Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte4i14
(640 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF063009-2|AAO21399.1| 438|Caenorhabditis elegans Innexin prote... 62 3e-10
AF063009-1|AAM45360.1| 454|Caenorhabditis elegans Innexin prote... 62 3e-10
AF067607-11|AAM81119.1| 412|Caenorhabditis elegans Innexin prot... 55 5e-08
AF067607-10|AAM81118.1| 436|Caenorhabditis elegans Innexin prot... 55 5e-08
U64859-3|AAC69093.2| 447|Caenorhabditis elegans Innexin protein... 54 1e-07
Z50755-1|CAB61030.2| 386|Caenorhabditis elegans Hypothetical pr... 52 3e-07
U93195-1|AAB51534.1| 386|Caenorhabditis elegans UNC-9 protein. 52 3e-07
Z70685-1|CAA94607.1| 522|Caenorhabditis elegans Hypothetical pr... 52 5e-07
Z19122-1|CAA79529.1| 522|Caenorhabditis elegans hypothetical po... 52 5e-07
U41746-5|AAT81186.1| 492|Caenorhabditis elegans Innexin protein... 51 6e-07
U41746-4|AAA83332.1| 559|Caenorhabditis elegans Innexin protein... 51 6e-07
U59211-1|AAB09670.1| 420|Caenorhabditis elegans embryonic membr... 51 8e-07
U53343-3|AAA96220.2| 420|Caenorhabditis elegans Innexin protein... 51 8e-07
AF067219-7|AAC17026.2| 372|Caenorhabditis elegans Innexin prote... 50 1e-06
AF040656-3|AAB95049.1| 385|Caenorhabditis elegans Innexin prote... 49 2e-06
U59212-1|AAB09671.1| 428|Caenorhabditis elegans transmembrane p... 49 3e-06
U39677-5|AAN71843.1| 383|Caenorhabditis elegans Innexin protein... 49 3e-06
U39677-4|AAN71842.1| 428|Caenorhabditis elegans Innexin protein... 49 3e-06
Z66561-7|CAB54206.2| 419|Caenorhabditis elegans Hypothetical pr... 47 1e-05
AF304127-1|AAG50240.1| 419|Caenorhabditis elegans innexin protein. 47 1e-05
U41558-3|AAK39244.1| 556|Caenorhabditis elegans Innexin protein... 46 3e-05
Z83240-3|CAB05813.2| 483|Caenorhabditis elegans Hypothetical pr... 45 4e-05
Z69658-2|CAB60997.1| 389|Caenorhabditis elegans Hypothetical pr... 44 1e-04
U59213-1|AAB09672.1| 363|Caenorhabditis elegans transmembrane p... 44 1e-04
Z75552-3|CAA99940.1| 465|Caenorhabditis elegans Hypothetical pr... 43 2e-04
AF303262-1|AAG50220.1| 362|Caenorhabditis elegans gap junction ... 43 2e-04
AF067219-9|AAX88822.1| 266|Caenorhabditis elegans Innexin prote... 43 2e-04
AF067219-8|AAC17025.1| 362|Caenorhabditis elegans Innexin prote... 43 2e-04
AC024791-35|AAF60675.2| 462|Caenorhabditis elegans Innexin prot... 43 2e-04
U97404-1|AAB93310.1| 408|Caenorhabditis elegans Innexin protein... 40 0.001
AF068716-8|AAC17749.1| 554|Caenorhabditis elegans Innexin prote... 40 0.002
Z71259-7|CAA95793.1| 423|Caenorhabditis elegans Hypothetical pr... 39 0.003
U59210-1|AAB09669.1| 423|Caenorhabditis elegans EAT-5 protein. 39 0.003
AF067219-6|AAC17030.1| 382|Caenorhabditis elegans Innexin prote... 35 0.043
Z72506-2|CAA96621.1| 434|Caenorhabditis elegans Hypothetical pr... 31 0.70
Z72506-1|CAA96618.1| 432|Caenorhabditis elegans Hypothetical pr... 31 0.70
U66261-1|AAB07022.1| 1525|Caenorhabditis elegans multidrug resis... 29 2.1
U41554-4|AAA83299.2| 1525|Caenorhabditis elegans Multidrug resis... 29 2.1
Z96047-3|CAB09412.1| 207|Caenorhabditis elegans Hypothetical pr... 28 4.9
AF039041-1|AAP46271.1| 1067|Caenorhabditis elegans Laminin relat... 28 4.9
>AF063009-2|AAO21399.1| 438|Caenorhabditis elegans Innexin protein
19, isoform b protein.
Length = 438
Score = 62.1 bits (144), Expect = 3e-10
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
Frame = +1
Query: 331 DNAVFRLHNVFTTVLLLTCSMIITASQYVGKPIMCIVN----GIPANVVNTFCWITSTFT 498
D+AV RL+ +T ++L C ++I+A QY G PI C VN + ++CWI +T+
Sbjct: 21 DDAVDRLNYYYTPLILAVCCLVISAKQYGGTPIECWVNPHSRESMEEYIESYCWIQNTYW 80
Query: 499 MPDAFAREVGKEVAHPGVGPEFEGTEKKYYTYYQWVCFVLFFQAIM 636
+P + V + E+K YYQWV F+L +A+M
Sbjct: 81 IP-----------MYENVPDDHTAREEKQIGYYQWVPFILIAEALM 115
>AF063009-1|AAM45360.1| 454|Caenorhabditis elegans Innexin protein
19, isoform a protein.
