BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte4i03
(622 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY051800-1|AAK93224.1| 354|Drosophila melanogaster LD31571p pro... 127 1e-29
AE014297-728|AAF54214.2| 354|Drosophila melanogaster CG7494-PA ... 127 1e-29
DQ162845-1|ABA42953.1| 1715|Drosophila melanogaster TRF2 protein. 31 0.95
BT029116-1|ABJ17049.1| 702|Drosophila melanogaster IP15292p pro... 31 1.7
AE014297-3425|AAS65202.1| 909|Drosophila melanogaster CG31140-P... 31 1.7
AE014297-3424|AAS65201.1| 1055|Drosophila melanogaster CG31140-P... 31 1.7
AE014297-3423|AAF56214.2| 1564|Drosophila melanogaster CG31140-P... 31 1.7
BT030107-1|ABN49246.1| 635|Drosophila melanogaster GH13974p pro... 29 5.1
M16152-1|AAB59220.1| 2703|Drosophila melanogaster Notch growth f... 29 6.7
K03508-1|AAA28725.1| 2703|Drosophila melanogaster developmental ... 29 6.7
AL035436-2|CAB37610.1| 2704|Drosophila melanogaster EG:140G11.1,... 29 6.7
AE014298-493|AAF45848.2| 2703|Drosophila melanogaster CG3936-PA ... 29 6.7
AY128463-1|AAM75056.1| 817|Drosophila melanogaster RE18773p pro... 28 8.9
AY070849-1|AAL48471.1| 665|Drosophila melanogaster GM02933p pro... 28 8.9
AE014297-2|AAN13329.1| 665|Drosophila melanogaster CG12581-PB, ... 28 8.9
AE014297-1|AAF52174.2| 665|Drosophila melanogaster CG12581-PA, ... 28 8.9
AE014296-1378|AAF50482.1| 1417|Drosophila melanogaster CG7504-PA... 28 8.9
AE014296-277|AAS64930.1| 817|Drosophila melanogaster CG7852-PC,... 28 8.9
>AY051800-1|AAK93224.1| 354|Drosophila melanogaster LD31571p
protein.
Length = 354
Score = 127 bits (306), Expect = 1e-29
Identities = 52/107 (48%), Positives = 76/107 (71%)
Frame = +1
Query: 295 IQVEVTKVGFIPHNQRGRKVVKTVVNKHFSDEHKAIPIDDVYPMKYYKWVVYTAEDAVKA 474
++VEV KVGFIPHNQR +K+ +KH D K +P DD Y +YY+W VY+ ++A++
Sbjct: 46 VKVEVKKVGFIPHNQRNKKINVKRADKHVDDSWKQVPKDDCYVGRYYRWPVYSVQEAIQC 105
Query: 475 HQETHHPTMFNAPDAFIFAKIEFNMTGIKQTRFMDSFTRLSLLPHPF 615
H+ETHHP+M+N P+A + IE NM K TRF+D+F R++++PH F
Sbjct: 106 HRETHHPSMYNVPNAPLNLDIELNMQAEKITRFVDNFQRMAMIPHKF 152
>AE014297-728|AAF54214.2| 354|Drosophila melanogaster CG7494-PA
protein.
Length = 354
Score = 127 bits (306), Expect = 1e-29
Identities = 52/107 (48%), Positives = 76/107 (71%)
Frame = +1
Query: 295 IQVEVTKVGFIPHNQRGRKVVKTVVNKHFSDEHKAIPIDDVYPMKYYKWVVYTAEDAVKA 474
++VEV KVGFIPHNQR +K+ +KH D K +P DD Y +YY+W VY+ ++A++
Sbjct: 46 VKVEVKKVGFIPHNQRNKKINVKRADKHVDDSWKQVPKDDCYVGRYYRWPVYSVQEAIQC 105
Query: 475 HQETHHPTMFNAPDAFIFAKIEFNMTGIKQTRFMDSFTRLSLLPHPF 615
H+ETHHP+M+N P+A + IE NM K TRF+D+F R++++PH F
Sbjct: 106 HRETHHPSMYNVPNAPLNLDIELNMQAEKITRFVDNFQRMAMIPHKF 152
>DQ162845-1|ABA42953.1| 1715|Drosophila melanogaster TRF2 protein.
Length = 1715
Score = 31.5 bits (68), Expect = 0.95
Identities = 17/57 (29%), Positives = 35/57 (61%)
Frame = +2
Query: 194 LQPTKILQLLDP*TQERYSTQPEKVQELRHVQKKFKLKSQKLVSFRTIKEGER*LKQ 364
LQ K+LQ QE+ Q +++Q+ + +Q++ +L+ QKL+ + + + E+ L+Q
Sbjct: 877 LQQEKLLQQEKRLQQEKRLQQEKRLQQEKRLQQEKRLQQQKLLQQQKLLQQEKLLQQ 933
>BT029116-1|ABJ17049.1| 702|Drosophila melanogaster IP15292p
protein.
Length = 702
Score = 30.7 bits (66), Expect = 1.7
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = +1
Query: 316 VGFIPHNQRGRKVVKTVVNKHFSDEHKAIPIDDVYPMKYYKWVVYTAEDAVKA 474
VG +P R + ++NK+ +DE+K I I +Y Y VV T ED++KA
Sbjct: 201 VGNLPTGLSQRNY-EQILNKYVTDENKFISIGPIY--YEYGSVVLTFEDSMKA 250
>AE014297-3425|AAS65202.1| 909|Drosophila melanogaster CG31140-PC,
isoform C protein.
Length = 909
Score = 30.7 bits (66), Expect = 1.7
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = +1
Query: 316 VGFIPHNQRGRKVVKTVVNKHFSDEHKAIPIDDVYPMKYYKWVVYTAEDAVKA 474
VG +P R + ++NK+ +DE+K I I +Y Y VV T ED++KA
Sbjct: 431 VGNLPTGLSQRNY-EQILNKYVTDENKFISIGPIY--YEYGSVVLTFEDSMKA 480
>AE014297-3424|AAS65201.1| 1055|Drosophila melanogaster CG31140-PB,
isoform B protein.
Length = 1055
Score = 30.7 bits (66), Expect = 1.7
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = +1
Query: 316 VGFIPHNQRGRKVVKTVVNKHFSDEHKAIPIDDVYPMKYYKWVVYTAEDAVKA 474
VG +P R + ++NK+ +DE+K I I +Y Y VV T ED++KA
Sbjct: 525 VGNLPTGLSQRNY-EQILNKYVTDENKFISIGPIY--YEYGSVVLTFEDSMKA 574
>AE014297-3423|AAF56214.2| 1564|Drosophila melanogaster CG31140-PA,
isoform A protein.
Length = 1564
Score = 30.7 bits (66), Expect = 1.7
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = +1
Query: 316 VGFIPHNQRGRKVVKTVVNKHFSDEHKAIPIDDVYPMKYYKWVVYTAEDAVKA 474
VG +P R + ++NK+ +DE+K I I +Y Y VV T ED++KA
Sbjct: 1034 VGNLPTGLSQRNY-EQILNKYVTDENKFISIGPIY--YEYGSVVLTFEDSMKA 1083
>BT030107-1|ABN49246.1| 635|Drosophila melanogaster GH13974p
protein.
Length = 635
Score = 29.1 bits (62), Expect = 5.1
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +3
Query: 399 DTHRRCVSYEVLQMGGLHG*GCSQSPPGDPPP 494
D+ RRC+SY+ LQM S PP PPP
Sbjct: 484 DSIRRCISYQFLQM--------SNRPPPPPPP 507
>M16152-1|AAB59220.1| 2703|Drosophila melanogaster Notch growth factor
protein.
Length = 2703
Score = 28.7 bits (61), Expect = 6.7
Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 4/70 (5%)
Frame = -2
Query: 387 ITEMLVHHCFNYLSPSLIVRNETNFCDFNLNFF-C-TCLSSCTFSGCVEYRSCVYGSN-- 220
I E L C N + S V + T C + C T CT S C+ SC+ G N
Sbjct: 985 INECLSQPCQNGATCSQYVNSYTCTCPLGFSGINCQTNDEDCTESSCLNGGSCIDGINGY 1044
Query: 219 SCNIFVG*SG 190
+C+ G SG
Sbjct: 1045 NCSCLAGYSG 1054
>K03508-1|AAA28725.1| 2703|Drosophila melanogaster developmental
protein protein.
