNSAILSLIIGYGLFDYLIMYFFCDFEFVIPTSCVTLTCSMNLCSSQYWATSKS 173

Query: 576 TMVEVTYLVTFLFVRGILGTYIMMRILKSDIFDVDEKLISLVFYIVSVAFIYDIVGYV 749
            ++ +T+     F   IL   ++ +++K    D++ K   L     ++ F++DI+  +
Sbjct: 174 VIIWLTF-----FFAIILSMKLLWKVIKEKNKDLN-KANRLALIDTAIIFLFDILSNI 225


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,463,878
Number of Sequences: 27780
Number of extensions: 377737
Number of successful extensions: 936
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 936
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)