Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte4i19
(339 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC70.02c |||mitochondrial ATPase inhibitor |Schizosaccharomyce... 28 0.34
SPAC27F1.09c |prp10|sap155|U2 snRNP-associated protein Sap155|Sc... 25 2.4
SPAC1002.04c |taf11||transcription factor TFIID complex subunit ... 25 2.4
SPAC23H3.15c ||SPAC25H1.01c|sequence orphan|Schizosaccharomyces ... 25 2.4
SPAC25G10.08 |||translation initiation factor eIF3b |Schizosacch... 24 5.5
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 24 5.5
SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein Ucp7|Schizosaccha... 24 5.5
SPAC4G8.12c |||alpha-1,2-mannosyltransferase |Schizosaccharomyce... 24 7.3
SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 24 7.3
SPCC4B3.10c |ipk1||inositol 1,3,4,5,6-pentakisphosphate |Schizos... 24 7.3
SPAC644.12 |cdc5||cell division control protein Cdc5|Schizosacch... 24 7.3
SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces pomb... 23 9.6
SPBC14C8.14c |pol5||DNA polymerase phi|Schizosaccharomyces pombe... 23 9.6
SPCC126.14 |prp18||U5 snRNP-associated protein Prp18|Schizosacch... 23 9.6
SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces po... 23 9.6
SPAC222.14c |||GTP binding protein Sey1 |Schizosaccharomyces pom... 23 9.6
SPCC4F11.04c |||mannosyltransferase complex subunit |Schizosacch... 23 9.6
>SPCC70.02c |||mitochondrial ATPase inhibitor |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 90
Score = 28.3 bits (60), Expect = 0.34
Identities = 13/41 (31%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = +3
Query: 144 AQEDSYFYDKQKEQLEKIRKKLKLN-PEISQKEDK*AEKLR 263
A+ED + + + EQL K+++ LKL+ E+ + E + +K++
Sbjct: 47 AKEDFFVHQHEIEQLRKLKESLKLHREELDELESRVDKKMK 87
>SPAC27F1.09c |prp10|sap155|U2 snRNP-associated protein
Sap155|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1188
Score = 25.4 bits (53), Expect = 2.4
Identities = 13/47 (27%), Positives = 20/47 (42%)
Frame = +1
Query: 67 DLEQERAEAAVDLSGNPAEASANTEQPKKIVTFTTNRRSNWKKSERN 207
D ++E ++S P + + P TT RRS W K+ N
Sbjct: 198 DKKRELELNNTEISQKPKRSRWDQAPPSVTQVSTTKRRSRWDKAPEN 244
>SPAC1002.04c |taf11||transcription factor TFIID complex subunit
Taf11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 199
Score = 25.4 bits (53), Expect = 2.4
Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 3/39 (7%)
Frame = +1
Query: 100 DLSGNP---AEASANTEQPKKIVTFTTNRRSNWKKSERN 207
D S +P A A ANT P ++ + NW + E N
Sbjct: 20 DQSNSPTAGAHAKANTASPAAEPAPSSKEKENWNRQEEN 58
>SPAC23H3.15c ||SPAC25H1.01c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 325
Score = 25.4 bits (53), Expect = 2.4
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +3
Query: 168 DKQKEQLEKIRKKLKLNPEISQK 236
DK K +EK+ KL +PE+ QK
Sbjct: 290 DKMKGNMEKMAGKLTRDPELVQK 312
>SPAC25G10.08 |||translation initiation factor eIF3b
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 725
Score = 24.2 bits (50), Expect = 5.5
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +3
Query: 177 KEQLEKIRKKLKLNPEISQKED 242
KE ++KIRKKLK + +ED
Sbjct: 632 KEDMKKIRKKLKDYNRLFDEED 653
>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex
subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 24.2 bits (50), Expect = 5.5
Identities = 12/38 (31%), Positives = 25/38 (65%)
Frame = +3
Query: 168 DKQKEQLEKIRKKLKLNPEISQKEDK*AEKLRQKHTKI 281
+K+++Q E+ KKL+ +I+ K+ K EKL ++ ++
Sbjct: 101 EKERQQREQ-EKKLREQEKIAAKKMKELEKLEKERIRL 137
Score = 24.2 bits (50), Expect = 5.5
Identities = 12/34 (35%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Frame = +3
Query: 171 KQKEQLEKIRK-KLKLNPEISQKEDK*AEKLRQK 269
K+ ++LEK+ K +++L + +KE++ +KLR+K
Sbjct: 122 KKMKELEKLEKERIRLQEQQRRKEER-DQKLREK 154
>SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein
Ucp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 697
Score = 24.2 bits (50), Expect = 5.5
