Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte4i05
(301 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_06_0192 - 21450158-21450276,21451084-21451573,21451750-214518... 29 0.51
02_05_0498 - 29520062-29520758,29521552-29521860,29523525-29524735 29 0.89
01_06_0746 - 31636024-31641396 28 1.2
06_03_0559 + 22148773-22149210,22149478-22149684,22150065-221504... 28 1.6
06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,805... 27 2.7
05_07_0200 - 28368890-28369021,28369169-28369303,28369918-283699... 27 2.7
04_04_0751 - 27769616-27769684,27769795-27769917,27769998-277707... 27 2.7
06_02_0006 + 10528423-10528768,10529132-10529201,10530820-105308... 27 3.6
05_03_0458 + 14280953-14281866,14281964-14282912 27 3.6
04_04_1377 - 33064906-33065607 27 3.6
12_02_0979 - 25009721-25009975,25010058-25010127,25010216-250103... 26 6.3
06_03_0609 + 22710442-22713502,22713596-22713948 26 6.3
03_02_0464 - 8683232-8684596 26 6.3
11_06_0247 - 21669299-21669348,21669673-21670012,21670110-216701... 25 8.3
10_08_0761 - 20396987-20397925 25 8.3
10_03_0041 + 7314749-7315012,7315111-7316157,7317592-7317681,731... 25 8.3
06_03_0098 - 16621473-16621511,16621617-16621655,16621741-166220... 25 8.3
05_01_0431 + 3412178-3412336,3413012-3413109,3413185-3413312,341... 25 8.3
04_04_1478 - 33882625-33883639,33883725-33883849,33883935-338841... 25 8.3
04_04_0254 - 23951495-23951902,23952000-23952155,23952344-239524... 25 8.3
04_03_0594 - 17733827-17735085,17735576-17735642,17736379-177364... 25 8.3
03_04_0228 - 18989688-18989807,18990300-18990345,18990452-189905... 25 8.3
03_02_0367 + 7834072-7834479,7834555-7834779,7834858-7835082,783... 25 8.3
02_03_0396 - 18568908-18569032,18569157-18569262 25 8.3
>09_06_0192 -
21450158-21450276,21451084-21451573,21451750-21451862,
21451992-21452376,21452461-21452529,21453165-21453264,
21454465-21454637,21454737-21454782,21454879-21454954,
21455160-21455196,21455799-21456041
Length = 616
Score = 29.5 bits (63), Expect = 0.51
Identities = 19/51 (37%), Positives = 28/51 (54%)
Frame = +2
Query: 146 PTSDIASNILNEQVPKPVSSNYVNSTISNPTFDVNLQPLSEPSSXHTPVPE 298
PT + ++ + P+P S+ Y +STI+ T VN Q L PS H VP+
Sbjct: 495 PTHNGTASTSHSAGPQPSSAPYASSTIT--THRVNCQSL--PSQQHGSVPQ 541
>02_05_0498 - 29520062-29520758,29521552-29521860,29523525-29524735
Length = 738
Score = 28.7 bits (61), Expect = 0.89
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = -3
Query: 164 MQYQMWVAPPLHHHSQQTKHHTPFLHFSVDCQH 66
+Q M VAP HH QQ HH P L + QH
Sbjct: 692 LQTGMMVAPT-HHREQQKHHHHPHLQPHGEEQH 723
>01_06_0746 - 31636024-31641396
Length = 1790
Score = 28.3 bits (60), Expect = 1.2
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -3
Query: 203 MILVWAPVR*VYLMQYQMWVA 141
+I++W PV +YLM Q+W A
Sbjct: 551 VIILWLPVIIIYLMDIQIWYA 571
>06_03_0559 +
22148773-22149210,22149478-22149684,22150065-22150471,
22150655-22151472,22151564-22151674,22151846-22152015
Length = 716
Score = 27.9 bits (59), Expect = 1.6
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +2
Query: 119 ESDDEVEVLPTSDIASNILNEQVPKPVSSNYVNSTISNP 235
E +DE E PT S+ +++ +P+SSN +ST+S+P
Sbjct: 222 EEEDEEEFQPTPISTSSQRSQKGKRPLSSN--SSTLSSP 258
>06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,
8057595-8058314,8058404-8058603,8058988-8059172,
8059287-8059354,8059432-8060246,8060502-8060599,
8060702-8060887,8061358-8061538,8061651-8061812,
8061894-8061937,8062059-8062115,8062409-8062505,
8062614-8062786,8062868-8063081,8063270-8063395,
8064072-8064188,8064459-8064566,8064729-8064898,
8065049-8065127,8065211-8065285,8065845-8065942,
8066030-8066137,8066238-8066295,8066527-8066631,
8067461-8069516,8069804-8070697,8070896-8071852,
8072022-8072075,8072157-8072222,8072294-8073472,
8073868-8075598,8075764-8075829,8076763-8077788,
8077893-8078041
Length = 4264
Score = 27.1 bits (57), Expect = 2.7
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +2
Query: 20 GPSSLGAILDTAFTSSADNQQRNEEMECDALFAESDDEVEVLPTSDIA 163
GPSS+ A+L ++ Q+R E D+ FA + D+ V TS+++
Sbjct: 3973 GPSSVPAVLQLTDSNQPAEQERLE--NSDSKFASTKDQGRVDGTSNLS 4018
>05_07_0200 -
28368890-28369021,28369169-28369303,28369918-28369947,
28370019-28370093,28370222-28370333,28370440-28370621,
28370723-28370854,28372193-28373479
Length = 694
Score = 27.1 bits (57), Expect = 2.7
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = +2
Query: 32 LGAILDTAFTSSADNQQRNEEME 100
L A LD A SS DN+QR EME
Sbjct: 163 LRAALDAAAASSRDNEQRILEME 185
>04_04_0751 - 27769616-27769684,27769795-27769917,27769998-27770770,
27771407-27771773,27772104-27772217,27772307-27772403,
27772968-27773088,27773168-27773252,27773349-27773498,
27773630-27773746,27773819-27773905,27773981-27774049,
27774125-27774181,27774266-27774349,27774477-27774513,
27774721-27774869,27776053-27776538,27776743-27776886,
27776961-27777509,27778332-27778526,27779226-27779310,
27779570-27779670,27779689-27780360,27781101-27781433,
27781957-27782038,27782258-27782334,27782713-27782817,
27783810-27783944,27784437-27785159,27785882-27786663,
27787480-27789187
Length = 2891
Score = 27.1 bits (57), Expect = 2.7
Identities = 16/71 (22%), Positives = 28/71 (39%)
Frame = +2
Query: 29 SLGAILDTAFTSSADNQQRNEEMECDALFAESDDEVEVLPTSDIASNILNEQVPKPVSSN 208
S I+ S D + NE++E D + DD ++ + +I + N
Sbjct: 1960 STAPIITAEAMSVDDRNEDNEQLESDTTQSSVDDRLQQADQQSVKGSIDSRGSGISADRN 2019
Query: 209 YVNSTISNPTF 241
V ST+ P +
Sbjct: 2020 LVRSTVIAPGY 2030
>06_02_0006 +
10528423-10528768,10529132-10529201,10530820-10530892,
10530973-10531053,10532124-10532239,10532339-10532630
Length = 325
Score = 26.6 bits (56), Expect = 3.6
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Frame = +2
Query: 68 ADNQQRNEEMECDALFAESDDEVEVLPTSDIASNILNEQVPKPVS--SNYVNSTISNPTF 241
A Q+N + C+ EV +PT+D I P PV+ SN ++ T +P
Sbjct: 238 AGQVQKNAPLYCEVKIVCDGKEVTTVPTADPTPPI----SPSPVNNKSNSISPTPLSPAP 293
Query: 242 DVNLQPLSEPSSXHT 286
D N + +++ T
Sbjct: 294 DHNNRAVADDDKKET 308
>05_03_0458 + 14280953-14281866,14281964-14282912
Length = 620
Score = 26.6 bits (56), Expect = 3.6
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +2
Query: 146 PTSDIASNILNEQVPKPVSSNYVNSTISNPTFDVNLQPLSEPSSXHTPVP 295