Length = 454
Score = 62.1 bits (144), Expect = 3e-10
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
Frame = +1
Query: 331 DNAVFRLHNVFTTVLLLTCSMIITASQYVGKPIMCIVN----GIPANVVNTFCWITSTFT 498
D+AV RL+ +T ++L C ++I+A QY G PI C VN + ++CWI +T+
Sbjct: 37 DDAVDRLNYYYTPLILAVCCLVISAKQYGGTPIECWVNPHSRESMEEYIESYCWIQNTYW 96
Query: 499 MPDAFAREVGKEVAHPGVGPEFEGTEKKYYTYYQWVCFVLFFQAIM 636
+P + V + E+K YYQWV F+L +A+M
Sbjct: 97 IP-----------MYENVPDDHTAREEKQIGYYQWVPFILIAEALM 131
>AF067607-11|AAM81119.1| 412|Caenorhabditis elegans Innexin protein
18, isoform b protein.
Length = 412
Score = 54.8 bits (126), Expect = 5e-08
Identities = 38/127 (29%), Positives = 60/127 (47%), Gaps = 4/127 (3%)
Frame = +1
Query: 265 RIKMFQLLGGLRVYFQYQPIRTDNAVFRLHNVFTTVLLLTCSMIITASQYVGKPIMCIV- 441
RI M L LR +P D+ V RLH ++T+ ++L +++++A QYVG PI C V
Sbjct: 6 RIGMHFLASALRFL---EPRVDDDFVDRLHYLYTSTMVLMFAVLVSAKQYVGHPIECFVP 62
Query: 442 ---NGIPANVVNTFCWITSTFTMPDAFAREVGKEVAHPGVGPEFEGTEKKYYTYYQWVCF 612
+CW+ +T+ +P + H + E++ YYQWV F
Sbjct: 63 AQFTRAMEQYTENYCWVQNTYWVP------FQDLIPH-----RLDDRERRQIGYYQWVPF 111
Query: 613 VLFFQAI 633
VL A+
Sbjct: 112 VLAVAAL 118
>AF067607-10|AAM81118.1| 436|Caenorhabditis elegans Innexin protein
18, isoform a protein.
Length = 436
Score = 54.8 bits (126), Expect = 5e-08
Identities = 38/127 (29%), Positives = 60/127 (47%), Gaps = 4/127 (3%)
Frame = +1
Query: 265 RIKMFQLLGGLRVYFQYQPIRTDNAVFRLHNVFTTVLLLTCSMIITASQYVGKPIMCIV- 441
RI M L LR +P D+ V RLH ++T+ ++L +++++A QYVG PI C V
Sbjct: 6 RIGMHFLASALRFL---EPRVDDDFVDRLHYLYTSTMVLMFAVLVSAKQYVGHPIECFVP 62
Query: 442 ---NGIPANVVNTFCWITSTFTMPDAFAREVGKEVAHPGVGPEFEGTEKKYYTYYQWVCF 612
+CW+ +T+ +P + H + E++ YYQWV F
Sbjct: 63 AQFTRAMEQYTENYCWVQNTYWVP------FQDLIPH-----RLDDRERRQIGYYQWVPF 111
Query: 613 VLFFQAI 633
VL A+
Sbjct: 112 VLAVAAL 118
>U64859-3|AAC69093.2| 447|Caenorhabditis elegans Innexin protein 5
protein.
Length = 447
Score = 53.6 bits (123), Expect = 1e-07
Identities = 33/96 (34%), Positives = 47/96 (48%), Gaps = 4/96 (4%)
Frame = +1
Query: 361 FTTVLLLTCSMIITASQYVGKPIMCIV----NGIPANVVNTFCWITSTFTMPDAFAREVG 528
+T+ LL ++++ ASQYVG+PI C V T+C+I T+ +P AFA E
Sbjct: 29 YTSTLLGFSAIMMAASQYVGRPIQCWVPAQFTRTWEKYAETYCFIKGTYFLPGAFASEGE 88
Query: 529 KEVAHPGVGPEFEGTEKKYYTYYQWVCFVLFFQAIM 636
V P+ T YYQW+ VL QA +
Sbjct: 89 MSV----TSPDDAVTATPQVGYYQWIPIVLVLQAFL 120
>Z50755-1|CAB61030.2| 386|Caenorhabditis elegans Hypothetical
protein R12H7.1 protein.
Length = 386
Score = 52.0 bits (119), Expect = 3e-07
Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 4/106 (3%)
Frame = +1
Query: 331 DNAVFRLHNVFTTVLLLTCSMIITASQYVGKPIMCIVNGI----PANVVNTFCWITSTFT 498
D+ + +L+ +TT ++ +++++A QYVG PI C V +CW+ +T+
Sbjct: 21 DDIIDKLNYYYTTAIITVFAILVSAKQYVGFPIQCWVPATFTEPMEQYTENYCWVQNTYF 80
Query: 499 MPDAFAREVGKEVAHPGVGPEFEGTEKKYYTYYQWVCFVLFFQAIM 636
+P H + + E + YYQWV FVL +A++
Sbjct: 81 LP-----------LHDYIPHNYAERENRQIGYYQWVPFVLALEALL 115
>U93195-1|AAB51534.1| 386|Caenorhabditis elegans UNC-9 protein.