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +1
Query: 46 QLRLVYQDLEQERAEAAVDLSGNPAEASANTEQPKKIVTFTTNRRSNWKKSER 204
Q+ +Y D + R EAA+ + + + T+QPK T N + KSER
Sbjct: 531 QISKLYID-GKHRCEAAISSHSSESHSKRTTQQPKS----TPNHTNIKVKSER 578
>SPAC4G8.12c |||alpha-1,2-mannosyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 23.8 bits (49), Expect = 7.3
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 4/35 (11%)
Frame = -1
Query: 291 EICLFLCVFVSIS---QLICLLSGI-FQGSVSISF 199
+I L LC+FVS+S L C+L F G I+F
Sbjct: 215 DIFLHLCIFVSVSFATVLACILEDYKFYGVFVITF 249
>SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 557
Score = 23.8 bits (49), Expect = 7.3
Identities = 8/25 (32%), Positives = 17/25 (68%)
Frame = +3
Query: 168 DKQKEQLEKIRKKLKLNPEISQKED 242
+++KE +E+I ++ NPE+ +D
Sbjct: 29 EREKEAVERIVQEENQNPEVPSNDD 53
>SPCC4B3.10c |ipk1||inositol 1,3,4,5,6-pentakisphosphate
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 640
Score = 23.8 bits (49), Expect = 7.3
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +3
Query: 168 DKQKEQLEKIRKKLKLNPEISQKEDK 245
DK+ ++LEKI+K+L + E+ E K
Sbjct: 136 DKKVKELEKIQKELLVVYELPDPETK 161
>SPAC644.12 |cdc5||cell division control protein
Cdc5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 757
Score = 23.8 bits (49), Expect = 7.3
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +1
Query: 31 CVEGLQLRLVYQDLEQERAEAAVDLSGNPAEASANTEQPKKIVTF 165
C+E Q L DLE + E +SG AEA+A P + F
Sbjct: 94 CLERYQKLL--DDLEAKENEQLGLISGEGAEAAAPVNDPNSRLRF 136
>SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 952
Score = 23.4 bits (48), Expect = 9.6
Identities = 12/41 (29%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +3
Query: 156 SYFYDKQKEQLEKIRKKLKLNPEISQKEDK*AEKLRQK-HT 275
S F ++ + +++RK K+N E+ + +E+LR++ HT
Sbjct: 904 SVFQEQLMRETKRVRKLEKVNSELKLHCFELSERLREREHT 944
>SPBC14C8.14c |pol5||DNA polymerase phi|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 959
Score = 23.4 bits (48), Expect = 9.6
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = +3
Query: 144 AQEDSYFYDKQKEQLEKIRKKLKLNPEI 227
+ ED Y Y K K+ K K NP +
Sbjct: 329 SDEDRYLYRAAKRVTSKLEKVSKQNPTL 356
>SPCC126.14 |prp18||U5 snRNP-associated protein
Prp18|Schizosaccharomyces pombe|chr 3|||Manual
Length = 343
Score = 23.4 bits (48), Expect = 9.6
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +3
Query: 147 QEDSYFYDKQKEQLEKIRKKLKLNPEISQKEDK 245
+E Y +KQ++ ++ KK KL E + E+K
Sbjct: 36 REKKYLQEKQQKDEQRELKKRKLEEERLKYEEK 68
>SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 851
Score = 23.4 bits (48), Expect = 9.6
Identities = 9/32 (28%), Positives = 21/32 (65%)
Frame = +3
Query: 168 DKQKEQLEKIRKKLKLNPEISQKEDK*AEKLR 263
D+ +EQ K + K+K +P+ + +++ +KL+
Sbjct: 196 DQAREQGSKAKDKIKNDPDAQKAKEETKQKLQ 227
Score = 23.4 bits (48), Expect = 9.6
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +1
Query: 64 QDLEQERAEAAVDLSGNP 117
QDL +E AVDL G+P
Sbjct: 227 QDLYEEFKSVAVDLQGDP 244
>SPAC222.14c |||GTP binding protein Sey1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 762
Score = 23.4 bits (48), Expect = 9.6
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +1
Query: 61 YQDLEQERAEAAVDLSGNPAEASANTEQPK 150
YQ+ Q+RA + SG+P ++ + E K
Sbjct: 729 YQEQVQQRAMQRTEKSGSPVASADDAEAEK 758
>SPCC4F11.04c |||mannosyltransferase complex subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 345
Score = 23.4 bits (48), Expect = 9.6
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -2
Query: 335 FFDIKPFNLLKAYVLKY 285
+FD PFN+ +A V++Y
Sbjct: 137 YFDAYPFNVQRADVIRY 153
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,124,713
Number of Sequences: 5004
Number of extensions: 16607
Number of successful extensions: 81
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 81
length of database: 2,362,478
effective HSP length: 64
effective length of database: 2,042,222
effective search space used: 98026656
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -