Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte4i11
(752 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC068479-1|AAH68479.1| 689|Homo sapiens hypothetical protein FL... 60 1e-08
AK074981-1|BAC11331.1| 486|Homo sapiens protein ( Homo sapiens ... 60 1e-08
AK000261-1|BAA91038.1| 431|Homo sapiens protein ( Homo sapiens ... 60 1e-08
AC013472-3|AAY14654.1| 431|Homo sapiens unknown protein. 60 1e-08
BC056871-1|AAH56871.1| 933|Homo sapiens phospholipase D2 protein. 31 5.9
BC015033-1|AAH15033.1| 933|Homo sapiens phospholipase D2 protein. 31 5.9
AM261745-1|CAK12620.1| 362|Homo sapiens MHC class I antigen pro... 31 5.9
AF038441-1|AAB96656.1| 922|Homo sapiens phospholipase D2 protein. 31 5.9
AF038440-1|AAB96655.1| 933|Homo sapiens phospholipase D2 protein. 31 5.9
AF035483-1|AAC24498.1| 933|Homo sapiens phospholipase D2 protein. 31 5.9
AF033850-1|AAD04197.1| 933|Homo sapiens phospholipase D2 protein. 31 5.9
AY178289-1|AAO21120.1| 630|Homo sapiens phospholipase D2 protein. 30 7.8
>BC068479-1|AAH68479.1| 689|Homo sapiens hypothetical protein
FLJ20254 protein.
Length = 689
Score = 59.7 bits (138), Expect = 1e-08
Identities = 32/88 (36%), Positives = 47/88 (53%)
Frame = +1
Query: 130 RNPWLWASFVLLVSIAGLVAYDVSRAGGNFPKSTTGKLFKDLGILEHSQQAWQKTLSTSA 309
R PW +LLV G + +D+ R+ +F S TG+L + G L SQQA K S S
Sbjct: 479 RLPWTRLLLLLLVFAVGFLCHDL-RSHSSFQASLTGRLLRSSGFLPASQQACAKLYSYSL 537
Query: 310 RGYLWLETNAPVYYAQTVEICRPYTQLS 393
+GY WL P++ + + + RP QL+
Sbjct: 538 QGYSWLGETLPLWGSHLLTVVRPSLQLA 565
>AK074981-1|BAC11331.1| 486|Homo sapiens protein ( Homo sapiens
cDNA FLJ90500 fis, clone NT2RP3004025. ).
Length = 486
Score = 59.7 bits (138), Expect = 1e-08
Identities = 32/88 (36%), Positives = 47/88 (53%)
Frame = +1
Query: 130 RNPWLWASFVLLVSIAGLVAYDVSRAGGNFPKSTTGKLFKDLGILEHSQQAWQKTLSTSA 309
R PW +LLV G + +D+ R+ +F S TG+L + G L SQQA K S S
Sbjct: 276 RLPWTRLLLLLLVFAVGFLCHDL-RSHSSFQASLTGRLLRSSGFLPASQQACAKLYSYSL 334
Query: 310 RGYLWLETNAPVYYAQTVEICRPYTQLS 393
+GY WL P++ + + + RP QL+
Sbjct: 335 QGYSWLGETLPLWGSHLLTVVRPSLQLA 362
>AK000261-1|BAA91038.1| 431|Homo sapiens protein ( Homo sapiens
cDNA FLJ20254 fis, clone COLF6926. ).
Length = 431
Score = 59.7 bits (138), Expect = 1e-08
Identities = 32/88 (36%), Positives = 47/88 (53%)
Frame = +1
Query: 130 RNPWLWASFVLLVSIAGLVAYDVSRAGGNFPKSTTGKLFKDLGILEHSQQAWQKTLSTSA 309
R PW +LLV G + +D+ R+ +F S TG+L + G L SQQA K S S
Sbjct: 221 RLPWTRLLLLLLVFAVGFLCHDL-RSHSSFQASLTGRLLRSSGFLPASQQACAKLYSYSL 279
Query: 310 RGYLWLETNAPVYYAQTVEICRPYTQLS 393
+GY WL P++ + + + RP QL+
Sbjct: 280 QGYSWLGETLPLWGSHLLTVVRPSLQLA 307
>AC013472-3|AAY14654.1| 431|Homo sapiens unknown protein.
Length = 431
Score = 59.7 bits (138), Expect = 1e-08
Identities = 32/88 (36%), Positives = 47/88 (53%)
Frame = +1
Query: 130 RNPWLWASFVLLVSIAGLVAYDVSRAGGNFPKSTTGKLFKDLGILEHSQQAWQKTLSTSA 309
R PW +LLV G + +D+ R+ +F S TG+L + G L SQQA K S S
Sbjct: 221 RLPWTRLLLLLLVFAVGFLCHDL-RSHSSFQASLTGRLLRSSGFLPASQQACAKLYSYSL 279
Query: 310 RGYLWLETNAPVYYAQTVEICRPYTQLS 393
+GY WL P++ + + + RP QL+
Sbjct: 280 QGYSWLGETLPLWGSHLLTVVRPSLQLA 307
>BC056871-1|AAH56871.1| 933|Homo sapiens phospholipase D2 protein.
