Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4j03
         (746 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY505417-1|AAR90328.1|  206|Anopheles gambiae superoxide dismuta...    25   2.5  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    25   3.3  

>AY505417-1|AAR90328.1|  206|Anopheles gambiae superoxide dismutase
           1 protein.
          Length = 206

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -1

Query: 689 ELRKMEHRQHHGVETENLNA 630
           E+ ++ H++HH     NLNA
Sbjct: 53  EIMELHHQKHHNAYVTNLNA 72


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 16/50 (32%), Positives = 23/50 (46%)
 Frame = +3

Query: 564 SIRAAFLGAVFTIGLYLSTFEDGIKVFGLYTMVLSMFHFSEFMSVALTNP 713
           S R    G+ F  GLYL T +  + V G +TM+       E +S  +  P
Sbjct: 309 SARVEMFGS-FRTGLYLPTSDIDLVVIGQWTMLPLRTLEMELISQGIAEP 357


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 747,177
Number of Sequences: 2352
Number of extensions: 16417
Number of successful extensions: 21
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76923555
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)