Length = 386
Score = 52.0 bits (119), Expect = 3e-07
Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 4/106 (3%)
Frame = +1
Query: 331 DNAVFRLHNVFTTVLLLTCSMIITASQYVGKPIMCIVNGI----PANVVNTFCWITSTFT 498
D+ + +L+ +TT ++ +++++A QYVG PI C V +CW+ +T+
Sbjct: 21 DDIIDKLNYYYTTAIITVFAILVSAKQYVGFPIQCWVPATFTEPMEQYTENYCWVQNTYF 80
Query: 499 MPDAFAREVGKEVAHPGVGPEFEGTEKKYYTYYQWVCFVLFFQAIM 636
+P H + + E + YYQWV FVL +A++
Sbjct: 81 LP-----------LHDYIPHNYAERENRQIGYYQWVPFVLALEALL 115
>Z70685-1|CAA94607.1| 522|Caenorhabditis elegans Hypothetical
protein R07D5.1 protein.
Length = 522
Score = 51.6 bits (118), Expect = 5e-07
Identities = 29/110 (26%), Positives = 56/110 (50%), Gaps = 4/110 (3%)
Frame = +1
Query: 319 PIRTDNAVFRLHNVFTTVLLLTCSMIITASQYVGKPIMCIVNGIPANVV----NTFCWIT 486
P D+ V +L+ +TT +L + +++++A QYVG PI C V + + +CW+
Sbjct: 135 PRLDDDFVDKLNYYYTTTILASFALLVSAKQYVGFPIQCWVPATFTDAMEQYTENYCWVQ 194
Query: 487 STFTMPDAFAREVGKEVAHPGVGPEFEGTEKKYYTYYQWVCFVLFFQAIM 636
+T+ +P ++ +E+ + YYQWV F+L +A++
Sbjct: 195 NTYWVP--MQEDIPREI---------YSRRNRQIGYYQWVPFILAIEALL 233
>Z19122-1|CAA79529.1| 522|Caenorhabditis elegans hypothetical
polypeptide protein.
Length = 522
Score = 51.6 bits (118), Expect = 5e-07
Identities = 29/110 (26%), Positives = 56/110 (50%), Gaps = 4/110 (3%)
Frame = +1
Query: 319 PIRTDNAVFRLHNVFTTVLLLTCSMIITASQYVGKPIMCIVNGIPANVV----NTFCWIT 486
P D+ V +L+ +TT +L + +++++A QYVG PI C V + + +CW+
Sbjct: 135 PRLDDDFVDKLNYYYTTTILASFALLVSAKQYVGFPIQCWVPATFTDAMEQYTENYCWVQ 194
Query: 487 STFTMPDAFAREVGKEVAHPGVGPEFEGTEKKYYTYYQWVCFVLFFQAIM 636
+T+ +P ++ +E+ + YYQWV F+L +A++
Sbjct: 195 NTYWVP--MQEDIPREI---------YSRRNRQIGYYQWVPFILAIEALL 233
>U41746-5|AAT81186.1| 492|Caenorhabditis elegans Innexin protein
10, isoform b protein.
Length = 492
Score = 51.2 bits (117), Expect = 6e-07
Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 4/101 (3%)
Frame = +1
Query: 340 VFRLHNVFTTVLLLTCSMIITASQYVGKPIMCIVNGIPAN----VVNTFCWITSTFTMPD 507
V RLH+ FT LL+ +++++ Q+ GKP+ C+V I ++ +CW + T+ +P
Sbjct: 22 VDRLHSYFTCNLLIGLAVLVSFKQFGGKPVECLVPDIFSSSWEQYAENYCWASDTYYVP- 80
Query: 508 AFAREVGKEVAHPGVGPEFEGTEKKYYTYYQWVCFVLFFQA 630
P G + + ++ +YYQWV F L +A
Sbjct: 81 ---------TNEPVAGLQSDEKRQRKISYYQWVPFFLLLEA 112
>U41746-4|AAA83332.1| 559|Caenorhabditis elegans Innexin protein
10, isoform a protein.
Length = 559
Score = 51.2 bits (117), Expect = 6e-07
Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 4/101 (3%)
Frame = +1
Query: 340 VFRLHNVFTTVLLLTCSMIITASQYVGKPIMCIVNGIPAN----VVNTFCWITSTFTMPD 507
V RLH+ FT LL+ +++++ Q+ GKP+ C+V I ++ +CW + T+ +P
Sbjct: 22 VDRLHSYFTCNLLIGLAVLVSFKQFGGKPVECLVPDIFSSSWEQYAENYCWASDTYYVP- 80
Query: 508 AFAREVGKEVAHPGVGPEFEGTEKKYYTYYQWVCFVLFFQA 630
P G + + ++ +YYQWV F L +A
Sbjct: 81 ---------TNEPVAGLQSDEKRQRKISYYQWVPFFLLLEA 112
>U59211-1|AAB09670.1| 420|Caenorhabditis elegans embryonic membrane
protein protein.
