Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4h08
         (752 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M81796-1|AAA28736.1|  974|Drosophila melanogaster optomotor-blin...    29   6.8  
BT021351-1|AAX33499.1|  293|Drosophila melanogaster LP18486p pro...    29   6.8  
AE014298-1184|ABC67178.1|  293|Drosophila melanogaster CG33962-P...    29   6.8  
AE014298-631|AAF45946.2|  972|Drosophila melanogaster CG3578-PA ...    29   6.8  

>M81796-1|AAA28736.1|  974|Drosophila melanogaster optomotor-blind
           protein.
          Length = 974

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 13/51 (25%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
 Frame = -1

Query: 575 QLKYHITQSSRITFIPFSKTWDFLFKK---VFILTYQKTFIIKLKVRSKPW 432
           Q ++H+ +++ I  +P+S    ++FK+   + +  YQ   I +LK+ + P+
Sbjct: 457 QPRFHLVRANDILKLPYSTFRTYVFKETEFIAVTAYQNEKITQLKIDNNPF 507


>BT021351-1|AAX33499.1|  293|Drosophila melanogaster LP18486p
           protein.
          Length = 293

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 16/55 (29%), Positives = 27/55 (49%)
 Frame = +3

Query: 483 EDENFLEEKVPSLAKWNESDPRALSNVIFELVNLYKSHQIRKLSEDDSSRAYFEY 647
           E+E   EE+    +  +E  P+     +  +   YK+ + RK+S   SS AY +Y
Sbjct: 197 EEEYAEEEQEQEQSSDDEEAPQLTYKQLGYITEQYKNPKFRKISSSSSSYAYKDY 251


>AE014298-1184|ABC67178.1|  293|Drosophila melanogaster CG33962-PA
           protein.
          Length = 293

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 16/55 (29%), Positives = 27/55 (49%)
 Frame = +3

Query: 483 EDENFLEEKVPSLAKWNESDPRALSNVIFELVNLYKSHQIRKLSEDDSSRAYFEY 647
           E+E   EE+    +  +E  P+     +  +   YK+ + RK+S   SS AY +Y
Sbjct: 197 EEEYAEEEQEQEQSSDDEEAPQLTYKQLGYITEQYKNPKFRKISSSSSSYAYKDY 251


>AE014298-631|AAF45946.2|  972|Drosophila melanogaster CG3578-PA
           protein.
          Length = 972

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 13/51 (25%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
 Frame = -1

Query: 575 QLKYHITQSSRITFIPFSKTWDFLFKK---VFILTYQKTFIIKLKVRSKPW 432
           Q ++H+ +++ I  +P+S    ++FK+   + +  YQ   I +LK+ + P+
Sbjct: 457 QPRFHLVRANDILKLPYSTFRTYVFKETEFIAVTAYQNEKITQLKIDNNPF 507


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,874,517
Number of Sequences: 53049
Number of extensions: 610095
Number of successful extensions: 1222
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1222
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3437745267
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)