Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte4i05
(301 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC25G10.03 |zip1||transcription factor Zip1|Schizosaccharomyce... 28 0.34
SPBC28F2.10c |kap1||chromatin remodeling complex subunit Ngg1 |S... 27 0.45
SPAC23H3.06 |apl6||AP-3 adaptor complex subunit Apl6 |Schizosacc... 27 0.78
SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineur... 26 1.0
SPBC2F12.13 |klp5|sot1|kinesin-like protein Klp5|Schizosaccharom... 26 1.0
SPBC8D2.19 |mde3||serine/threonine protein kinase Mde3|Schizosac... 26 1.4
SPBC354.10 |||RNAPII degradation factor |Schizosaccharomyces pom... 26 1.4
SPBC317.01 |mbx2|pvg4|MADS-box transcription factor Pvg4|Schizos... 25 1.8
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 25 1.8
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 25 2.4
SPAC13A11.02c |erg11||sterol 14-demethylase|Schizosaccharomyces ... 25 3.1
SPBC1706.01 |tea4|wsh3|tip elongation aberrant protein Tea4|Schi... 25 3.1
SPBC15C4.05 |||ATP-dependent RNA/DNA helicase |Schizosaccharomyc... 24 4.2
SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces p... 24 4.2
SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyce... 24 5.5
SPCC24B10.03 |||sequence orphan|Schizosaccharomyces pombe|chr 3|... 24 5.5
SPCP1E11.11 |||Puf family RNA-binding protein|Schizosaccharomyce... 24 5.5
SPAC16C9.05 |||PHD finger containing protein|Schizosaccharomyces... 24 5.5
SPAC26H5.07c |||seven transmembrane receptor-like protein|Schizo... 24 5.5
SPAC23H4.01c ||SPAP27G11.01|sterol binding ankyrin repeat protei... 24 5.5
SPAC17G6.04c |cpp1||protein farnesyltransferase beta subunit Cpp... 24 5.5
SPCC550.05 |nse1||Smc5-6 complex non-SMC subunit 1|Schizosacchar... 23 7.3
SPBC21D10.05c |ucp3|soc2|GTPase activating protein Ucp3 |Schizos... 23 7.3
SPAC25B8.13c |isp7||2-OG-Fe|Schizosaccharomyces pombe|chr 1|||Ma... 23 7.3
SPAC7D4.12c |||DUF1212 family protein|Schizosaccharomyces pombe|... 23 7.3
SPCC417.12 |||carboxylesterase-lipase family |Schizosaccharomyce... 23 7.3
SPCC1020.12c ||SPCC14G10.06|xap-5-like protein|Schizosaccharomyc... 23 7.3
SPBC21C3.11 |ubx4||UBX domain protein Ubx4 |Schizosaccharomyces ... 23 7.3
SPAC27E2.04c |mug155||sequence orphan|Schizosaccharomyces pombe|... 23 9.6
SPAC23E2.03c |ste7||meiotic suppressor protein Ste7|Schizosaccha... 23 9.6
SPBC27B12.06 |gpi13||pig-O |Schizosaccharomyces pombe|chr 2|||Ma... 23 9.6
SPAC13A11.01c |rga8|SPAC2F7.18c|GTPase activating protein Rga8 |... 23 9.6
SPCC132.01c ||SPCC1322.17c|DUF814 family protein|Schizosaccharom... 23 9.6
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 23 9.6
SPAC17H9.17c |mdm10||Mdm10/Mdm12/Mmm1 complex subunit Mdm10 |Sch... 23 9.6
SPBC36.02c |||spermidine family transporter |Schizosaccharomyces... 23 9.6
SPCC1620.03 |mug163||sequence orphan|Schizosaccharomyces pombe|c... 23 9.6
>SPAC25G10.03 |zip1||transcription factor Zip1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 330
Score = 27.9 bits (59), Expect = 0.34
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Frame = +2
Query: 143 LPTSDIASNILNEQVPKPVSSNYVNSTISNP--TF-DVNLQPLSEPS 274
+PTS+ +S+I N + PVSS + +NP TF +L +S PS
Sbjct: 193 IPTSEASSSINNTPLQAPVSSFADQNAFTNPLSTFASPDLASVSSPS 239
>SPBC28F2.10c |kap1||chromatin remodeling complex subunit Ngg1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 551