Length = 933
Score = 30.7 bits (66), Expect = 5.9
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +1
Query: 49 FKFPCSEIATYRKY*FKDILDRMTSTRRNPWLWASFVLLVSIAGLVAYDVSRAGGN 216
F CS+ T +I+DR+ + W + +VLL + G D+S GGN
Sbjct: 643 FFISCSDGRTVLNKVGDEIVDRILKAHKQGWCYRVYVLLPLLPGFEG-DISTGGGN 697
>BC015033-1|AAH15033.1| 933|Homo sapiens phospholipase D2 protein.
Length = 933
Score = 30.7 bits (66), Expect = 5.9
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +1
Query: 49 FKFPCSEIATYRKY*FKDILDRMTSTRRNPWLWASFVLLVSIAGLVAYDVSRAGGN 216
F CS+ T +I+DR+ + W + +VLL + G D+S GGN
Sbjct: 643 FFISCSDGRTVLNKVGDEIVDRILKAHKQGWCYRVYVLLPLLPGFEG-DISTGGGN 697
>AM261745-1|CAK12620.1| 362|Homo sapiens MHC class I antigen
protein.
Length = 362
Score = 30.7 bits (66), Expect = 5.9
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1
Query: 322 WLETNAPVYYAQTVEICRPYTQLSKDAFFIALK 420
W+E P Y+ + +IC+ TQ ++ IAL+
Sbjct: 75 WIEQEGPEYWDRNTQICKTNTQTDRENLRIALR 107
>AF038441-1|AAB96656.1| 922|Homo sapiens phospholipase D2 protein.
Length = 922
Score = 30.7 bits (66), Expect = 5.9
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +1
Query: 49 FKFPCSEIATYRKY*FKDILDRMTSTRRNPWLWASFVLLVSIAGLVAYDVSRAGGN 216
F CS+ T +I+DR+ + W + +VLL + G D+S GGN
Sbjct: 643 FFISCSDGRTVLNKVGDEIVDRILKAHKQGWCYRVYVLLPLLPGFEG-DISTGGGN 697
>AF038440-1|AAB96655.1| 933|Homo sapiens phospholipase D2 protein.
Length = 933
Score = 30.7 bits (66), Expect = 5.9
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +1
Query: 49 FKFPCSEIATYRKY*FKDILDRMTSTRRNPWLWASFVLLVSIAGLVAYDVSRAGGN 216
F CS+ T +I+DR+ + W + +VLL + G D+S GGN
Sbjct: 643 FFISCSDGRTVLNKVGDEIVDRILKAHKQGWCYRVYVLLPLLPGFEG-DISTGGGN 697
>AF035483-1|AAC24498.1| 933|Homo sapiens phospholipase D2 protein.
Length = 933
Score = 30.7 bits (66), Expect = 5.9
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +1
Query: 49 FKFPCSEIATYRKY*FKDILDRMTSTRRNPWLWASFVLLVSIAGLVAYDVSRAGGN 216
F CS+ T +I+DR+ + W + +VLL + G D+S GGN
Sbjct: 643 FFISCSDGRTVLNKVGDEIVDRILKAHKQGWCYRVYVLLPLLPGFEG-DISTGGGN 697
>AF033850-1|AAD04197.1| 933|Homo sapiens phospholipase D2 protein.
Length = 933
Score = 30.7 bits (66), Expect = 5.9
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +1
Query: 49 FKFPCSEIATYRKY*FKDILDRMTSTRRNPWLWASFVLLVSIAGLVAYDVSRAGGN 216
F CS+ T +I+DR+ + W + +VLL + G D+S GGN
Sbjct: 643 FFISCSDGRTVLNKVGDEIVDRILKAHKQGWCYRVYVLLPLLPGFEG-DISTGGGN 697
>AY178289-1|AAO21120.1| 630|Homo sapiens phospholipase D2 protein.
Length = 630
Score = 30.3 bits (65), Expect = 7.8
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +1
Query: 49 FKFPCSEIATYRKY*FKDILDRMTSTRRNPWLWASFVLLVSIAGLVAYDVSRAGGN 216
F CS+ T +I+DR+ + W + +VLL + G D+S GGN
Sbjct: 340 FFISCSDGRTVLNKVGDEIVDRILKAHKQGWSYRVYVLLPLLPGFEG-DISTGGGN 394
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,343,108
Number of Sequences: 237096
Number of extensions: 2517033
Number of successful extensions: 6788
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 6592
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6788
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9071127468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -