Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte4i11
(752 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83113-1|CAB05543.1| 733|Caenorhabditis elegans Hypothetical pr... 36 0.031
AF016513-1|AAB69446.1| 733|Caenorhabditis elegans Ce-LEA protein. 36 0.031
AL021466-1|CAA16282.1| 308|Caenorhabditis elegans Hypothetical ... 31 1.2
AF068718-3|AAO21430.1| 82|Caenorhabditis elegans Cystatin-like... 31 1.2
Z81113-2|CAB03279.1| 510|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z93391-9|CAB07683.2| 392|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z81498-4|CAL63995.1| 392|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z70783-1|CAA94852.2| 765|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z22181-5|CAA80183.1| 619|Caenorhabditis elegans Hypothetical pr... 28 6.2
U80452-13|AAB37850.1| 139|Caenorhabditis elegans Hypothetical p... 28 8.2
AC024801-9|AAF59653.3| 791|Caenorhabditis elegans Hypothetical ... 28 8.2
>Z83113-1|CAB05543.1| 733|Caenorhabditis elegans Hypothetical
protein K08H10.1 protein.
Length = 733
Score = 35.9 bits (79), Expect = 0.031
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 1/102 (0%)
Frame = +1
Query: 391 SKDAFFIALKKAGILYGNVQDYVVEKTPVVIKTIEEYAPGLVDNVQSYASTAWSGLKKYS 570
+KD +KAG D V EK + + + ++ DNV++ AS A++ K +
Sbjct: 550 AKDKSKSLTEKAGDAISGAYDSVKEKASDIADSFKAHSTNSKDNVENKASDAYNSAKDKA 609
Query: 571 SDYYQITTDYL-VTKVFVGDWAPEVLQNKTQSALNMTKSQVS 693
SD + T D K GD A + ++K +A + TK + S
Sbjct: 610 SDAWDKTKDKAGEAKDKAGD-AWDNTKDKAGNAWDSTKDKAS 650
Score = 27.9 bits (59), Expect = 8.2
Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = +1
Query: 517 DNVQSYASTAWSGLKKYSSDYYQITTDYLV-TKVFVGDWAPEVLQNKTQSALNMTKSQVS 693
DN + A AW K +SD + T D K GD A + ++K++S ++S
Sbjct: 632 DNTKDKAGNAWDSTKDKASDAWDTTKDKASDAKESAGD-AADSAKDKSKSITETIGDKIS 690
Query: 694 SYY 702
Y
Sbjct: 691 GAY 693
>AF016513-1|AAB69446.1| 733|Caenorhabditis elegans Ce-LEA protein.
Length = 733
Score = 35.9 bits (79), Expect = 0.031
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 1/102 (0%)
Frame = +1
Query: 391 SKDAFFIALKKAGILYGNVQDYVVEKTPVVIKTIEEYAPGLVDNVQSYASTAWSGLKKYS 570
+KD +KAG D V EK + + + ++ DNV++ AS A++ K +
Sbjct: 550 AKDKSKSLTEKAGDAISGAYDSVKEKASDIADSFKAHSTNSKDNVENKASDAYNSAKDKA 609
Query: 571 SDYYQITTDYL-VTKVFVGDWAPEVLQNKTQSALNMTKSQVS 693
SD + T D K GD A + ++K +A + TK + S
Sbjct: 610 SDAWDKTKDKAGEAKDKAGD-AWDNTKDKAGNAWDSTKDKAS 650
Score = 27.9 bits (59), Expect = 8.2
Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = +1
Query: 517 DNVQSYASTAWSGLKKYSSDYYQITTDYLV-TKVFVGDWAPEVLQNKTQSALNMTKSQVS 693
DN + A AW K +SD + T D K GD A + ++K++S ++S
Sbjct: 632 DNTKDKAGNAWDSTKDKASDAWDTTKDKASDAKESAGD-AADSAKDKSKSITETIGDKIS 690
Query: 694 SYY 702
Y
Sbjct: 691 GAY 693
>AL021466-1|CAA16282.1| 308|Caenorhabditis elegans Hypothetical
protein VF36H2L.1 protein.
Length = 308
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +1
Query: 283 WQKTLSTSARGYLWLETNAPVYYAQTVEICRPYTQLSKDAFFIALKKA 426
W +L S+ +L L T P + ++ +C +LS+ A+F+ LKKA
Sbjct: 42 WLVSLLFSSLAWLGLSTVLPDTFLLSLTVCIIAQELSRVAYFMLLKKA 89
>AF068718-3|AAO21430.1| 82|Caenorhabditis elegans Cystatin-like
protease inhibitorprotein 1, isoform b protein.
Length = 82
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/62 (27%), Positives = 31/62 (50%)
Frame = +1
Query: 229 TTGKLFKDLGILEHSQQAWQKTLSTSARGYLWLETNAPVYYAQTVEICRPYTQLSKDAFF 408
T G + +D E+S +AW+ + + N P YYA +++C PY + ++D
Sbjct: 23 TGGSVEQDASQKEYSDKAWKAVKGINDQA----SNNGPYYYAP-IKVCDPYERGAEDRTA 77
Query: 409 IA 414
+A
Sbjct: 78 LA 79
>Z81113-2|CAB03279.1| 510|Caenorhabditis elegans Hypothetical
protein T03F6.2 protein.
Length = 510
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +1
Query: 145 WASFVLLVSIAGLVAYDVSRAGGNFPK---STTGKLFKDLGILEHSQQ 279
W+SF S A L YD+++A F K F+D+G E ++Q
Sbjct: 178 WSSFSTTRSFAWLDHYDITQASNRFESRQIDQENKKFRDVGKQERNEQ 225
>Z93391-9|CAB07683.2| 392|Caenorhabditis elegans Hypothetical
protein W04G5.7 protein.
Length = 392
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = -3
Query: 651 ILKYLWGPITNKNFSNQIVSCDLIIVTRVLFESAPGRRCIALNVVYK--TRSILFNGFNN 478
+ K+LW ITN + + I + I ++ V + S P + N+ + + F GFN
Sbjct: 332 VTKWLWQNITNCDLTVVIALYEHIWISYVYYPSVPSEPGWSCNICFDDGEKYFFFAGFNL 391
Query: 477 D 475
D
Sbjct: 392 D 392
>Z81498-4|CAL63995.1| 392|Caenorhabditis elegans Hypothetical
protein W04G5.7 protein.
Length = 392
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = -3
Query: 651 ILKYLWGPITNKNFSNQIVSCDLIIVTRVLFESAPGRRCIALNVVYK--TRSILFNGFNN 478
+ K+LW ITN + + I + I ++ V + S P + N+ + + F GFN
Sbjct: 332 VTKWLWQNITNCDLTVVIALYEHIWISYVYYPSVPSEPGWSCNICFDDGEKYFFFAGFNL 391
Query: 477 D 475
D
Sbjct: 392 D 392
>Z70783-1|CAA94852.2| 765|Caenorhabditis elegans Hypothetical
protein ZK856.1 protein.
Length = 765
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +1
Query: 223 KSTTGKLFKDLGILEHSQQAWQKTLSTSARGYLWLETNAP 342
K G L +LG+LE+ A +K R +LE N+P
Sbjct: 200 KKICGNLLNELGVLEYMVYADKKLEEEQQRAKRYLEMNSP 239
>Z22181-5|CAA80183.1| 619|Caenorhabditis elegans Hypothetical
protein ZK632.6 protein.
Length = 619
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +1
Query: 94 FKDILDRMTSTRRNPWLWASFVLLVSIAGLVAYDV 198
F+ I+D +T PWLWA ++L V + LVA V
Sbjct: 468 FQQIID---ATNEKPWLWAVYILCV-LLPLVAIGV 498
>U80452-13|AAB37850.1| 139|Caenorhabditis elegans Hypothetical
protein C16C8.8 protein.
Length = 139
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = +1
Query: 526 QSYASTAWSGLKKYSSDYYQITTDYLVTKVFVGDWAPEVLQN 651
++ A+T + L + D + D+++ K F+GDWA ++N
Sbjct: 90 RNIATTVFFPLSPHGYDIPFKSADFILKKRFMGDWAITSMEN 131
>AC024801-9|AAF59653.3| 791|Caenorhabditis elegans Hypothetical
protein Y50D7A.1 protein.
Length = 791
Score = 27.9 bits (59), Expect = 8.2
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = -3
Query: 573 TRVLFESAP--GRRCIALNVVYKTRSILFNGFNNDRR 469
+RV+ SAP C A V + T+ ILF G +N RR
Sbjct: 183 SRVIISSAPYPSAMCYASLVTWGTQLILFGGNDNRRR 219
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,331,585
Number of Sequences: 27780
Number of extensions: 404734
Number of successful extensions: 1015
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 979
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1015
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -