Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte4j03
(746 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR541711-1|CAG46512.1| 284|Homo sapiens ICMT protein. 61 4e-09
CR541671-1|CAG46472.1| 284|Homo sapiens ICMT protein. 61 4e-09
BC028168-1|AAH28168.1| 284|Homo sapiens isoprenylcysteine carbo... 61 4e-09
AL031847-5|CAI19441.1| 284|Homo sapiens isoprenylcysteine carbo... 61 4e-09
AF064084-1|AAC16554.1| 284|Homo sapiens prenylcysteine carboxyl... 61 4e-09
BC017037-1|AAH17037.1| 116|Homo sapiens ICMT protein protein. 39 0.022
BC104759-1|AAI04760.1| 571|Homo sapiens ZNF181 protein protein. 32 2.5
BC043228-1|AAH43228.1| 507|Homo sapiens zinc finger protein 181... 32 2.5
>CR541711-1|CAG46512.1| 284|Homo sapiens ICMT protein.
Length = 284
Score = 61.3 bits (142), Expect = 4e-09
Identities = 31/74 (41%), Positives = 43/74 (58%)
Frame = +3
Query: 492 GPSLYFCLLNFILRYAYKGFLYEVSIRAAFLGAVFTIGLYLSTFEDGIKVFGLYTMVLSM 671
G +LY LN +L Y+ Y+++IRA FLG VF G LS + FG Y LS+
Sbjct: 43 GLALYVAGLNALLLLLYRPPRYQIAIRACFLGFVFGCGTLLSFSQSSWSHFGWYMCSLSL 102
Query: 672 FHFSEFMSVALTNP 713
FH+SE++ A+ NP
Sbjct: 103 FHYSEYLVTAVNNP 116
>CR541671-1|CAG46472.1| 284|Homo sapiens ICMT protein.
Length = 284
Score = 61.3 bits (142), Expect = 4e-09
Identities = 31/74 (41%), Positives = 43/74 (58%)
Frame = +3
Query: 492 GPSLYFCLLNFILRYAYKGFLYEVSIRAAFLGAVFTIGLYLSTFEDGIKVFGLYTMVLSM 671
G +LY LN +L Y+ Y+++IRA FLG VF G LS + FG Y LS+
Sbjct: 43 GLALYVAGLNALLLLLYRPPRYQIAIRACFLGFVFGCGTLLSFSQSSWSHFGWYMCSLSL 102
Query: 672 FHFSEFMSVALTNP 713
FH+SE++ A+ NP
Sbjct: 103 FHYSEYLVTAVNNP 116
>BC028168-1|AAH28168.1| 284|Homo sapiens isoprenylcysteine carboxyl
methyltransferase protein.
Length = 284
Score = 61.3 bits (142), Expect = 4e-09
Identities = 31/74 (41%), Positives = 43/74 (58%)
Frame = +3
Query: 492 GPSLYFCLLNFILRYAYKGFLYEVSIRAAFLGAVFTIGLYLSTFEDGIKVFGLYTMVLSM 671
G +LY LN +L Y+ Y+++IRA FLG VF G LS + FG Y LS+
Sbjct: 43 GLALYVAGLNALLLLLYRPPRYQIAIRACFLGFVFGCGTLLSFSQSSWSHFGWYMCSLSL 102
Query: 672 FHFSEFMSVALTNP 713
FH+SE++ A+ NP
Sbjct: 103 FHYSEYLVTAVNNP 116
>AL031847-5|CAI19441.1| 284|Homo sapiens isoprenylcysteine carboxyl
methyltransferase protein.
Length = 284
Score = 61.3 bits (142), Expect = 4e-09
Identities = 31/74 (41%), Positives = 43/74 (58%)
Frame = +3
Query: 492 GPSLYFCLLNFILRYAYKGFLYEVSIRAAFLGAVFTIGLYLSTFEDGIKVFGLYTMVLSM 671
G +LY LN +L Y+ Y+++IRA FLG VF G LS + FG Y LS+
Sbjct: 43 GLALYVAGLNALLLLLYRPPRYQIAIRACFLGFVFGCGTLLSFSQSSWSHFGWYMCSLSL 102
Query: 672 FHFSEFMSVALTNP 713
FH+SE++ A+ NP
Sbjct: 103 FHYSEYLVTAVNNP 116
>AF064084-1|AAC16554.1| 284|Homo sapiens prenylcysteine carboxyl
methyltransferase protein.
Length = 284
Score = 61.3 bits (142), Expect = 4e-09
Identities = 31/74 (41%), Positives = 43/74 (58%)
Frame = +3
Query: 492 GPSLYFCLLNFILRYAYKGFLYEVSIRAAFLGAVFTIGLYLSTFEDGIKVFGLYTMVLSM 671
G +LY LN +L Y+ Y+++IRA FLG VF G LS + FG Y LS+
Sbjct: 43 GLALYVAGLNALLLLLYRPPRYQIAIRACFLGFVFGCGTLLSFSQSSWSHFGWYMCSLSL 102
Query: 672 FHFSEFMSVALTNP 713
FH+SE++ A+ NP
Sbjct: 103 FHYSEYLVTAVNNP 116
>BC017037-1|AAH17037.1| 116|Homo sapiens ICMT protein protein.
Length = 116
Score = 38.7 bits (86), Expect = 0.022
Identities = 25/74 (33%), Positives = 35/74 (47%)
Frame = +3
Query: 492 GPSLYFCLLNFILRYAYKGFLYEVSIRAAFLGAVFTIGLYLSTFEDGIKVFGLYTMVLSM 671
G +LY LN +L Y+ Y+++IRA FLG VF G LS + FG +V
Sbjct: 43 GLALYVAGLNALLLLLYRPPRYQIAIRACFLGFVFGCGTLLSFSQSSWSHFGWSHLVHPH 102
Query: 672 FHFSEFMSVALTNP 713
H F ++ P
Sbjct: 103 SHCRIFPYTMISVP 116
>BC104759-1|AAI04760.1| 571|Homo sapiens ZNF181 protein protein.
Length = 571
Score = 31.9 bits (69), Expect = 2.5
Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 4/106 (3%)
Frame = -2
Query: 625 SNVDK*RPIVNTAPRNAARIDTSYKNPL*AYLKIKFNKQKYNEGPQ*VSAQIS----DVN 458
S VD RP + T+ R + D+ YK + + F+ + PQ +SA+ + D+
Sbjct: 133 SQVDHFRPAILTS-RESPTADSVYKYNI---FRSTFHSKSTLSEPQKISAEGNSHKYDIL 188
Query: 457 PKRLPEKNDMKNIQTVSINHIIACFPAGHMFFIVKTSIIKDACSRE 320
K LP+K+ +KN + ++ +G F K+ + C+RE
Sbjct: 189 KKNLPKKSVIKNEKVNGGKKLLNSNKSGAAFSQGKSLTLPQTCNRE 234
>BC043228-1|AAH43228.1| 507|Homo sapiens zinc finger protein 181
protein.
Length = 507
Score = 31.9 bits (69), Expect = 2.5
Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 4/106 (3%)
Frame = -2
Query: 625 SNVDK*RPIVNTAPRNAARIDTSYKNPL*AYLKIKFNKQKYNEGPQ*VSAQIS----DVN 458
S VD RP + T+ R + D+ YK + + F+ + PQ +SA+ + D+
Sbjct: 69 SQVDHFRPAILTS-RESPTADSVYKYNI---FRSTFHSKSTLSEPQKISAEGNSHKYDIL 124
Query: 457 PKRLPEKNDMKNIQTVSINHIIACFPAGHMFFIVKTSIIKDACSRE 320
K LP+K+ +KN + ++ +G F K+ + C+RE
Sbjct: 125 KKNLPKKSVIKNEKVNGGKKLLNSNKSGAAFSQGKSLTLPQTCNRE 170
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,360,099
Number of Sequences: 237096
Number of extensions: 1998395
Number of successful extensions: 2539
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2453
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2539
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8959138240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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