Length = 2703
Score = 28.7 bits (61), Expect = 6.7
Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 4/70 (5%)
Frame = -2
Query: 387 ITEMLVHHCFNYLSPSLIVRNETNFCDFNLNFF-C-TCLSSCTFSGCVEYRSCVYGSN-- 220
I E L C N + S V + T C + C T CT S C+ SC+ G N
Sbjct: 985 INECLSQPCQNGATCSQYVNSYTCTCPLGFSGINCQTNDEDCTESSCLNGGSCIDGINGY 1044
Query: 219 SCNIFVG*SG 190
+C+ G SG
Sbjct: 1045 NCSCLAGYSG 1054
>AL035436-2|CAB37610.1| 2704|Drosophila melanogaster
EG:140G11.1,FBgn0004647;N protein.
Length = 2704
Score = 28.7 bits (61), Expect = 6.7
Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 4/70 (5%)
Frame = -2
Query: 387 ITEMLVHHCFNYLSPSLIVRNETNFCDFNLNFF-C-TCLSSCTFSGCVEYRSCVYGSN-- 220
I E L C N + S V + T C + C T CT S C+ SC+ G N
Sbjct: 985 INECLSQPCQNGATCSQYVNSYTCTCPLGFSGINCQTNDEDCTESSCLNGGSCIDGINGY 1044
Query: 219 SCNIFVG*SG 190
+C+ G SG
Sbjct: 1045 NCSCLAGYSG 1054
>AE014298-493|AAF45848.2| 2703|Drosophila melanogaster CG3936-PA
protein.
Length = 2703
Score = 28.7 bits (61), Expect = 6.7
Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 4/70 (5%)
Frame = -2
Query: 387 ITEMLVHHCFNYLSPSLIVRNETNFCDFNLNFF-C-TCLSSCTFSGCVEYRSCVYGSN-- 220
I E L C N + S V + T C + C T CT S C+ SC+ G N
Sbjct: 985 INECLSQPCQNGATCSQYVNSYTCTCPLGFSGINCQTNDEDCTESSCLNGGSCIDGINGY 1044
Query: 219 SCNIFVG*SG 190
+C+ G SG
Sbjct: 1045 NCSCLAGYSG 1054
>AY128463-1|AAM75056.1| 817|Drosophila melanogaster RE18773p
protein.
Length = 817
Score = 28.3 bits (60), Expect = 8.9
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 420 SYEVLQMGGLHG*GCSQSPPGDPPPDH 500
S+ +L+ G L+ S SPP PPP H
Sbjct: 778 SFPLLEKGVLNQECASSSPPAPPPPGH 804
>AY070849-1|AAL48471.1| 665|Drosophila melanogaster GM02933p
protein.
Length = 665
Score = 28.3 bits (60), Expect = 8.9
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +3
Query: 441 GGLHG*GCSQSPPGDPPPDH 500
GGLHG G SQ P PP H
Sbjct: 629 GGLHGPGPSQHPHAHPPHPH 648
>AE014297-2|AAN13329.1| 665|Drosophila melanogaster CG12581-PB,
isoform B protein.
Length = 665
Score = 28.3 bits (60), Expect = 8.9
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +3
Query: 441 GGLHG*GCSQSPPGDPPPDH 500
GGLHG G SQ P PP H
Sbjct: 629 GGLHGPGPSQHPHAHPPHPH 648
>AE014297-1|AAF52174.2| 665|Drosophila melanogaster CG12581-PA,
isoform A protein.
Length = 665
Score = 28.3 bits (60), Expect = 8.9
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +3
Query: 441 GGLHG*GCSQSPPGDPPPDH 500
GGLHG G SQ P PP H
Sbjct: 629 GGLHGPGPSQHPHAHPPHPH 648
>AE014296-1378|AAF50482.1| 1417|Drosophila melanogaster CG7504-PA
protein.
Length = 1417
Score = 28.3 bits (60), Expect = 8.9
Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
Frame = -2
Query: 357 NYLSPSLIVRNE---TNFCDFNLNFFCTCLSSC 268
N LSP L R E ++ C N CT LSSC
Sbjct: 1084 NQLSPPLTQREEFEISHMCVTRANIICTTLSSC 1116
>AE014296-277|AAS64930.1| 817|Drosophila melanogaster CG7852-PC,
isoform C protein.
Length = 817
Score = 28.3 bits (60), Expect = 8.9
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 420 SYEVLQMGGLHG*GCSQSPPGDPPPDH 500
S+ +L+ G L+ S SPP PPP H
Sbjct: 778 SFPLLEKGVLNQECASSSPPAPPPPGH 804
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,722,079
Number of Sequences: 53049
Number of extensions: 577386
Number of successful extensions: 1401
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1374
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1401
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2559155400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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