Length = 420
Score = 50.8 bits (116), Expect = 8e-07
Identities = 38/112 (33%), Positives = 54/112 (48%), Gaps = 4/112 (3%)
Frame = +1
Query: 313 YQPIRTDNAVFRLHNVFTTVLLLTCSMIITASQYVGKPIMCIV----NGIPANVVNTFCW 480
++P D+AV RL V T LL S++++ QYVG I C + G +C+
Sbjct: 15 FKPKTFDDAVDRLSYVTTATLLAFFSIMVSCKQYVGSAIQCWMPMEFKGGWEQYAEDYCF 74
Query: 481 ITSTFTMPDAFAREVGKEVAHPGVGPEFEGTEKKYYTYYQWVCFVLFFQAIM 636
I +TF +P+ E+ PG + E +K YYQWV VL QA M
Sbjct: 75 IQNTFFIPER------SEI--PG---DVEDRQKAEIGYYQWVPIVLAIQAFM 115
>U53343-3|AAA96220.2| 420|Caenorhabditis elegans Innexin protein 3
protein.
Length = 420
Score = 50.8 bits (116), Expect = 8e-07
Identities = 38/112 (33%), Positives = 54/112 (48%), Gaps = 4/112 (3%)
Frame = +1
Query: 313 YQPIRTDNAVFRLHNVFTTVLLLTCSMIITASQYVGKPIMCIV----NGIPANVVNTFCW 480
++P D+AV RL V T LL S++++ QYVG I C + G +C+
Sbjct: 15 FKPKTFDDAVDRLSYVTTATLLAFFSIMVSCKQYVGSAIQCWMPMEFKGGWEQYAEDYCF 74
Query: 481 ITSTFTMPDAFAREVGKEVAHPGVGPEFEGTEKKYYTYYQWVCFVLFFQAIM 636
I +TF +P+ E+ PG + E +K YYQWV VL QA M
Sbjct: 75 IQNTFFIPER------SEI--PG---DVEDRQKAEIGYYQWVPIVLAIQAFM 115
>AF067219-7|AAC17026.2| 372|Caenorhabditis elegans Innexin protein
16 protein.
Length = 372
Score = 50.0 bits (114), Expect = 1e-06
Identities = 36/124 (29%), Positives = 61/124 (49%), Gaps = 7/124 (5%)
Frame = +1
Query: 283 LLGGLRVYFQYQPIRTDN---AVFRLHNVFTTVLLLTCSMIITASQYVGKPIMCIVNGIP 453
+LG ++ Y Q +DN ++ RL+ V TT +L+ S+++ A YVG+P+ C
Sbjct: 3 MLGNIKTYAQTVTSLSDNDDTSIDRLNYVVTTSILIAFSLLLFAKNYVGEPMQCWTPNQF 62
Query: 454 A----NVVNTFCWITSTFTMPDAFAREVGKEVAHPGVGPEFEGTEKKYYTYYQWVCFVLF 621
A + ++C+I +T+ +P + P E E + YYQWV F+L
Sbjct: 63 AGGWESFAESYCFIENTYFVPMQDSNL-----------PAAETREGREMIYYQWVPFLLV 111
Query: 622 FQAI 633
QA+
Sbjct: 112 IQAL 115
>AF040656-3|AAB95049.1| 385|Caenorhabditis elegans Innexin protein
13 protein.
Length = 385
Score = 49.2 bits (112), Expect = 2e-06
Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 5/107 (4%)
Frame = +1
Query: 331 DNAVFRLHNVFTTVLLLTCSMIITASQYVGKPIMCIV----NGIPANVVNTFCWITST-F 495
D+++ RL+ +T +LL+ ++ ++A QYVG+PI C + G +C++ +T F
Sbjct: 17 DDSIDRLNYYWTPMLLVIFALTLSAKQYVGQPIQCWIPAQFTGAWEQYSENYCFVQNTYF 76
Query: 496 TMPDAFAREVGKEVAHPGVGPEFEGTEKKYYTYYQWVCFVLFFQAIM 636
PD + P + EG E YYQWV F+L QAI+
Sbjct: 77 ISPDKYI---------PDSEIDREGAE---IGYYQWVPFILGLQAIL 111
>U59212-1|AAB09671.1| 428|Caenorhabditis elegans transmembrane
protein protein.
Length = 428
Score = 48.8 bits (111), Expect = 3e-06
Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 6/107 (5%)
Frame = +1
Query: 331 DNAVFRLHNVFTTVLLLTCSMIITASQYVGKPIMCIV----NGIPANVVNTFCWITSTFT 498
D+ V +L+ +T+ ++ ++I++A QYVG PI C V +CW+ +T+
Sbjct: 19 DDFVDKLNYHYTSAIIFAFAIIVSAKQYVGYPIQCWVPAQFTDAWEQYTENYCWVENTYY 78
Query: 499 MP--DAFAREVGKEVAHPGVGPEFEGTEKKYYTYYQWVCFVLFFQAI 633
+P AF E G A + +YYQWV FVL +A+
Sbjct: 79 LPLTSAFPLEYGDRRA-------------RQISYYQWVPFVLALEAL 112
>U39677-5|AAN71843.1| 383|Caenorhabditis elegans Innexin protein 1,
isoform b protein.
Length = 383
Score = 48.8 bits (111), Expect = 3e-06
Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 6/107 (5%)
Frame = +1
Query: 331 DNAVFRLHNVFTTVLLLTCSMIITASQYVGKPIMCIV----NGIPANVVNTFCWITSTFT 498
D+ V +L+ +T+ ++ ++I++A QYVG PI C V +CW+ +T+
Sbjct: 19 DDFVDKLNYHYTSAIIFAFAIIVSAKQYVGYPIQCWVPAQFTDAWEQYTENYCWVENTYY 78
Query: 499 MP--DAFAREVGKEVAHPGVGPEFEGTEKKYYTYYQWVCFVLFFQAI 633
+P AF E G A + +YYQWV FVL +A+
Sbjct: 79 LPLTSAFPLEYGDRRA-------------RQISYYQWVPFVLALEAL 112
>U39677-4|AAN71842.1| 428|Caenorhabditis elegans Innexin protein 1,
isoform a protein.
Length = 428
Score = 48.8 bits (111), Expect = 3e-06
Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 6/107 (5%)
Frame = +1
Query: 331 DNAVFRLHNVFTTVLLLTCSMIITASQYVGKPIMCIV----NGIPANVVNTFCWITSTFT 498
D+ V +L+ +T+ ++ ++I++A QYVG PI C V +CW+ +T+
Sbjct: 19 DDFVDKLNYHYTSAIIFAFAIIVSAKQYVGYPIQCWVPAQFTDAWEQYTENYCWVENTYY 78
Query: 499 MP--DAFAREVGKEVAHPGVGPEFEGTEKKYYTYYQWVCFVLFFQAI 633
+P AF E G A + +YYQWV FVL +A+
Sbjct: 79 LPLTSAFPLEYGDRRA-------------RQISYYQWVPFVLALEAL 112
>Z66561-7|CAB54206.2| 419|Caenorhabditis elegans Hypothetical
protein F08G12.10 protein.
Length = 419
Score = 46.8 bits (106), Expect = 1e-05
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 4/123 (3%)
Frame = +1
Query: 280 QLLGGLRVYFQYQPIRTDNAVFRLHNVFTTVLLLTCSMIITASQYVGKPIMCIV----NG 447
QL+G LR + Q + + R++ FT +L+ ++ I+ QY G+PI C +G
Sbjct: 11 QLVGMLR---KQQGQLAFDTIDRVNAWFTPFVLVAMTLAISCKQYFGQPIKCWTPREFSG 67
Query: 448 IPANVVNTFCWITSTFTMPDAFAREVGKEVAHPGVGPEFEGTEKKYYTYYQWVCFVLFFQ 627
V+ FC+I +T+ +P+ G EV E ++ YY+WV VL FQ
Sbjct: 68 SWDGYVHDFCFIENTYFVPN------GTEVTD-------EARGGRHINYYRWVPLVLLFQ 114
Query: 628 AIM 636
A M
Sbjct: 115 AAM 117
>AF304127-1|AAG50240.1| 419|Caenorhabditis elegans innexin protein.
Length = 419
Score = 46.8 bits (106), Expect = 1e-05
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 4/123 (3%)
Frame = +1
Query: 280 QLLGGLRVYFQYQPIRTDNAVFRLHNVFTTVLLLTCSMIITASQYVGKPIMCIV----NG 447
QL+G LR + Q + + R++ FT +L+ ++ I+ QY G+PI C +G
Sbjct: 11 QLVGMLR---KQQGQLAFDTIDRVNAWFTPFVLVAMTLAISCKQYFGQPIKCWTPREFSG 67
Query: 448 IPANVVNTFCWITSTFTMPDAFAREVGKEVAHPGVGPEFEGTEKKYYTYYQWVCFVLFFQ 627
V+ FC+I +T+ +P+ G EV E ++ YY+WV VL FQ
Sbjct: 68 SWDGYVHDFCFIENTYFVPN------GTEVTD-------EARGGRHINYYRWVPLVLLFQ 114
Query: 628 AIM 636
A M
Sbjct: 115 AAM 117
>U41558-3|AAK39244.1| 556|Caenorhabditis elegans Innexin protein 7
protein.
Length = 556
Score = 45.6 bits (103), Expect = 3e-05
Identities = 32/114 (28%), Positives = 52/114 (45%), Gaps = 17/114 (14%)
Frame = +1
Query: 340 VFRLHNVFTTVLLLTCSMIITASQYVGKPIMCIV----NGIPANVVNTFCWITSTFTMPD 507
V +H+ T+ LL+ +++I+ Q+ G PI C+V N +CW T+ +P
Sbjct: 22 VASIHSFLTSNLLVGLAVLISWKQFGGTPIECMVPLDFTSAWVQYSNNYCWAQPTYFIP- 80
Query: 508 AFAREVGKEVAHP-------------GVGPEFEGTEKKYYTYYQWVCFVLFFQA 630
F E+ ++V P G P F + +YYQW+ F L F+A
Sbjct: 81 -FTEELVEQVVDPADVVADGITIGNGGNRPRFVKKGGEKISYYQWMSFFLLFEA 133
>Z83240-3|CAB05813.2| 483|Caenorhabditis elegans Hypothetical
protein T23H4.1 protein.
Length = 483
Score = 45.2 bits (102), Expect = 4e-05
Identities = 32/105 (30%), Positives = 47/105 (44%)
Frame = +1
Query: 316 QPIRTDNAVFRLHNVFTTVLLLTCSMIITASQYVGKPIMCIVNGIPANVVNTFCWITSTF 495
QP D+ RLH +TT LL +++I+ + G+PI C +PA ++ W +
Sbjct: 40 QPQADDDIFDRLHYYYTTTFLLLTAVLISLKMFGGRPIEC---WLPAEYKSS--W--EDY 92
Query: 496 TMPDAFAREVGKEVAHPGVGPEFEGTEKKYYTYYQWVCFVLFFQA 630
T +AR PE E +YYQWV F L + A
Sbjct: 93 TEMYCWARNTYVTAFEDDNLPEVVNREYTMVSYYQWVPFFLVYVA 137
>Z69658-2|CAB60997.1| 389|Caenorhabditis elegans Hypothetical
protein C36H8.2 protein.
Length = 389
Score = 43.6 bits (98), Expect = 1e-04
Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 4/101 (3%)
Frame = +1
Query: 346 RLHNVFTTVLLLTCSMIITASQYVGKPIMCIV----NGIPANVVNTFCWITSTFTMPDAF 513
RL++ T V+L S ++ +S ++G PI C N N VN +C++ T+ +P
Sbjct: 29 RLNSRVTVVILAVSSALLLSSHFIGDPITCWTPAQFNAQWVNFVNQYCFVHGTYFVP--- 85
Query: 514 AREVGKEVAHPGVGPEFEGTEKKYYTYYQWVCFVLFFQAIM 636
+ +++A E E K YYQWV +V QA +
Sbjct: 86 ---LDQQLAF-----EEEERTKVSIQYYQWVPYVFALQAFL 118
>U59213-1|AAB09672.1| 363|Caenorhabditis elegans transmembrane
protein protein.
Length = 363
Score = 43.6 bits (98), Expect = 1e-04
Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 4/101 (3%)
Frame = +1
Query: 346 RLHNVFTTVLLLTCSMIITASQYVGKPIMCIV----NGIPANVVNTFCWITSTFTMPDAF 513
RL++ T V+L S ++ +S ++G PI C N N VN +C++ T+ +P
Sbjct: 3 RLNSRVTVVILAVSSALLLSSHFIGDPITCWTPAQFNAQWVNFVNQYCFVHGTYFVP--- 59
Query: 514 AREVGKEVAHPGVGPEFEGTEKKYYTYYQWVCFVLFFQAIM 636
+ +++A E E K YYQWV +V QA +
Sbjct: 60 ---LDQQLAF-----EEEERTKVSIQYYQWVPYVFALQAFL 92
>Z75552-3|CAA99940.1| 465|Caenorhabditis elegans Hypothetical
protein W04D2.3 protein.
Length = 465
Score = 43.2 bits (97), Expect = 2e-04
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 5/124 (4%)
Frame = +1
Query: 274 MFQLLGGLRVYFQYQPIRTDNAVFRLHNVFTTVLLLTCSMIITASQYVGKPIMCIV-NGI 450
M + G+ Y P D+ RL+ + T +LL S++I+ Q+ G+PI C+ N
Sbjct: 3 MIETFLGMAKYLS--PREDDDWSDRLNYLMTPNILLAFSVLISFKQFGGRPIECMFPNKF 60
Query: 451 PAN---VVNTFCWITST-FTMPDAFAREVGKEVAHPGVGPEFEGTEKKYYTYYQWVCFVL 618
P + +CW T F P + KE + T + +YYQWV F L
Sbjct: 61 PGSWEQYAENYCWSQDTYFVEPTQDVSLLKKEERY---------TPDRQLSYYQWVPFFL 111
Query: 619 FFQA 630
QA
Sbjct: 112 LLQA 115
>AF303262-1|AAG50220.1| 362|Caenorhabditis elegans gap junction
innexin protein.
Length = 362
Score = 43.2 bits (97), Expect = 2e-04
Identities = 32/110 (29%), Positives = 47/110 (42%), Gaps = 4/110 (3%)
Frame = +1
Query: 319 PIRTDNAVFRLHNVFTTVLLLTCSMIITASQYVGKPIMCIV----NGIPANVVNTFCWIT 486
P +A+ RL FT LL + + I A QYVG+ I C G ++C I
Sbjct: 14 PTYDSDAIDRLRYYFTVFLLTSSAFFIMAKQYVGQSIQCWAPKQFKGGWEEYAESYCLIE 73
Query: 487 STFTMPDAFAREVGKEVAHPGVGPEFEGTEKKYYTYYQWVCFVLFFQAIM 636
+T+ + + P + E K YYQWV F+LF A++
Sbjct: 74 NTY-----YVHMNNSNLPGPAI------RENKELKYYQWVPFILFGLAVV 112
>AF067219-9|AAX88822.1| 266|Caenorhabditis elegans Innexin protein
17, isoform b protein.
Length = 266
Score = 43.2 bits (97), Expect = 2e-04
Identities = 32/110 (29%), Positives = 47/110 (42%), Gaps = 4/110 (3%)
Frame = +1
Query: 319 PIRTDNAVFRLHNVFTTVLLLTCSMIITASQYVGKPIMCIV----NGIPANVVNTFCWIT 486
P +A+ RL FT LL + + I A QYVG+ I C G ++C I
Sbjct: 14 PTYDSDAIDRLRYYFTVFLLTSSAFFIMAKQYVGQSIQCWAPKQFKGGWEEYAESYCLIE 73
Query: 487 STFTMPDAFAREVGKEVAHPGVGPEFEGTEKKYYTYYQWVCFVLFFQAIM 636
+T+ + + P + E K YYQWV F+LF A++
Sbjct: 74 NTY-----YVHMNNSNLPGPAI------RENKELKYYQWVPFILFGLAVV 112
>AF067219-8|AAC17025.1| 362|Caenorhabditis elegans Innexin protein
17, isoform a protein.
Length = 362
Score = 43.2 bits (97), Expect = 2e-04
Identities = 32/110 (29%), Positives = 47/110 (42%), Gaps = 4/110 (3%)
Frame = +1
Query: 319 PIRTDNAVFRLHNVFTTVLLLTCSMIITASQYVGKPIMCIV----NGIPANVVNTFCWIT 486
P +A+ RL FT LL + + I A QYVG+ I C G ++C I
Sbjct: 14 PTYDSDAIDRLRYYFTVFLLTSSAFFIMAKQYVGQSIQCWAPKQFKGGWEEYAESYCLIE 73
Query: 487 STFTMPDAFAREVGKEVAHPGVGPEFEGTEKKYYTYYQWVCFVLFFQAIM 636
+T+ + + P + E K YYQWV F+LF A++
Sbjct: 74 NTY-----YVHMNNSNLPGPAI------RENKELKYYQWVPFILFGLAVV 112
>AC024791-35|AAF60675.2| 462|Caenorhabditis elegans Innexin protein
22 protein.
Length = 462
Score = 42.7 bits (96), Expect = 2e-04
Identities = 25/107 (23%), Positives = 46/107 (42%), Gaps = 4/107 (3%)
Frame = +1
Query: 331 DNAVFRLHNVFTTVLLLTCSMIITASQYVGKPIMCIV----NGIPANVVNTFCWITSTFT 498
DN R+ + T +L+ +++++ G+PI C++ AN + FC+
Sbjct: 20 DNGAERIVHTTTIQILICFGFLVSSNMMFGQPITCLMLPETPDSSANYFHDFCFYQDKLR 79
Query: 499 MPDAFAREVGKEVAHPGVGPEFEGTEKKYYTYYQWVCFVLFFQAIMC 639
+P V + + ++ TYYQW F++F Q MC
Sbjct: 80 IPPLH-NAVKRSTRQGTMNINNIMPQEVAVTYYQWTPFIIFLQVAMC 125
>U97404-1|AAB93310.1| 408|Caenorhabditis elegans Innexin protein 12
protein.
Length = 408
Score = 40.3 bits (90), Expect = 0.001
Identities = 31/106 (29%), Positives = 45/106 (42%), Gaps = 7/106 (6%)
Frame = +1
Query: 340 VFRLHNVFTTVLLLTCSMIITASQYVGKPIMC----IVNGIPANVVNTFCWITSTFTMP- 504
V +L+ TT+ L+ S IT +VG PI C G A +C++ +TF +P
Sbjct: 20 VDKLNYCATTIGLVLASAFITGWSFVGSPIDCWFPAYYKGWWAEYALDYCYVQNTFFVPF 79
Query: 505 --DAFAREVGKEVAHPGVGPEFEGTEKKYYTYYQWVCFVLFFQAIM 636
D R E + YYQWV F+L QA++
Sbjct: 80 SEDKAERSYNWEQLVADKQNTTSLKQTNQIGYYQWVPFILALQAML 125
>AF068716-8|AAC17749.1| 554|Caenorhabditis elegans Innexin protein
4 protein.
Length = 554
Score = 39.9 bits (89), Expect = 0.002
Identities = 26/108 (24%), Positives = 53/108 (49%), Gaps = 4/108 (3%)
Frame = +1
Query: 325 RTDNAVFRLHNVFTTVLLLTCSMIITASQYVGKPIMCIVNG-IPAN---VVNTFCWITST 492
+ D+ V RL +T+ L+ +++++ Q+ G+P+ C V A+ +CW +T
Sbjct: 54 KDDDFVDRLSYFYTSSFLIMMAVLVSFKQFGGRPLECWVPAQFTASWEAYTEMYCWAQNT 113
Query: 493 FTMPDAFAREVGKEVAHPGVGPEFEGTEKKYYTYYQWVCFVLFFQAIM 636
+ +P +++ +++ E + +YYQWV F L QA +
Sbjct: 114 YWVP--IDQDIPVDISE---------REYRQISYYQWVPFFLLLQAFL 150
>Z71259-7|CAA95793.1| 423|Caenorhabditis elegans Hypothetical
protein F13G3.8 protein.
Length = 423
Score = 39.1 bits (87), Expect = 0.003
Identities = 28/110 (25%), Positives = 47/110 (42%)
Frame = +1
Query: 301 VYFQYQPIRTDNAVFRLHNVFTTVLLLTCSMIITASQYVGKPIMCIVNGIPANVVNTFCW 480
++ +P D RL+ ++T++++ S+ ITA QYVG P+ C +PA T W
Sbjct: 7 MFSMVKPRLDDLGTDRLNYYYSTLIIMGMSLTITARQYVGSPLQC---WVPAQF--TKAW 61
Query: 481 ITSTFTMPDAFAREVGKEVAHPGVGPEFEGTEKKYYTYYQWVCFVLFFQA 630
+ F + V E + YYQW F++ +A
Sbjct: 62 --EQYAEDYCFVYNTYWVKPNDKVPLTVEERVSQQLIYYQWAPFIMAIEA 109
>U59210-1|AAB09669.1| 423|Caenorhabditis elegans EAT-5 protein.
Length = 423
Score = 39.1 bits (87), Expect = 0.003
Identities = 28/110 (25%), Positives = 47/110 (42%)
Frame = +1
Query: 301 VYFQYQPIRTDNAVFRLHNVFTTVLLLTCSMIITASQYVGKPIMCIVNGIPANVVNTFCW 480
++ +P D RL+ ++T++++ S+ ITA QYVG P+ C +PA T W
Sbjct: 7 MFSMVKPRLDDLGTDRLNYYYSTLIIMGMSLTITARQYVGSPLQC---WVPAQF--TKAW 61
Query: 481 ITSTFTMPDAFAREVGKEVAHPGVGPEFEGTEKKYYTYYQWVCFVLFFQA 630
+ F + V E + YYQW F++ +A
Sbjct: 62 --EQYAEDYCFVYNTYWVKPNDKVPLTVEERVSQQLIYYQWAPFIMAIEA 109
>AF067219-6|AAC17030.1| 382|Caenorhabditis elegans Innexin protein
15 protein.
Length = 382
Score = 35.1 bits (77), Expect = 0.043
Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 4/106 (3%)
Frame = +1
Query: 331 DNAVFRLHNVFTTVLLLTCSMIITASQYVGKPIMCIV----NGIPANVVNTFCWITSTFT 498
D+ + RL+ ++ + +++I Y G+ I C G +C I +T+
Sbjct: 18 DDFIDRLNFQYSAYVFALSALVIGYHTYFGRAISCWTPAEFKGGWNEYTTDYCLIENTYY 77
Query: 499 MPDAFAREVGKEVAHPGVGPEFEGTEKKYYTYYQWVCFVLFFQAIM 636
+P + P + PE E+K +YYQWV F+L F A +
Sbjct: 78 VP----------LEDPNMPPE-RYREEKELSYYQWVQFILVFLAFL 112
>Z72506-2|CAA96621.1| 434|Caenorhabditis elegans Hypothetical
protein F07A5.1b protein.
Length = 434
Score = 31.1 bits (67), Expect = 0.70
Identities = 27/94 (28%), Positives = 40/94 (42%)
Frame = +1
Query: 346 RLHNVFTTVLLLTCSMIITASQYVGKPIMCIVNGIPANVVNTFCWITSTFTMPDAFAREV 525
RLH +FT LL ++ A Q+ G PI C++ ++ + +I + F +V
Sbjct: 27 RLH-LFTVYLLGFFVLLTGAKQHFGNPIDCMLPKQHDDLKSWRDYIHNFCLFYGTFRYDV 85
Query: 526 GKEVAHPGVGPEFEGTEKKYYTYYQWVCFVLFFQ 627
+ G TE YYQWV F FQ
Sbjct: 86 SNGTSEFG-----SYTEDASVNYYQWVPFFFAFQ 114
>Z72506-1|CAA96618.1| 432|Caenorhabditis elegans Hypothetical
protein F07A5.1a protein.
Length = 432
Score = 31.1 bits (67), Expect = 0.70
Identities = 27/94 (28%), Positives = 40/94 (42%)
Frame = +1
Query: 346 RLHNVFTTVLLLTCSMIITASQYVGKPIMCIVNGIPANVVNTFCWITSTFTMPDAFAREV 525
RLH +FT LL ++ A Q+ G PI C++ ++ + +I + F +V
Sbjct: 27 RLH-LFTVYLLGFFVLLTGAKQHFGNPIDCMLPKQHDDLKSWRDYIHNFCLFYGTFRYDV 85
Query: 526 GKEVAHPGVGPEFEGTEKKYYTYYQWVCFVLFFQ 627
+ G TE YYQWV F FQ
Sbjct: 86 SNGTSEFG-----SYTEDASVNYYQWVPFFFAFQ 114
>U66261-1|AAB07022.1| 1525|Caenorhabditis elegans multidrug
resistance related protein2 protein.
Length = 1525
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = -2
Query: 372 HRCEHIVQSEHGIVSPYRLVLEIHPQST**LKHLDSFIYLSTGIFSCFGMYSKL 211
H E+++ S G ++ VL H + LKH D I L G S G Y +L
Sbjct: 775 HIFENVISSSTGCLASKTRVLVTHGLTY--LKHCDQLIVLKEGTISELGTYQEL 826
>U41554-4|AAA83299.2| 1525|Caenorhabditis elegans Multidrug
resistance protein familyprotein 2 protein.
Length = 1525
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = -2
Query: 372 HRCEHIVQSEHGIVSPYRLVLEIHPQST**LKHLDSFIYLSTGIFSCFGMYSKL 211
H E+++ S G ++ VL H + LKH D I L G S G Y +L
Sbjct: 775 HIFENVISSSTGCLASKTRVLVTHGLTY--LKHCDQLIVLKEGTISELGTYQEL 826
>Z96047-3|CAB09412.1| 207|Caenorhabditis elegans Hypothetical
protein DY3.3 protein.
Length = 207
Score = 28.3 bits (60), Expect = 4.9
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = -3
Query: 434 HIIGFPTYCDAVIIIEHVSN 375
HI+ T+C +II++H+SN
Sbjct: 181 HILKICTFCSCIIILQHLSN 200
>AF039041-1|AAP46271.1| 1067|Caenorhabditis elegans Laminin related.
see also lmb-protein 1 protein.
Length = 1067
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -2
Query: 156 LLEIVEITFNFVSLHTQNKDIINL*FNIDCKTTKYIRTAVVQ 31
LL+I + FNF LHT D+++ ID K I VV+
Sbjct: 231 LLKITNLRFNFTKLHTLGDDLLDYRPEIDEKYYYAIYEIVVR 272
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,185,085
Number of Sequences: 27780
Number of extensions: 325828
Number of successful extensions: 935
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 866
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 893
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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