Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4i15
         (734 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              25   0.74 
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    24   1.7  
AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective...    23   3.9  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   5.2  
AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc fi...    22   6.9  

>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 25.0 bits (52), Expect = 0.74
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -2

Query: 610 IHRFQNLLTLQTSICYSKPAHNQRRCGDMN 521
           I  FQN + +  SIC +K   N++   D+N
Sbjct: 19  IKDFQNAIRMGQSICMAKTGINKQIINDVN 48


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 11/21 (52%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
 Frame = +1

Query: 493 CAYCEFVLCDSCLHTC-AGCE 552
           C  C+F  CD C  TC AGC+
Sbjct: 747 CHCCDFDACD-CEMTCPAGCK 766


>AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective
           protein-1 protein.
          Length = 128

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
 Frame = +1

Query: 469 CGVTSETKCAYCEFVLC---DSCLHTCAGCEQVYCNKCLFVGSEGSE 600
           CG+    +CA     LC    + L  CA   Q  CNKC+   +E  E
Sbjct: 56  CGIV---QCAKGPDELCGGPQNYLGICAEGMQCSCNKCIGCSAEKFE 99


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +1

Query: 562 CNKCLFVGSEGSEICV 609
           C+KC    S G E+C+
Sbjct: 150 CDKCSTYQSNGEEVCL 165


>AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc
           finger domain-Z2 isoform protein.
          Length = 71

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +1

Query: 532 HTCAGCEQVYCNK 570
           + C  CE+VYC++
Sbjct: 36  YRCVICERVYCSR 48


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,033
Number of Sequences: 438
Number of extensions: 4454
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22901220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)