Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4i10
         (728 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical ...    28   5.9  
Z81581-6|CAB04666.1|  679|Caenorhabditis elegans Hypothetical pr...    28   7.9  
Z75546-8|CAC42331.2|  640|Caenorhabditis elegans Hypothetical pr...    28   7.9  
U80439-9|AAO38675.1|  661|Caenorhabditis elegans Hypothetical pr...    28   7.9  
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr...    28   7.9  
U39649-3|AAM69070.1| 1538|Caenorhabditis elegans Hypothetical pr...    28   7.9  
U39649-2|AAM69069.1| 1534|Caenorhabditis elegans Hypothetical pr...    28   7.9  
U37429-16|AAA79341.1|  597|Caenorhabditis elegans Protein kinase...    28   7.9  
AF026521-1|AAB82588.1|  253|Caenorhabditis elegans histone H1.4 ...    28   7.9  
AF025666-1|AAB88885.1|  597|Caenorhabditis elegans protein kinas...    28   7.9  

>AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical
            protein F39C12.1 protein.
          Length = 5105

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
 Frame = +2

Query: 485  KLTKKPASTKLK---GKSSKADTLTNSPKMDSADEVTKLKKAMYEWDAKHPK 631
            +LTK  AS  +    GKS K   + + PK+ S  E   + K +   D K P+
Sbjct: 2986 ELTKSEASRNVSSSSGKSQKQADVQSRPKLQSVQEKRSVPKVVKPLDPKGPQ 3037


>Z81581-6|CAB04666.1|  679|Caenorhabditis elegans Hypothetical
           protein T02E1.3b protein.
          Length = 679

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 12/28 (42%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
 Frame = +2

Query: 143 DFTPNEEDN-AYTMNKCCDFWEAVGGCA 223
           +FT N E N A    K CD W   G C+
Sbjct: 58  NFTSNREHNPALRKTKICDHWRRSGSCS 85


>Z75546-8|CAC42331.2|  640|Caenorhabditis elegans Hypothetical
           protein R05D11.9 protein.
          Length = 640

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 19/68 (27%), Positives = 31/68 (45%)
 Frame = +2

Query: 131 NVVFDFTPNEEDNAYTMNKCCDFWEAVGGCAELKKLKVLPEKQSVNKSRISQDISKPLLV 310
           N VF  T  E+D       C + W+++    E+      P K S+  S +SQ +++ L  
Sbjct: 80  NSVFFETVLEDDQL-----CTELWDSILHQCEVSTAPTEPAKDSILFSAVSQYVTRILPC 134

Query: 311 HETVKSEV 334
            ET  S +
Sbjct: 135 DETAPSSM 142


>U80439-9|AAO38675.1|  661|Caenorhabditis elegans Hypothetical
           protein C01G8.9b protein.
          Length = 661

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
 Frame = +2

Query: 461 IIERRQSLKLTKKPASTKLKGKSSKADTLTNSPKMDSADEV-TKLKKAMYEWDAKHPKSM 637
           II R   L + +   S+K  G    A+ L  +PK  SADE   K K  + E DA   + +
Sbjct: 191 IIGRLLKLNVKEHKISSKRPGIVMSAEELKTAPKQLSADEKRAKEKSVLDEVDATTAQMV 250

Query: 638 E 640
           E
Sbjct: 251 E 251


>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical protein
            C01G8.9a protein.
          Length = 1724

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
 Frame = +2

Query: 461  IIERRQSLKLTKKPASTKLKGKSSKADTLTNSPKMDSADEV-TKLKKAMYEWDAKHPKSM 637
            II R   L + +   S+K  G    A+ L  +PK  SADE   K K  + E DA   + +
Sbjct: 1254 IIGRLLKLNVKEHKISSKRPGIVMSAEELKTAPKQLSADEKRAKEKSVLDEVDATTAQMV 1313

Query: 638  E 640
            E
Sbjct: 1314 E 1314


>U39649-3|AAM69070.1| 1538|Caenorhabditis elegans Hypothetical
           protein T23F2.2b protein.
          Length = 1538

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 27/120 (22%), Positives = 58/120 (48%), Gaps = 4/120 (3%)
 Frame = +2

Query: 221 AELKK--LKVLPEKQSVNK--SRISQDISKPLLVHETVKSEVEGRSALSMLEIVEGKGLI 388
           A+LKK   + L E+   +K  S +   + +  + +ET  +  EG+  +   E +E + L 
Sbjct: 207 AQLKKELRQALSERDEKDKHLSDLRDKVKEIEIFNETQNTLAEGQKMMRK-EQIEKEALE 265

Query: 389 NRVFETKMPQSSCAVSDREYLDHCIIERRQSLKLTKKPASTKLKGKSSKADTLTNSPKMD 568
               E K+ +   AV   + +   +  R +++KLT + A+ + +    K+D  T + +++
Sbjct: 266 K---EKKLLEKKHAVRVNQLIQETMTAREEAVKLTSRVANLEEQLNPPKSDCETQTDEIE 322


>U39649-2|AAM69069.1| 1534|Caenorhabditis elegans Hypothetical
           protein T23F2.2a protein.
          Length = 1534

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 27/120 (22%), Positives = 58/120 (48%), Gaps = 4/120 (3%)
 Frame = +2

Query: 221 AELKK--LKVLPEKQSVNK--SRISQDISKPLLVHETVKSEVEGRSALSMLEIVEGKGLI 388
           A+LKK   + L E+   +K  S +   + +  + +ET  +  EG+  +   E +E + L 
Sbjct: 207 AQLKKELRQALSERDEKDKHLSDLRDKVKEIEIFNETQNTLAEGQKMMRK-EQIEKEALE 265

Query: 389 NRVFETKMPQSSCAVSDREYLDHCIIERRQSLKLTKKPASTKLKGKSSKADTLTNSPKMD 568
               E K+ +   AV   + +   +  R +++KLT + A+ + +    K+D  T + +++
Sbjct: 266 K---EKKLLEKKHAVRVNQLIQETMTAREEAVKLTSRVANLEEQLNPPKSDCETQTDEIE 322


>U37429-16|AAA79341.1|  597|Caenorhabditis elegans Protein kinase c
           protein 3 protein.
          Length = 597

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
 Frame = +2

Query: 443 EYLDHCIIERRQSL-KLTKKPASTKLKGKSSKADTLTNSPKMDSADEVTKLKKAMY---- 607
           +YL   I+ER+  + +     AS  LKG  +K  T     K+D  + +  +K+  +    
Sbjct: 466 DYLFQIILERQIRIPRSLSVRASGILKGFLNKDPTERLGCKLDINEGLRDMKEHQFFRGF 525

Query: 608 -EWDAKHPKSMEPPGHSPAL 664
            +W+A   K++ PP H PA+
Sbjct: 526 IDWEALEQKAVAPPYH-PAV 544


>AF026521-1|AAB82588.1|  253|Caenorhabditis elegans histone H1.4
           protein.
          Length = 253

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 17/46 (36%), Positives = 25/46 (54%)
 Frame = +2

Query: 491 TKKPASTKLKGKSSKADTLTNSPKMDSADEVTKLKKAMYEWDAKHP 628
           T+ PA+     K++KA   T +PK   A + TK+   M + DA HP
Sbjct: 11  TETPAAPTKASKATKASKATKAPKATKA-KTTKVP--MVKADAAHP 53


>AF025666-1|AAB88885.1|  597|Caenorhabditis elegans protein kinase
           C3 protein.
          Length = 597

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
 Frame = +2

Query: 443 EYLDHCIIERRQSL-KLTKKPASTKLKGKSSKADTLTNSPKMDSADEVTKLKKAMY---- 607
           +YL   I+ER+  + +     AS  LKG  +K  T     K+D  + +  +K+  +    
Sbjct: 466 DYLFQIILERQIRIPRSLSVRASGILKGFLNKDPTERLGCKLDINEGLRDMKEHQFFRGF 525

Query: 608 -EWDAKHPKSMEPPGHSPAL 664
            +W+A   K++ PP H PA+
Sbjct: 526 IDWEALEQKAVAPPYH-PAV 544


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,399,783
Number of Sequences: 27780
Number of extensions: 370490
Number of successful extensions: 1044
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 958
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1042
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)