Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4i03
         (622 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    21   7.3  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    21   7.3  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   9.7  

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = +1

Query: 334 NQRGRKVVKTVVNKHFSDEHKAIPIDDVYPMKY 432
           NQ  +K ++  +N      +K +  DD+  M+Y
Sbjct: 323 NQDVQKKLREEINTFCPKNNKELKYDDIKEMEY 355


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 349 KVVKTVVNKHFSDEHK 396
           KV+  +V  H SD+HK
Sbjct: 113 KVILDLVPNHTSDQHK 128


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 10/25 (40%), Positives = 11/25 (44%)
 Frame = -2

Query: 309 DFNLNFFCTCLSSCTFSGCVEYRSC 235
           + NLN    C SS   SG V    C
Sbjct: 149 NLNLNGTVNCTSSIASSGVVSAGEC 173


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,719
Number of Sequences: 438
Number of extensions: 3914
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18460203
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)