Score = 27.5 bits (58), Expect = 0.45
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +2
Query: 134 VEVLPTSDIASNILNEQVPKPVSSNYVNSTISNPTFDVNLQP 259
V+ PTSD+ S + S N N+ IS TF +L P
Sbjct: 202 VDSFPTSDVRSLVAGTPATDDFSHNKPNNQISISTFYSSLDP 243
>SPAC23H3.06 |apl6||AP-3 adaptor complex subunit Apl6
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 745
Score = 26.6 bits (56), Expect = 0.78
Identities = 20/68 (29%), Positives = 30/68 (44%)
Frame = +2
Query: 68 ADNQQRNEEMECDALFAESDDEVEVLPTSDIASNILNEQVPKPVSSNYVNSTISNPTFDV 247
A + E E + +ES+DE T D + NE+ P N+T S T +
Sbjct: 675 ASETSESSEGEYETSTSESEDE----ETDDTSQEEDNEKNSTPDEDTENNNTSSISTKSI 730
Query: 248 NLQPLSEP 271
+PL+EP
Sbjct: 731 MDRPLTEP 738
>SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineurin
deletion Rnc1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 398
Score = 26.2 bits (55), Expect = 1.0
Identities = 17/73 (23%), Positives = 30/73 (41%)
Frame = +2
Query: 74 NQQRNEEMECDALFAESDDEVEVLPTSDIASNILNEQVPKPVSSNYVNSTISNPTFDVNL 253
N + E D F + DE T+ A+ I +P P S +++ + T ++
Sbjct: 11 NIEEKENSFFDVTFQDEPDE-----TTSTATGIAKVSIPTPKPSTPLSTLTNGSTIQQSM 65
Query: 254 QPLSEPSSXHTPV 292
EP+S P+
Sbjct: 66 TNQPEPTSQVPPI 78
>SPBC2F12.13 |klp5|sot1|kinesin-like protein
Klp5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 883
Score = 26.2 bits (55), Expect = 1.0
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +2
Query: 86 NEEMECDALFAESDDEVEV-LPTSDIASNILNEQVPKPVSSNYVNSTISNPTFDVN 250
+E + D L AE +V LP D ++ VPK N+ + + +PTF +N
Sbjct: 781 SESTQLDQLLAEDSSTDDVSLPHLDTI-DLDGSPVPKVPDLNFSRANMDSPTFILN 835
>SPBC8D2.19 |mde3||serine/threonine protein kinase
Mde3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 559
Score = 25.8 bits (54), Expect = 1.4
Identities = 16/51 (31%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
Frame = +2
Query: 137 EVLPTSDIASNILNEQVPKPVSSNYVNSTISNPTFDVNLQ-PLSEPSSXHT 286
+V PT+ + P SN V ISNP + NL P+S T
Sbjct: 310 DVRPTAKYCKEVFFPLPPSASKSNSVPQKISNPKVEQNLGFPISREDKKST 360
>SPBC354.10 |||RNAPII degradation factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 963
Score = 25.8 bits (54), Expect = 1.4
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +2
Query: 116 AESDDEVEVLPTSDIASNILNEQVPKPVSSNYVNSTISNPTFDVNLQPLSEPSSXHTPVP 295
AES + TS S +VP+ + ++VN T DVNL P S +S + +P
Sbjct: 489 AESTKIPKKQHTSAYESRAPQSKVPENLKESHVNETPYRGLHDVNL-PASGNASSVSAIP 547
Query: 296 EE 301
+
Sbjct: 548 PQ 549
>SPBC317.01 |mbx2|pvg4|MADS-box transcription factor
Pvg4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 372
Score = 25.4 bits (53), Expect = 1.8
Identities = 10/21 (47%), Positives = 11/21 (52%), Gaps = 2/21 (9%)
Frame = -3
Query: 140 PPLHHHSQQTK--HHTPFLHF 84
PP HH T+ HH P HF
Sbjct: 164 PPTQHHHPHTRPPHHPPHPHF 184
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 25.4 bits (53), Expect = 1.8
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = +2
Query: 149 TSDIASNILNEQVPKPVSSNYVNSTISNPTFDVNLQPLSEPSSXHTPVPEE 301
+S+ A + N+ P SS ST + PT N Q P P+P E
Sbjct: 466 SSEEAKSTTNDSSPPKDSS----STSTQPTEQSNAQQAPSPKEEERPLPSE 512
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 25.0 bits (52), Expect = 2.4
Identities = 26/93 (27%), Positives = 40/93 (43%), Gaps = 1/93 (1%)
Frame = +2
Query: 26 SSLGAILDTAFTSSADNQQRNEEMECDALFAESDDEVEVLPTSDIASNILNEQVPKPVSS 205
+ +G D +F S +N +N E + + + PTS+ + +LNE VP+
Sbjct: 48 TQVGEDADNSFIS--ENTPKNT-FESTQTYENLESISKNEPTSEASKPLLNELVPE---- 100
Query: 206 NYVNSTISNPTFDVNLQPL-SEPSSXHTPVPEE 301
+ P V +PL EP PVPEE
Sbjct: 101 EPLPREPPLPNEPVPEEPLPGEPPLPDEPVPEE 133
>SPAC13A11.02c |erg11||sterol 14-demethylase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 495
Score = 24.6 bits (51), Expect = 3.1
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = -3
Query: 170 YLMQYQMWVAPPLHHHSQQTKHHTP 96
Y++Q + + PP+H H ++ K P
Sbjct: 341 YVIQETLRLHPPIHSHMRKVKRDLP 365
>SPBC1706.01 |tea4|wsh3|tip elongation aberrant protein
Tea4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 24.6 bits (51), Expect = 3.1
Identities = 17/89 (19%), Positives = 39/89 (43%)
Frame = +2
Query: 23 PSSLGAILDTAFTSSADNQQRNEEMECDALFAESDDEVEVLPTSDIASNILNEQVPKPVS 202
PSS A+ +++ + D + N+E+ +A + + + TS++ + N+ +P+S
Sbjct: 424 PSSYSAVSESS-NFTHDVSRDNKEISLNAPKSIIVSQSDSFDTSNVTQDAPNDVEKEPIS 482
Query: 203 SNYVNSTISNPTFDVNLQPLSEPSSXHTP 289
N+ + + P+ S P
Sbjct: 483 GQMPNNLSVQSLKQLEVYPIRHSVSIEMP 511
>SPBC15C4.05 |||ATP-dependent RNA/DNA helicase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1428
Score = 24.2 bits (50), Expect = 4.2
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = +2
Query: 173 LNEQVPKPVSSNYVNSTISNPTFDVNLQP 259
++E + ++ N +NS SN +F +QP
Sbjct: 185 IDEYITWMITENLINSEPSNSSFSYEVQP 213
>SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 526
Score = 24.2 bits (50), Expect = 4.2
Identities = 9/34 (26%), Positives = 19/34 (55%)
Frame = +2
Query: 104 DALFAESDDEVEVLPTSDIASNILNEQVPKPVSS 205
D L+ E DD+ ++ + N++NE+ + V +
Sbjct: 18 DGLYPEDDDDADMDQDKNPEENVMNEKEDEDVDA 51
>SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 855
Score = 23.8 bits (49), Expect = 5.5
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = -3
Query: 161 QYQMWVAPPLHHHSQQTKHHTPF 93
Q +W PP H H + K H F
Sbjct: 515 QVFIWDLPPQHMHKTKKKKHEHF 537
>SPCC24B10.03 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 128
Score = 23.8 bits (49), Expect = 5.5
Identities = 16/58 (27%), Positives = 25/58 (43%)
Frame = +2
Query: 56 FTSSADNQQRNEEMECDALFAESDDEVEVLPTSDIASNILNEQVPKPVSSNYVNSTIS 229
F N Q NE+ L A + +E L S+ ++NEQ+ + S V +S
Sbjct: 23 FMKDWKNSQPNEQGRWLHLDARMNRNIEDLEISNYNLRLMNEQLESQLLSLNVKPVVS 80
>SPCP1E11.11 |||Puf family RNA-binding protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 642
Score = 23.8 bits (49), Expect = 5.5
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +2
Query: 26 SSLGAILDTAFTSSADNQQRNEEMECDALFAESDDE 133
SSL D F ++ N+E+E AE+D+E
Sbjct: 63 SSLNESEDEDFAGFGESASENDELESAESEAENDEE 98
>SPAC16C9.05 |||PHD finger containing protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 404
Score = 23.8 bits (49), Expect = 5.5
Identities = 12/49 (24%), Positives = 23/49 (46%)
Frame = +2
Query: 122 SDDEVEVLPTSDIASNILNEQVPKPVSSNYVNSTISNPTFDVNLQPLSE 268
S V + + + +NE P +N + S+ + T VN+ P+S+
Sbjct: 9 SQPTVPSISNNSHGDSFVNEGPPSNFKNNSLTSSTHSSTDHVNVLPISQ 57
>SPAC26H5.07c |||seven transmembrane receptor-like
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 505
Score = 23.8 bits (49), Expect = 5.5
Identities = 11/46 (23%), Positives = 25/46 (54%)
Frame = +2
Query: 146 PTSDIASNILNEQVPKPVSSNYVNSTISNPTFDVNLQPLSEPSSXH 283
PT + ++EQV + V + S++SN + ++ + + P++ H
Sbjct: 426 PTENNRRFAMSEQVAQDVDEFEMTSSLSNDSLHLHHERPTSPANPH 471
>SPAC23H4.01c ||SPAP27G11.01|sterol binding ankyrin repeat
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 945
Score = 23.8 bits (49), Expect = 5.5
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = +2
Query: 2 SSWDVPGPSSLGAILDTAFTSSADNQQRNEEMECDALFAESDDEVEVLPTSDIASNILNE 181
+S D S +I DT+ SSA ++Q N +L + D+ P ++ SN N+
Sbjct: 433 TSLDADRDSDTSSISDTSSNSSAPHEQLN----ATSLASTVDESSRSPPLPEVESNKEND 488
>SPAC17G6.04c |cpp1||protein farnesyltransferase beta subunit
Cpp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 382
Score = 23.8 bits (49), Expect = 5.5
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +1
Query: 4 FLGRSRTVVSGCYS 45
F GRS +V GCYS
Sbjct: 244 FSGRSNKLVDGCYS 257
>SPCC550.05 |nse1||Smc5-6 complex non-SMC subunit
1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 232
Score = 23.4 bits (48), Expect = 7.3
Identities = 9/17 (52%), Positives = 12/17 (70%), Gaps = 2/17 (11%)
Frame = +1
Query: 25 VVSG--CYSGYCLHI*C 69
V++G C GYCLH+ C
Sbjct: 191 VIAGYVCDCGYCLHVYC 207
>SPBC21D10.05c |ucp3|soc2|GTPase activating protein Ucp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 601
Score = 23.4 bits (48), Expect = 7.3
Identities = 24/77 (31%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Frame = +2
Query: 20 GPSSLGAIL--DTAFTSSADNQQRNEEMECDALFAESDDEVEVLPTSDIASNILNEQVPK 193
G S+ A L T + SSA+N + + D + LP D++ LNEQ
Sbjct: 374 GSSTQNASLMGSTGYPSSANNVYYENSYQ--GVGTSMSDNYQ-LP--DMSKLSLNEQPAA 428
Query: 194 PVSSNYVNSTISNPTFD 244
P +SN S PT D
Sbjct: 429 PSNSNSQYMNTSMPTLD 445
>SPAC25B8.13c |isp7||2-OG-Fe|Schizosaccharomyces pombe|chr
1|||Manual
Length = 397
Score = 23.4 bits (48), Expect = 7.3
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = +2
Query: 56 FTSSADNQQRNEEMECDALFAESDDEVEVLPTSDIASNILNEQVPKP 196
+ SS + E + DAL S D V+ L D SN P P
Sbjct: 264 YPSSPNRLGVQEHTDADALTLMSQDNVKGLEILDPVSNCFLSVSPAP 310
>SPAC7D4.12c |||DUF1212 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 759
Score = 23.4 bits (48), Expect = 7.3
Identities = 21/78 (26%), Positives = 31/78 (39%)
Frame = +2
Query: 44 LDTAFTSSADNQQRNEEMECDALFAESDDEVEVLPTSDIASNILNEQVPKPVSSNYVNST 223
L T+F SS Q +E D E DD +VLP + P P + S
Sbjct: 20 LQTSFPSSTSFQTPTFLIEEDDEDTEDDDGPQVLPV---------HRAPSPAAFRKRGSI 70
Query: 224 ISNPTFDVNLQPLSEPSS 277
S + VN+ + P++
Sbjct: 71 TSMDQYLVNMPAVPSPTA 88
>SPCC417.12 |||carboxylesterase-lipase family |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 520
Score = 23.4 bits (48), Expect = 7.3
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +2
Query: 116 AESDDEVEVLPTSDIASNILN 178
AE +++ +P D+A NILN
Sbjct: 260 AEKLEKLRAIPFQDLADNILN 280
>SPCC1020.12c ||SPCC14G10.06|xap-5-like protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 288
Score = 23.4 bits (48), Expect = 7.3
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +3
Query: 138 RCYPHLILHQIYLTNR 185
+C PHL+ YL NR
Sbjct: 238 QCIPHLVQKSYYLQNR 253
>SPBC21C3.11 |ubx4||UBX domain protein Ubx4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 425
Score = 23.4 bits (48), Expect = 7.3
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 4/59 (6%)
Frame = +2
Query: 41 ILDTAFTSSADNQQRNEEMECDALFAES----DDEVEVLPTSDIASNILNEQVPKPVSS 205
+ + A S N E+ D + ES DD VE P + ++ L E +P P+ S
Sbjct: 170 VSEQAPVSQTFNGDVKEKKNADLMDIESENKKDDIVESFPKYPVDAHKLLEPLPTPIPS 228
