Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte4h22
(712 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S57284-1|AAB25906.1| 437|Caenorhabditis elegans S-adenosylhomoc... 316 1e-86
M64306-1|AAA28062.1| 437|Caenorhabditis elegans S-adenosylhomoc... 316 1e-86
AF043699-5|AAB97565.1| 437|Caenorhabditis elegans Hypothetical ... 316 1e-86
AC006659-2|AAF39883.2| 977|Caenorhabditis elegans Hypothetical ... 29 2.5
U50199-6|AAA91266.1| 470|Caenorhabditis elegans Vacuolar h atpa... 29 3.3
AF125959-3|AAD14731.1| 531|Caenorhabditis elegans Udp-glucurono... 28 5.7
Z50070-3|CAA90400.1| 134|Caenorhabditis elegans Hypothetical pr... 28 7.6
>S57284-1|AAB25906.1| 437|Caenorhabditis elegans
S-adenosylhomocysteine hydrolase protein.
Length = 437
Score = 316 bits (776), Expect = 1e-86
Identities = 146/194 (75%), Positives = 167/194 (86%)
Frame = +2
Query: 128 Y*ISDEKLAEWGRKEIMLAEKEMPGLMACRRKYAPAKILKGARIAGSLHMTVQTAVLIET 307
Y ++D KLA++GRKEI+LAE EMPGLMA R KY P++ LKGARIAG LHMT+QTAVLIET
Sbjct: 8 YKVADIKLADFGRKEIILAENEMPGLMAMRSKYGPSQPLKGARIAGCLHMTIQTAVLIET 67
Query: 308 LIELGAEVQWSSSNIYSTQDEAAAALVAVGIPIYAWKGETDDEYIWCIEQTLIFPDGKPL 487
L LGAEVQWSS NI+STQD AAAA+ G+P+YAWKGETD+EY WCIEQT++F DG+PL
Sbjct: 68 LTALGAEVQWSSCNIFSTQDHAAAAIAQTGVPVYAWKGETDEEYEWCIEQTIVFKDGQPL 127
Query: 488 NMILDDGGDLTNLVHTKYPDLLKDVKGITEETTTGVHNLYKMFREGLLKVPAINVNDSVT 667
NMILDDGGDLTNLVH KYP L ++G++EETTTGVHNL KM +G LKVPAINVNDSVT
Sbjct: 128 NMILDDGGDLTNLVHAKYPQYLAGIRGLSEETTTGVHNLAKMLAKGDLKVPAINVNDSVT 187
Query: 668 KSKFDNLYGCRESL 709
KSKFDNLYG RESL
Sbjct: 188 KSKFDNLYGIRESL 201
>M64306-1|AAA28062.1| 437|Caenorhabditis elegans
S-adenosylhomocysteine hydrolase protein.
Length = 437
Score = 316 bits (776), Expect = 1e-86
Identities = 146/194 (75%), Positives = 167/194 (86%)
Frame = +2
Query: 128 Y*ISDEKLAEWGRKEIMLAEKEMPGLMACRRKYAPAKILKGARIAGSLHMTVQTAVLIET 307
Y ++D KLA++GRKEI+LAE EMPGLMA R KY P++ LKGARIAG LHMT+QTAVLIET
Sbjct: 8 YKVADIKLADFGRKEIILAENEMPGLMAMRSKYGPSQPLKGARIAGCLHMTIQTAVLIET 67
Query: 308 LIELGAEVQWSSSNIYSTQDEAAAALVAVGIPIYAWKGETDDEYIWCIEQTLIFPDGKPL 487
L LGAEVQWSS NI+STQD AAAA+ G+P+YAWKGETD+EY WCIEQT++F DG+PL
Sbjct: 68 LTALGAEVQWSSCNIFSTQDHAAAAIAQTGVPVYAWKGETDEEYEWCIEQTIVFKDGQPL 127
Query: 488 NMILDDGGDLTNLVHTKYPDLLKDVKGITEETTTGVHNLYKMFREGLLKVPAINVNDSVT 667
NMILDDGGDLTNLVH KYP L ++G++EETTTGVHNL KM +G LKVPAINVNDSVT
Sbjct: 128 NMILDDGGDLTNLVHAKYPQYLAGIRGLSEETTTGVHNLAKMLAKGDLKVPAINVNDSVT 187
Query: 668 KSKFDNLYGCRESL 709
KSKFDNLYG RESL
Sbjct: 188 KSKFDNLYGIRESL 201
>AF043699-5|AAB97565.1| 437|Caenorhabditis elegans Hypothetical
protein K02F2.2 protein.
Length = 437
Score = 316 bits (776), Expect = 1e-86
Identities = 146/194 (75%), Positives = 167/194 (86%)
Frame = +2
Query: 128 Y*ISDEKLAEWGRKEIMLAEKEMPGLMACRRKYAPAKILKGARIAGSLHMTVQTAVLIET 307
Y ++D KLA++GRKEI+LAE EMPGLMA R KY P++ LKGARIAG LHMT+QTAVLIET
Sbjct: 8 YKVADIKLADFGRKEIILAENEMPGLMAMRSKYGPSQPLKGARIAGCLHMTIQTAVLIET 67
Query: 308 LIELGAEVQWSSSNIYSTQDEAAAALVAVGIPIYAWKGETDDEYIWCIEQTLIFPDGKPL 487
L LGAEVQWSS NI+STQD AAAA+ G+P+YAWKGETD+EY WCIEQT++F DG+PL
Sbjct: 68 LTALGAEVQWSSCNIFSTQDHAAAAIAQTGVPVYAWKGETDEEYEWCIEQTIVFKDGQPL 127
Query: 488 NMILDDGGDLTNLVHTKYPDLLKDVKGITEETTTGVHNLYKMFREGLLKVPAINVNDSVT 667
NMILDDGGDLTNLVH KYP L ++G++EETTTGVHNL KM +G LKVPAINVNDSVT
Sbjct: 128 NMILDDGGDLTNLVHAKYPQYLAGIRGLSEETTTGVHNLAKMLAKGDLKVPAINVNDSVT 187
Query: 668 KSKFDNLYGCRESL 709
KSKFDNLYG RESL
Sbjct: 188 KSKFDNLYGIRESL 201
>AC006659-2|AAF39883.2| 977|Caenorhabditis elegans Hypothetical
protein H16O14.1 protein.
Length = 977
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = -1
Query: 382 CSCGLVLCTI-NVTAGPLYLCSQFY*SLNKNRCLYCHV*AAGYSGTFEYFSWSI 224
C CG+++ I N+TA Y +N L + + G+ F YF WS+
Sbjct: 442 CECGILIAVIENITALITQFFLMCYLGVNAACALQSLLKSPGWRPGFRYFHWSL 495
>U50199-6|AAA91266.1| 470|Caenorhabditis elegans Vacuolar h atpase
protein 15 protein.
Length = 470
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +2
Query: 542 PDLLKDVKGITEETTTGVHNL 604
PDL DVK +TEE T VH+L
Sbjct: 316 PDLEDDVKFLTEELTLSVHDL 336
>AF125959-3|AAD14731.1| 531|Caenorhabditis elegans
Udp-glucuronosyltransferase protein14 protein.
Length = 531
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 608 KMFREGLLKVPAINVNDSVTKSKFDNLYGCRESL 709
+M+ LLK+P+I + SV F+N +G SL
Sbjct: 154 EMYLAHLLKIPSIPIKSSVRYPAFNNAFGQPSSL 187
>Z50070-3|CAA90400.1| 134|Caenorhabditis elegans Hypothetical
protein F43G6.2 protein.
Length = 134
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
Frame = -1
Query: 220 PTTCHKA---WHFFLC*HNFFSAPFSQFLVRN 134
P H+A +HF C HN +P S F VRN
Sbjct: 4 PIHSHRAATLYHFAFCLHNLRRSPNSPFTVRN 35
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,500,229
Number of Sequences: 27780
Number of extensions: 360153
Number of successful extensions: 885
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 885
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1655655746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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