Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4i03
         (622 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF036702-8|AAR85905.1|  377|Caenorhabditis elegans Hypothetical ...    55   5e-08
Z69884-4|CAA93751.2|  913|Caenorhabditis elegans Hypothetical pr...    29   2.0  
Z36752-3|CAA85325.1|  422|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z81046-5|CAB02823.1|  225|Caenorhabditis elegans Hypothetical pr...    28   4.7  
Z96048-6|CAE17841.1|  327|Caenorhabditis elegans Hypothetical pr...    28   6.2  
Z81132-15|CAE17969.1|  327|Caenorhabditis elegans Hypothetical p...    28   6.2  
Z81132-12|CAE17968.1|  326|Caenorhabditis elegans Hypothetical p...    28   6.2  

>AF036702-8|AAR85905.1|  377|Caenorhabditis elegans Hypothetical
           protein F33D4.5 protein.
          Length = 377

 Score = 54.8 bits (126), Expect = 5e-08
 Identities = 24/71 (33%), Positives = 41/71 (57%)
 Frame = +1

Query: 403 PIDDVYPMKYYKWVVYTAEDAVKAHQETHHPTMFNAPDAFIFAKIEFNMTGIKQTRFMDS 582
           P  DV+   ++K   YT  +A+  H+E   P+++N P+A I  ++E NMT  +QT+ +  
Sbjct: 97  PTLDVFIKSHFKTQYYTVSEALDMHRELQSPSIYNNPNAPIRLRLELNMTTERQTKMVTG 156

Query: 583 FTRLSLLPHPF 615
              +  +PHPF
Sbjct: 157 SDEIVPVPHPF 167


>Z69884-4|CAA93751.2|  913|Caenorhabditis elegans Hypothetical
           protein F31F6.5 protein.
          Length = 913

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 12/49 (24%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
 Frame = -2

Query: 459 LSRVDHPFVILHRIHIVDGYRFVLITEMLVHHCFNY---LSPSLIVRNE 322
           + ++  PF++ + + I  G  FV+   + ++ C+N+   L+P  +V N+
Sbjct: 533 IGKIYGPFILSNSVRIFSGLIFVVYLAIAMYGCYNFREGLNPGNLVTND 581


>Z36752-3|CAA85325.1|  422|Caenorhabditis elegans Hypothetical
           protein F35H8.3 protein.
          Length = 422

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +1

Query: 448 YTAEDAVKAHQETHHPTMFNA 510
           +T EDA++ HQ T HP  F++
Sbjct: 264 FTTEDALRHHQSTAHPATFDS 284


>Z81046-5|CAB02823.1|  225|Caenorhabditis elegans Hypothetical
           protein C37E2.2a protein.
          Length = 225

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = -1

Query: 160 QPWLSR-FYLYDFRFIYSFNFVLCIFY 83
           QP L   +Y+Y    + + NFVLC+FY
Sbjct: 27  QPRLGHHWYVYKLVMLTNLNFVLCVFY 53


>Z96048-6|CAE17841.1|  327|Caenorhabditis elegans Hypothetical
           protein F57A10.6 protein.
          Length = 327

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 12/44 (27%), Positives = 20/44 (45%)
 Frame = +1

Query: 412 DVYPMKYYKWVVYTAEDAVKAHQETHHPTMFNAPDAFIFAKIEF 543
           D +PM   +W+  T   ++   ++ +H  M NA D     K  F
Sbjct: 131 DDFPMNLGEWIFITGLTSLNYLKKFNHVNMLNASDRHFLLKYSF 174


>Z81132-15|CAE17969.1|  327|Caenorhabditis elegans Hypothetical
           protein F57A10.6 protein.
          Length = 327

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 12/44 (27%), Positives = 20/44 (45%)
 Frame = +1

Query: 412 DVYPMKYYKWVVYTAEDAVKAHQETHHPTMFNAPDAFIFAKIEF 543
           D +PM   +W+  T   ++   ++ +H  M NA D     K  F
Sbjct: 131 DDFPMNLGEWIFITGLTSLNYLKKFNHVNMLNASDRHFLLKYSF 174


>Z81132-12|CAE17968.1|  326|Caenorhabditis elegans Hypothetical
           protein T26E4.16 protein.
          Length = 326

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 12/44 (27%), Positives = 20/44 (45%)
 Frame = +1

Query: 412 DVYPMKYYKWVVYTAEDAVKAHQETHHPTMFNAPDAFIFAKIEF 543
           D +PM   +W+  T   ++   ++ +H  M NA D     K  F
Sbjct: 131 DGFPMNLGEWIFITGLTSLNYLKKFNHVNMLNASDRHFLLKYSF 174


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,944,293
Number of Sequences: 27780
Number of extensions: 305546
Number of successful extensions: 819
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 816
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)