>SPAC27E2.04c |mug155||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 187
Score = 23.0 bits (47), Expect = 9.6
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -1
Query: 172 YI*CNIRCG*HLHFIITLSKQSITLHF 92
Y IRC FI +LSK+ I+ HF
Sbjct: 62 YCRLKIRCRLKKKFIKSLSKKIISYHF 88
>SPAC23E2.03c |ste7||meiotic suppressor protein
Ste7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 569
Score = 23.0 bits (47), Expect = 9.6
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = +2
Query: 152 SDIASNILNEQVPKPVSSNYVNSTISNPTFDVNLQPLSEPSSXHT 286
S S+ Q+P+ S S P+F+ N P++ S+ HT
Sbjct: 161 SSFGSSAKTFQLPEFDSVTPSASLYKQPSFNSNPAPITTSSATHT 205
>SPBC27B12.06 |gpi13||pig-O |Schizosaccharomyces pombe|chr
2|||Manual
Length = 918
Score = 23.0 bits (47), Expect = 9.6
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +2
Query: 206 NYVNSTISNPTFDVNLQPL 262
+Y+N T+S P F N+ L
Sbjct: 194 DYLNETLSQPAFSFNVPDL 212
>SPAC13A11.01c |rga8|SPAC2F7.18c|GTPase activating protein Rga8
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 777
Score = 23.0 bits (47), Expect = 9.6
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +2
Query: 23 PSSLGAILDTAFTSSADNQQRNEEMECDALFAESDDEVEVLPTSDIASN-ILNEQVPKPV 199
P S+ ++ + T+ + EE++ + AES+ +E +PTS I S+ LN +
Sbjct: 684 PDSISSV--RSHTAVESPRSSFEELQPSEIPAESEFTLENVPTSLIRSSYALN---TRKT 738
Query: 200 SSNYVNSTISN 232
N+ +S+ SN
Sbjct: 739 RRNFSHSSASN 749
>SPCC132.01c ||SPCC1322.17c|DUF814 family
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1021
Score = 23.0 bits (47), Expect = 9.6
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +2
Query: 98 ECDALFAESDDEVEVLPTSDIASNILNEQVPKPVS 202
E +A E LP ++S+ +VPKPVS
Sbjct: 188 EISTAYASPTSINEPLPDQQLSSSTKPIKVPKPVS 222
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 23.0 bits (47), Expect = 9.6
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +2
Query: 119 ESDDEVEV-LPTSDIASNILNEQVPKPVSSNYVNSTISNPTFDVNLQPLS 265
E EVE+ +P I Q P S+ ++++PTF+V +PL+
Sbjct: 372 EQVTEVELSIPVPSIQE--AESQKPVLTGSSMRRPSVTSPTFEVAARPLT 419
>SPAC17H9.17c |mdm10||Mdm10/Mdm12/Mmm1 complex subunit Mdm10
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 370
Score = 23.0 bits (47), Expect = 9.6
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +2
Query: 161 ASNILNEQVPKPVSSNYVNSTISN 232
A NILN ++P VS + T SN
Sbjct: 31 ADNILNFEIPSGVSCQLSSLTSSN 54
>SPBC36.02c |||spermidine family transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 577
Score = 23.0 bits (47), Expect = 9.6
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 113 FAESDDEVEVLPTSDIASNIL 175
F + E EVL SDIA N L
Sbjct: 336 FVHAKSEEEVLTLSDIAKNYL 356
>SPCC1620.03 |mug163||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 186
Score = 23.0 bits (47), Expect = 9.6
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +2
Query: 71 DNQQRNEEMECDALFAESDDEVE 139
DN +RN +C+ + A D +E
Sbjct: 164 DNLERNRSRQCEKISALKPDPIE 186
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,244,188
Number of Sequences: 5004
Number of extensions: 23536
Number of successful extensions: 127
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 127
length of database: 2,362,478
effective HSP length: 63
effective length of database: 2,047,226
effective search space used: 73700136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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