Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4i12
         (757 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC044240-1|AAH44240.1|  502|Homo sapiens immunoglobulin-like dom...    31   5.9  
AY672838-1|AAT77413.1|  514|Homo sapiens immunoglobulin-like dom...    31   5.9  
AY672837-1|AAT77412.1|  546|Homo sapiens immunoglobulin-like dom...    31   5.9  
AY134857-1|AAN10256.1|  265|Homo sapiens unknown protein.              31   5.9  
AK022138-1|BAB13968.1|  258|Homo sapiens protein ( Homo sapiens ...    30   7.8  

>BC044240-1|AAH44240.1|  502|Homo sapiens immunoglobulin-like domain
           containing receptor 1 protein.
          Length = 502

 Score = 30.7 bits (66), Expect = 5.9
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = -3

Query: 179 PVYSCCRSRSPCRLAHCRC 123
           P Y CC  R PC  AHC C
Sbjct: 194 PQYCCCYIRCPCCPAHCCC 212


>AY672838-1|AAT77413.1|  514|Homo sapiens immunoglobulin-like
           domain-containing receptor 1 alpha' protein.
          Length = 514

 Score = 30.7 bits (66), Expect = 5.9
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = -3

Query: 179 PVYSCCRSRSPCRLAHCRC 123
           P Y CC  R PC  AHC C
Sbjct: 206 PQYCCCYIRCPCCPAHCCC 224


>AY672837-1|AAT77412.1|  546|Homo sapiens immunoglobulin-like
           domain-containing receptor 1 alpha protein.
          Length = 546

 Score = 30.7 bits (66), Expect = 5.9
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = -3

Query: 179 PVYSCCRSRSPCRLAHCRC 123
           P Y CC  R PC  AHC C
Sbjct: 194 PQYCCCYIRCPCCPAHCCC 212


>AY134857-1|AAN10256.1|  265|Homo sapiens unknown protein.
          Length = 265

 Score = 30.7 bits (66), Expect = 5.9
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = -3

Query: 179 PVYSCCRSRSPCRLAHCRC 123
           P Y CC  R PC  AHC C
Sbjct: 194 PQYCCCYIRCPCCPAHCCC 212


>AK022138-1|BAB13968.1|  258|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12076 fis, clone HEMBB1002442, weakly similar to
           LIN-10 PROTEIN. ).
          Length = 258

 Score = 30.3 bits (65), Expect = 7.8
 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
 Frame = -3

Query: 188 RSVPVYSCCRSRSPCRL---AHCRC-FPRTFHSSHPPTPYSS 75
           R+ P   CC+S  P RL   +H RC     F S  PPT Y+S
Sbjct: 156 RNKPQGRCCQSLLPARLVYVSHFRCQSTMLFSSPPPPTVYNS 197


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,762,048
Number of Sequences: 237096
Number of extensions: 2027279
Number of successful extensions: 4428
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4422
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9127122082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)