PTS +S P P SSN ++ + PT +L S PSS + P
Sbjct: 19 PTSPPSS--CRNAAPSPPSSNSTPTSSTTPTVPPSLTTTSSPSSSPSSPP 66
>04_04_1377 - 33064906-33065607
Length = 233
Score = 26.6 bits (56), Expect = 3.6
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -3
Query: 164 MQYQMWVAPPLHHHSQQTKHH 102
+Q M VAP HH +Q HH
Sbjct: 163 LQTGMMVAPTTHHRERQKHHH 183
>12_02_0979 -
25009721-25009975,25010058-25010127,25010216-25010381,
25010501-25010651,25010843-25010890,25011172-25011225,
25011400-25011513,25012666-25012782,25012899-25012991,
25013085-25013123,25013990-25014055
Length = 390
Score = 25.8 bits (54), Expect = 6.3
Identities = 8/15 (53%), Positives = 13/15 (86%)
Frame = +3
Query: 27 RLWVLFWILPSHLVL 71
++WV +W+L S+LVL
Sbjct: 304 QIWVYYWVLASNLVL 318
>06_03_0609 + 22710442-22713502,22713596-22713948
Length = 1137
Score = 25.8 bits (54), Expect = 6.3
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -3
Query: 152 MWVAPPLHHHSQQTK 108
MW+ P H HS QTK
Sbjct: 922 MWLHPKSHEHSSQTK 936
>03_02_0464 - 8683232-8684596
Length = 454
Score = 25.8 bits (54), Expect = 6.3
Identities = 19/58 (32%), Positives = 25/58 (43%)
Frame = +2
Query: 116 AESDDEVEVLPTSDIASNILNEQVPKPVSSNYVNSTISNPTFDVNLQPLSEPSSXHTP 289
AE +DE S + + + SS+ V ST S+P L PLS S TP
Sbjct: 121 AEEEDEAVTTTVSSPLAQSSSCLPQRQASSSVVLSTPSSPCASPFLSPLSPQSLSITP 178
>11_06_0247 -
21669299-21669348,21669673-21670012,21670110-21670199,
21670280-21670339,21670564-21670856,21671176-21671245,
21671623-21671970,21673188-21673318,21673418-21673901,
21674839-21675558
Length = 861
Score = 25.4 bits (53), Expect = 8.3
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = +2
Query: 62 SSADNQQRNEEMECDALFAESDDEVEVLPTSDIASNILNEQVPKPVSSNYVN 217
S D+ + ++ E D E+DDE +V PT+ + S NYV+
Sbjct: 772 SDEDDDEDDDNDEEDGFDYENDDEDDVPPTTSDGDLYNHTDFGSSDSENYVS 823
>10_08_0761 - 20396987-20397925
Length = 312
Score = 25.4 bits (53), Expect = 8.3
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = -3
Query: 143 APPLHHHSQQTKHHTP 96
APP H H +HH P
Sbjct: 166 APPSHSHHHHQRHHPP 181
>10_03_0041 +
7314749-7315012,7315111-7316157,7317592-7317681,
7318291-7318332
Length = 480
Score = 25.4 bits (53), Expect = 8.3
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +2
Query: 134 VEVLPTSDIASNILNEQVPKPVSSNYVNSTISNPTFDVNLQP 259
V+V T+DI S VS Y ++ IS TF V LQP
Sbjct: 342 VQVGETADILSGGKLRSTLHAVSRPYGSTNISRETFVVFLQP 383
>06_03_0098 -
16621473-16621511,16621617-16621655,16621741-16622029,
16622112-16622282,16622361-16623244,16623332-16623775,
16623854-16624561
Length = 857
Score = 25.4 bits (53), Expect = 8.3
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +2
Query: 104 DALFAESDDEVEVLPTSDIASNILNEQVPKPVSSNYVNSTISNPTFD 244
D L++ D E + + A IL PK + +Y+NS I T+D
Sbjct: 718 DTLWSRRDKEYIMCAYNQYAHWILLVITPKWSTCHYLNSRIDKNTYD 764
>05_01_0431 +
3412178-3412336,3413012-3413109,3413185-3413312,
3413770-3413881,3414309-3414489,3414714-3414896,
3415133-3415315,3416062-3416131,3416413-3416522,
3416604-3416908,3417079-3417175,3417622-3417765,
3418217-3418303,3418387-3418473,3418566-3418706,
3418805-3418930,3419166-3419264,3419690-3419757,
3420275-3420341,3420713-3420883,3420959-3421048,
3421831-3421911,3423397-3423470,3423784-3423855,
3423925-3424017,3424138-3424204
Length = 1030
Score = 25.4 bits (53), Expect = 8.3
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +3
Query: 24 RRLWVLFWILPSH 62
+ LW L W++PSH
Sbjct: 542 KALWELLWVIPSH 554
>04_04_1478 -
33882625-33883639,33883725-33883849,33883935-33884144,
33884645-33884650
Length = 451
Score = 25.4 bits (53), Expect = 8.3
Identities = 6/14 (42%), Positives = 12/14 (85%)
Frame = +3
Query: 126 MMKWRCYPHLILHQ 167
+++W+C PH++L Q
Sbjct: 64 LIRWKCPPHIVLEQ 77
>04_04_0254 -
23951495-23951902,23952000-23952155,23952344-23952485,
23952772-23953160,23953833-23953948,23954290-23954371
Length = 430
Score = 25.4 bits (53), Expect = 8.3
Identities = 12/42 (28%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Frame = +3
Query: 51 LPSHLVLTINR--EMKKWSVMLCLLRVMMK-WRCYPHLILHQ 167
LP ++ I+ M++ + C+ R ++ WRC+P+LI ++
Sbjct: 64 LPEDILSRIHSFMSMREAARAACVSRAFLRSWRCHPNLIFNK 105
>04_03_0594 -
17733827-17735085,17735576-17735642,17736379-17736413,
17736810-17737665
Length = 738
Score = 25.4 bits (53), Expect = 8.3
Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Frame = -2
Query: 294 GTGVCXDEGSES--GCKLTSNVGFEIVEFT*LDDTGLGTCSLSI 169
G G D GS GC T +G ++V +G+G C +I
Sbjct: 123 GPGEQNDVGSNLTIGCAATCGIGDDLVSINSAGCSGIGCCQTNI 166
>03_04_0228 -
18989688-18989807,18990300-18990345,18990452-18990552,
18990624-18990702,18990788-18990868,18991440-18991502,
18994171-18994246,18994980-18995246,18995994-18996076,
18996792-18996922,18997043-18997174
Length = 392
Score = 25.4 bits (53), Expect = 8.3
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +2
Query: 53 AFTSSADNQQRNEEMECDALFAESDDEVE-VLPTSDIASNILNEQVPKPVSSNYVNSTIS 229
A SS ++ + E DA+F S +EVE L S+ + + + + K SS ++ S
Sbjct: 325 AVASSYTYEEGEKSHEPDAIFIRSVNEVEKTLQVSNCPTFLNSLKRLKHGSSTFLASEPG 384
Query: 230 NPTFDV 247
TFD+
Sbjct: 385 GVTFDL 390
>03_02_0367 +
7834072-7834479,7834555-7834779,7834858-7835082,
7835333-7836219,7836298-7836468,7836551-7836839,
7836925-7836963,7837069-7837107
Length = 760
Score = 25.4 bits (53), Expect = 8.3
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +2
Query: 104 DALFAESDDEVEVLPTSDIASNILNEQVPKPVSSNYVNSTISNPTFD 244
D L++ D E + + A IL PK + +Y+NS I T+D
Sbjct: 621 DTLWSRQDKEYIMCAYNQYAHWILLIIAPKWSTCHYLNSRIDKNTYD 667
>02_03_0396 - 18568908-18569032,18569157-18569262
Length = 76
Score = 25.4 bits (53), Expect = 8.3
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +2
Query: 2 SSWDVPGPSSLGAILDTAFTSSADNQQRNEEMECDAL 112
S W + LG +LD A + N +N E + D L
Sbjct: 11 SLWAIRYKGCLGELLDVAASPKLSNASQNLEQKLDCL 47
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,207,830
Number of Sequences: 37544
Number of extensions: 152093
Number of successful extensions: 621
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 595
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 615
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 339576272
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -