SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4h06
         (663 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y14486-1|CAB54839.1|  310|Homo sapiens cytosolic serine hydroxym...   251   1e-66
Y14485-1|CAB54838.1|  483|Homo sapiens cytosolic serine hydroxym...   251   1e-66
L23928-1|AAA36020.1|  483|Homo sapiens serine hydroxymethyltrans...   251   1e-66
L11931-1|AAA63257.1|  483|Homo sapiens serine hydroxymethyltrans...   251   1e-66
BC038598-1|AAH38598.1|  483|Homo sapiens serine hydroxymethyltra...   251   1e-66
BC007979-1|AAH07979.1|  483|Homo sapiens serine hydroxymethyltra...   251   1e-66
AK223552-1|BAD97272.1|  483|Homo sapiens serine hydroxymethyltra...   251   1e-66
L11932-1|AAA63258.1|  474|Homo sapiens serine hydroxymethyltrans...   243   5e-64
U23143-1|AAA64572.1|  483|Homo sapiens mitochondrial serine hydr...   241   2e-63
BT006866-1|AAP35512.1|  504|Homo sapiens serine hydroxymethyltra...   241   2e-63
BC091501-1|AAH91501.1|  480|Homo sapiens SHMT2 protein protein.       241   2e-63
BC044211-1|AAH44211.1|  504|Homo sapiens serine hydroxymethyltra...   241   2e-63
BC032584-1|AAH32584.1|  494|Homo sapiens SHMT2 protein protein.       241   2e-63
BC013677-1|AAH13677.1|  504|Homo sapiens serine hydroxymethyltra...   241   2e-63
BC011911-1|AAH11911.1|  504|Homo sapiens serine hydroxymethyltra...   241   2e-63
AK223555-1|BAD97275.1|  504|Homo sapiens serine hydroxymethyltra...   240   4e-63
L23928-2|AAA36018.1|  444|Homo sapiens serine hydroxymethyltrans...   142   1e-33
BC022874-1|AAH22874.1|  444|Homo sapiens serine hydroxymethyltra...   142   1e-33
Y14487-1|CAB54840.1|  347|Homo sapiens cytosolic serine hydroxym...   136   9e-32
L23928-3|AAA36019.1|  403|Homo sapiens serine hydroxymethyltrans...   116   1e-25
Y14489-1|CAB54842.1|   92|Homo sapiens cytosolic serine hydroxym...    59   1e-08
AK126938-1|BAC86756.1|  145|Homo sapiens protein ( Homo sapiens ...    34   0.52 
AF143946-1|AAD39760.1| 2971|Homo sapiens transcriptional activat...    34   0.52 
AK128030-1|BAC87237.1| 2427|Homo sapiens protein ( Homo sapiens ...    33   0.69 
AK126463-1|BAC86558.1|  559|Homo sapiens protein ( Homo sapiens ...    33   0.69 
AB002307-1|BAA20768.2| 3053|Homo sapiens KIAA0309 protein.             33   0.69 
AF283408-1|AAL38109.1| 1537|Homo sapiens candidate tumor suppres...    33   1.2  
AF176832-1|AAF70379.1| 4599|Homo sapiens low density lipoprotein...    33   1.2  
AC068195-1|AAX93243.1| 1126|Homo sapiens unknown protein.              33   1.2  
AB209707-1|BAD92944.1| 1720|Homo sapiens low density lipoprotein...    33   1.2  
L14837-1|AAA02891.1| 1736|Homo sapiens tight junction (zonula oc...    31   4.9  
DQ015919-1|AAY22179.1| 1748|Homo sapiens tight junction protein ...    31   4.9  
BC111712-1|AAI11713.1| 1748|Homo sapiens tight junction protein ...    31   4.9  

>Y14486-1|CAB54839.1|  310|Homo sapiens cytosolic serine
           hydroxymethyltransferase protein.
          Length = 310

 Score =  251 bits (615), Expect = 1e-66
 Identities = 122/207 (58%), Positives = 147/207 (71%), Gaps = 1/207 (0%)
 Frame = +2

Query: 2   VAAGVIPSPFEYCDIVTTTTHKTLRGPRAGVIFFRKGVRSVKAN-GQKVMYDLESKINQA 178
           VAAGV+PSPFE+C +VTTTTHKTLRG RAG+IF+RKGV+SV    G++++Y+LES IN A
Sbjct: 63  VAAGVVPSPFEHCHVVTTTTHKTLRGCRAGMIFYRKGVKSVDPKTGKEILYNLESLINSA 122

Query: 179 VFPGLQGGPHNHXXXXXXXXXXXXXXXEFVEYQKQVIKNAQRLCEGLISRGYSIATGGTD 358
           VFPGLQGGPHNH               EF  YQ QV+ N + L E L   GY I TGG+D
Sbjct: 123 VFPGLQGGPHNHAIAGVAVALKQAMTLEFKVYQHQVVANCRALSEALTELGYKIVTGGSD 182

Query: 359 VHLALVDLRGVGLRGAPAERVLELCSVACNKNTVPGDISALNPSGIRLGTPALTTRGLKE 538
            HL LVDLR  G  G  AE+VLE CS+ACNKNT PGD SAL PSG+RLGTPALT+RGL E
Sbjct: 183 NHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDRSALRPSGLRLGTPALTSRGLLE 242

Query: 539 ADIDKVVDFIDRALKIGLEIIKVSGLK 619
            D  KV  FI R +++ L+I   +G++
Sbjct: 243 KDFQKVAHFIHRGIELTLQIQSDTGVR 269


>Y14485-1|CAB54838.1|  483|Homo sapiens cytosolic serine
           hydroxymethyltransferase protein.
          Length = 483

 Score =  251 bits (615), Expect = 1e-66
 Identities = 122/207 (58%), Positives = 147/207 (71%), Gaps = 1/207 (0%)
 Frame = +2

Query: 2   VAAGVIPSPFEYCDIVTTTTHKTLRGPRAGVIFFRKGVRSVKAN-GQKVMYDLESKINQA 178
           VAAGV+PSPFE+C +VTTTTHKTLRG RAG+IF+RKGV+SV    G++++Y+LES IN A
Sbjct: 236 VAAGVVPSPFEHCHVVTTTTHKTLRGCRAGMIFYRKGVKSVDPKTGKEILYNLESLINSA 295

Query: 179 VFPGLQGGPHNHXXXXXXXXXXXXXXXEFVEYQKQVIKNAQRLCEGLISRGYSIATGGTD 358
           VFPGLQGGPHNH               EF  YQ QV+ N + L E L   GY I TGG+D
Sbjct: 296 VFPGLQGGPHNHAIAGVAVALKQAMTLEFKVYQHQVVANCRALSEALTELGYKIVTGGSD 355

Query: 359 VHLALVDLRGVGLRGAPAERVLELCSVACNKNTVPGDISALNPSGIRLGTPALTTRGLKE 538
            HL LVDLR  G  G  AE+VLE CS+ACNKNT PGD SAL PSG+RLGTPALT+RGL E
Sbjct: 356 NHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDRSALRPSGLRLGTPALTSRGLLE 415

Query: 539 ADIDKVVDFIDRALKIGLEIIKVSGLK 619
            D  KV  FI R +++ L+I   +G++
Sbjct: 416 KDFQKVAHFIHRGIELTLQIQSDTGVR 442


>L23928-1|AAA36020.1|  483|Homo sapiens serine
           hydroxymethyltransferase protein.
          Length = 483

 Score =  251 bits (615), Expect = 1e-66
 Identities = 122/207 (58%), Positives = 147/207 (71%), Gaps = 1/207 (0%)
 Frame = +2

Query: 2   VAAGVIPSPFEYCDIVTTTTHKTLRGPRAGVIFFRKGVRSVKAN-GQKVMYDLESKINQA 178
           VAAGV+PSPFE+C +VTTTTHKTLRG RAG+IF+RKGV+SV    G++++Y+LES IN A
Sbjct: 236 VAAGVVPSPFEHCHVVTTTTHKTLRGCRAGMIFYRKGVKSVDPKTGKEILYNLESLINSA 295

Query: 179 VFPGLQGGPHNHXXXXXXXXXXXXXXXEFVEYQKQVIKNAQRLCEGLISRGYSIATGGTD 358
           VFPGLQGGPHNH               EF  YQ QV+ N + L E L   GY I TGG+D
Sbjct: 296 VFPGLQGGPHNHAIAGVAVALKQAMTLEFKVYQHQVVANCRALSEALTELGYKIVTGGSD 355

Query: 359 VHLALVDLRGVGLRGAPAERVLELCSVACNKNTVPGDISALNPSGIRLGTPALTTRGLKE 538
            HL LVDLR  G  G  AE+VLE CS+ACNKNT PGD SAL PSG+RLGTPALT+RGL E
Sbjct: 356 NHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDRSALRPSGLRLGTPALTSRGLLE 415

Query: 539 ADIDKVVDFIDRALKIGLEIIKVSGLK 619
            D  KV  FI R +++ L+I   +G++
Sbjct: 416 KDFQKVAHFIHRGIELTLQIQSDTGVR 442


>L11931-1|AAA63257.1|  483|Homo sapiens serine
           hydroxymethyltransferase protein.
          Length = 483

 Score =  251 bits (615), Expect = 1e-66
 Identities = 122/207 (58%), Positives = 147/207 (71%), Gaps = 1/207 (0%)
 Frame = +2

Query: 2   VAAGVIPSPFEYCDIVTTTTHKTLRGPRAGVIFFRKGVRSVKAN-GQKVMYDLESKINQA 178
           VAAGV+PSPFE+C +VTTTTHKTLRG RAG+IF+RKGV+SV    G++++Y+LES IN A
Sbjct: 236 VAAGVVPSPFEHCHVVTTTTHKTLRGCRAGMIFYRKGVKSVDPKTGKEILYNLESLINSA 295

Query: 179 VFPGLQGGPHNHXXXXXXXXXXXXXXXEFVEYQKQVIKNAQRLCEGLISRGYSIATGGTD 358
           VFPGLQGGPHNH               EF  YQ QV+ N + L E L   GY I TGG+D
Sbjct: 296 VFPGLQGGPHNHAIAGVAVALKQAMTLEFKVYQHQVVANCRALSEALTELGYKIVTGGSD 355

Query: 359 VHLALVDLRGVGLRGAPAERVLELCSVACNKNTVPGDISALNPSGIRLGTPALTTRGLKE 538
            HL LVDLR  G  G  AE+VLE CS+ACNKNT PGD SAL PSG+RLGTPALT+RGL E
Sbjct: 356 NHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDRSALRPSGLRLGTPALTSRGLLE 415

Query: 539 ADIDKVVDFIDRALKIGLEIIKVSGLK 619
            D  KV  FI R +++ L+I   +G++
Sbjct: 416 KDFQKVAHFIHRGIELTLQIQSDTGVR 442


>BC038598-1|AAH38598.1|  483|Homo sapiens serine
           hydroxymethyltransferase 1 (soluble) protein.
          Length = 483

 Score =  251 bits (615), Expect = 1e-66
 Identities = 122/207 (58%), Positives = 147/207 (71%), Gaps = 1/207 (0%)
 Frame = +2

Query: 2   VAAGVIPSPFEYCDIVTTTTHKTLRGPRAGVIFFRKGVRSVKAN-GQKVMYDLESKINQA 178
           VAAGV+PSPFE+C +VTTTTHKTLRG RAG+IF+RKGV+SV    G++++Y+LES IN A
Sbjct: 236 VAAGVVPSPFEHCHVVTTTTHKTLRGCRAGMIFYRKGVKSVDPKTGKEILYNLESLINSA 295

Query: 179 VFPGLQGGPHNHXXXXXXXXXXXXXXXEFVEYQKQVIKNAQRLCEGLISRGYSIATGGTD 358
           VFPGLQGGPHNH               EF  YQ QV+ N + L E L   GY I TGG+D
Sbjct: 296 VFPGLQGGPHNHAIAGVAVALKQAMTLEFKVYQHQVVANCRALSEALTELGYKIVTGGSD 355

Query: 359 VHLALVDLRGVGLRGAPAERVLELCSVACNKNTVPGDISALNPSGIRLGTPALTTRGLKE 538
            HL LVDLR  G  G  AE+VLE CS+ACNKNT PGD SAL PSG+RLGTPALT+RGL E
Sbjct: 356 NHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDRSALRPSGLRLGTPALTSRGLLE 415

Query: 539 ADIDKVVDFIDRALKIGLEIIKVSGLK 619
            D  KV  FI R +++ L+I   +G++
Sbjct: 416 KDFQKVAHFIHRGIELTLQIQSDTGVR 442


>BC007979-1|AAH07979.1|  483|Homo sapiens serine
           hydroxymethyltransferase 1 (soluble) protein.
          Length = 483

 Score =  251 bits (615), Expect = 1e-66
 Identities = 122/207 (58%), Positives = 147/207 (71%), Gaps = 1/207 (0%)
 Frame = +2

Query: 2   VAAGVIPSPFEYCDIVTTTTHKTLRGPRAGVIFFRKGVRSVKAN-GQKVMYDLESKINQA 178
           VAAGV+PSPFE+C +VTTTTHKTLRG RAG+IF+RKGV+SV    G++++Y+LES IN A
Sbjct: 236 VAAGVVPSPFEHCHVVTTTTHKTLRGCRAGMIFYRKGVKSVDPKTGKEILYNLESLINSA 295

Query: 179 VFPGLQGGPHNHXXXXXXXXXXXXXXXEFVEYQKQVIKNAQRLCEGLISRGYSIATGGTD 358
           VFPGLQGGPHNH               EF  YQ QV+ N + L E L   GY I TGG+D
Sbjct: 296 VFPGLQGGPHNHAIAGVAVALKQAMTLEFKVYQHQVVANCRALSEALTELGYKIVTGGSD 355

Query: 359 VHLALVDLRGVGLRGAPAERVLELCSVACNKNTVPGDISALNPSGIRLGTPALTTRGLKE 538
            HL LVDLR  G  G  AE+VLE CS+ACNKNT PGD SAL PSG+RLGTPALT+RGL E
Sbjct: 356 NHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDRSALRPSGLRLGTPALTSRGLLE 415

Query: 539 ADIDKVVDFIDRALKIGLEIIKVSGLK 619
            D  KV  FI R +++ L+I   +G++
Sbjct: 416 KDFQKVAHFIHRGIELTLQIQSDTGVR 442


>AK223552-1|BAD97272.1|  483|Homo sapiens serine
           hydroxymethyltransferase 1 (soluble) isoform 1 variant
           protein.
          Length = 483

 Score =  251 bits (615), Expect = 1e-66
 Identities = 122/207 (58%), Positives = 147/207 (71%), Gaps = 1/207 (0%)
 Frame = +2

Query: 2   VAAGVIPSPFEYCDIVTTTTHKTLRGPRAGVIFFRKGVRSVKAN-GQKVMYDLESKINQA 178
           VAAGV+PSPFE+C +VTTTTHKTLRG RAG+IF+RKGV+SV    G++++Y+LES IN A
Sbjct: 236 VAAGVVPSPFEHCHVVTTTTHKTLRGCRAGMIFYRKGVKSVDPKTGKEILYNLESLINSA 295

Query: 179 VFPGLQGGPHNHXXXXXXXXXXXXXXXEFVEYQKQVIKNAQRLCEGLISRGYSIATGGTD 358
           VFPGLQGGPHNH               EF  YQ QV+ N + L E L   GY I TGG+D
Sbjct: 296 VFPGLQGGPHNHAIAEVAVALKQAMTLEFKVYQHQVVANCRALSEALTELGYKIVTGGSD 355

Query: 359 VHLALVDLRGVGLRGAPAERVLELCSVACNKNTVPGDISALNPSGIRLGTPALTTRGLKE 538
            HL LVDLR  G  G  AE+VLE CS+ACNKNT PGD SAL PSG+RLGTPALT+RGL E
Sbjct: 356 NHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDRSALRPSGLRLGTPALTSRGLLE 415

Query: 539 ADIDKVVDFIDRALKIGLEIIKVSGLK 619
            D  KV  FI R +++ L+I   +G++
Sbjct: 416 KDFQKVAHFIHRGIELTLQIQSDTGVR 442


>L11932-1|AAA63258.1|  474|Homo sapiens serine
           hydroxymethyltransferase protein.
          Length = 474

 Score =  243 bits (594), Expect = 5e-64
 Identities = 121/220 (55%), Positives = 152/220 (69%), Gaps = 1/220 (0%)
 Frame = +2

Query: 2   VAAGVIPSPFEYCDIVTTTTHKTLRGPRAGVIFFRKGVRSVKAN-GQKVMYDLESKINQA 178
           VAA VIPSPF++ DIVTTTTHKTLRG R+G+IF+RKGV++V    G++++Y  E +IN A
Sbjct: 229 VAAKVIPSPFKHADIVTTTTHKTLRGARSGLIFYRKGVKAVDPKTGREILYTFEDRINFA 288

Query: 179 VFPGLQGGPHNHXXXXXXXXXXXXXXXEFVEYQKQVIKNAQRLCEGLISRGYSIATGGTD 358
           VFP LQGGPHNH                F EY  QV+KNA+ + + L+ RGYS+ +GGTD
Sbjct: 289 VFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLERGYSLVSGGTD 348

Query: 359 VHLALVDLRGVGLRGAPAERVLELCSVACNKNTVPGDISALNPSGIRLGTPALTTRGLKE 538
            HL LVDLR  GL GA AERVLEL S+  NKNT PGD SA+ P G+RLG PALT+R  +E
Sbjct: 349 NHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFRE 408

Query: 539 ADIDKVVDFIDRALKIGLEIIKVSGLKLVDFNKAIEENAE 658
            D  +VVDFID  + IGLE +K    KL DF   + +++E
Sbjct: 409 DDFRRVVDFIDEGVNIGLE-VKSKTAKLQDFKSFLLKDSE 447


>U23143-1|AAA64572.1|  483|Homo sapiens mitochondrial serine
           hydroxymethyltransferase protein.
          Length = 483

 Score =  241 bits (590), Expect = 2e-63
 Identities = 121/220 (55%), Positives = 151/220 (68%), Gaps = 1/220 (0%)
 Frame = +2

Query: 2   VAAGVIPSPFEYCDIVTTTTHKTLRGPRAGVIFFRKGVRSVKAN-GQKVMYDLESKINQA 178
           VAA VIPSPF++ DIVTTTTHKTLRG R+G+IF+RKGV++V    G+++ Y  E +IN A
Sbjct: 238 VAAKVIPSPFKHADIVTTTTHKTLRGARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFA 297

Query: 179 VFPGLQGGPHNHXXXXXXXXXXXXXXXEFVEYQKQVIKNAQRLCEGLISRGYSIATGGTD 358
           VFP LQGGPHNH                F EY  QV+KNA+ + + L+ RGYS+ +GGTD
Sbjct: 298 VFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLERGYSLVSGGTD 357

Query: 359 VHLALVDLRGVGLRGAPAERVLELCSVACNKNTVPGDISALNPSGIRLGTPALTTRGLKE 538
            HL LVDLR  GL GA AERVLEL S+  NKNT PGD SA+ P G+RLG PALT+R  +E
Sbjct: 358 NHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFRE 417

Query: 539 ADIDKVVDFIDRALKIGLEIIKVSGLKLVDFNKAIEENAE 658
            D  +VVDFID  + IGLE +K    KL DF   + +++E
Sbjct: 418 DDFRRVVDFIDEGVNIGLE-VKSKTAKLQDFKSFLLKDSE 456


>BT006866-1|AAP35512.1|  504|Homo sapiens serine
           hydroxymethyltransferase 2 (mitochondrial) protein.
          Length = 504

 Score =  241 bits (590), Expect = 2e-63
 Identities = 121/220 (55%), Positives = 151/220 (68%), Gaps = 1/220 (0%)
 Frame = +2

Query: 2   VAAGVIPSPFEYCDIVTTTTHKTLRGPRAGVIFFRKGVRSVKAN-GQKVMYDLESKINQA 178
           VAA VIPSPF++ DIVTTTTHKTLRG R+G+IF+RKGV++V    G+++ Y  E +IN A
Sbjct: 259 VAAKVIPSPFKHADIVTTTTHKTLRGARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFA 318

Query: 179 VFPGLQGGPHNHXXXXXXXXXXXXXXXEFVEYQKQVIKNAQRLCEGLISRGYSIATGGTD 358
           VFP LQGGPHNH                F EY  QV+KNA+ + + L+ RGYS+ +GGTD
Sbjct: 319 VFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLERGYSLVSGGTD 378

Query: 359 VHLALVDLRGVGLRGAPAERVLELCSVACNKNTVPGDISALNPSGIRLGTPALTTRGLKE 538
            HL LVDLR  GL GA AERVLEL S+  NKNT PGD SA+ P G+RLG PALT+R  +E
Sbjct: 379 NHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFRE 438

Query: 539 ADIDKVVDFIDRALKIGLEIIKVSGLKLVDFNKAIEENAE 658
            D  +VVDFID  + IGLE +K    KL DF   + +++E
Sbjct: 439 DDFRRVVDFIDEGVNIGLE-VKSKTAKLQDFKSFLLKDSE 477


>BC091501-1|AAH91501.1|  480|Homo sapiens SHMT2 protein protein.
          Length = 480

 Score =  241 bits (590), Expect = 2e-63
 Identities = 121/220 (55%), Positives = 151/220 (68%), Gaps = 1/220 (0%)
 Frame = +2

Query: 2   VAAGVIPSPFEYCDIVTTTTHKTLRGPRAGVIFFRKGVRSVKAN-GQKVMYDLESKINQA 178
           VAA VIPSPF++ DIVTTTTHKTLRG R+G+IF+RKGV++V    G+++ Y  E +IN A
Sbjct: 235 VAAKVIPSPFKHADIVTTTTHKTLRGARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFA 294

Query: 179 VFPGLQGGPHNHXXXXXXXXXXXXXXXEFVEYQKQVIKNAQRLCEGLISRGYSIATGGTD 358
           VFP LQGGPHNH                F EY  QV+KNA+ + + L+ RGYS+ +GGTD
Sbjct: 295 VFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLERGYSLVSGGTD 354

Query: 359 VHLALVDLRGVGLRGAPAERVLELCSVACNKNTVPGDISALNPSGIRLGTPALTTRGLKE 538
            HL LVDLR  GL GA AERVLEL S+  NKNT PGD SA+ P G+RLG PALT+R  +E
Sbjct: 355 NHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFRE 414

Query: 539 ADIDKVVDFIDRALKIGLEIIKVSGLKLVDFNKAIEENAE 658
            D  +VVDFID  + IGLE +K    KL DF   + +++E
Sbjct: 415 DDFRRVVDFIDEGVNIGLE-VKSKTAKLQDFKSFLLKDSE 453


>BC044211-1|AAH44211.1|  504|Homo sapiens serine
           hydroxymethyltransferase 2 (mitochondrial) protein.
          Length = 504

 Score =  241 bits (590), Expect = 2e-63
 Identities = 121/220 (55%), Positives = 151/220 (68%), Gaps = 1/220 (0%)
 Frame = +2

Query: 2   VAAGVIPSPFEYCDIVTTTTHKTLRGPRAGVIFFRKGVRSVKAN-GQKVMYDLESKINQA 178
           VAA VIPSPF++ DIVTTTTHKTLRG R+G+IF+RKGV++V    G+++ Y  E +IN A
Sbjct: 259 VAAKVIPSPFKHADIVTTTTHKTLRGARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFA 318

Query: 179 VFPGLQGGPHNHXXXXXXXXXXXXXXXEFVEYQKQVIKNAQRLCEGLISRGYSIATGGTD 358
           VFP LQGGPHNH                F EY  QV+KNA+ + + L+ RGYS+ +GGTD
Sbjct: 319 VFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLERGYSLVSGGTD 378

Query: 359 VHLALVDLRGVGLRGAPAERVLELCSVACNKNTVPGDISALNPSGIRLGTPALTTRGLKE 538
            HL LVDLR  GL GA AERVLEL S+  NKNT PGD SA+ P G+RLG PALT+R  +E
Sbjct: 379 NHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFRE 438

Query: 539 ADIDKVVDFIDRALKIGLEIIKVSGLKLVDFNKAIEENAE 658
            D  +VVDFID  + IGLE +K    KL DF   + +++E
Sbjct: 439 DDFRRVVDFIDEGVNIGLE-VKSKTAKLQDFKSFLLKDSE 477


>BC032584-1|AAH32584.1|  494|Homo sapiens SHMT2 protein protein.
          Length = 494

 Score =  241 bits (590), Expect = 2e-63
 Identities = 121/220 (55%), Positives = 151/220 (68%), Gaps = 1/220 (0%)
 Frame = +2

Query: 2   VAAGVIPSPFEYCDIVTTTTHKTLRGPRAGVIFFRKGVRSVKAN-GQKVMYDLESKINQA 178
           VAA VIPSPF++ DIVTTTTHKTLRG R+G+IF+RKGV++V    G+++ Y  E +IN A
Sbjct: 249 VAAKVIPSPFKHADIVTTTTHKTLRGARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFA 308

Query: 179 VFPGLQGGPHNHXXXXXXXXXXXXXXXEFVEYQKQVIKNAQRLCEGLISRGYSIATGGTD 358
           VFP LQGGPHNH                F EY  QV+KNA+ + + L+ RGYS+ +GGTD
Sbjct: 309 VFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLERGYSLVSGGTD 368

Query: 359 VHLALVDLRGVGLRGAPAERVLELCSVACNKNTVPGDISALNPSGIRLGTPALTTRGLKE 538
            HL LVDLR  GL GA AERVLEL S+  NKNT PGD SA+ P G+RLG PALT+R  +E
Sbjct: 369 NHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFRE 428

Query: 539 ADIDKVVDFIDRALKIGLEIIKVSGLKLVDFNKAIEENAE 658
            D  +VVDFID  + IGLE +K    KL DF   + +++E
Sbjct: 429 DDFRRVVDFIDEGVNIGLE-VKSKTAKLQDFKSFLLKDSE 467


>BC013677-1|AAH13677.1|  504|Homo sapiens serine
           hydroxymethyltransferase 2 (mitochondrial) protein.
          Length = 504

 Score =  241 bits (590), Expect = 2e-63
 Identities = 121/220 (55%), Positives = 151/220 (68%), Gaps = 1/220 (0%)
 Frame = +2

Query: 2   VAAGVIPSPFEYCDIVTTTTHKTLRGPRAGVIFFRKGVRSVKAN-GQKVMYDLESKINQA 178
           VAA VIPSPF++ DIVTTTTHKTLRG R+G+IF+RKGV++V    G+++ Y  E +IN A
Sbjct: 259 VAAKVIPSPFKHADIVTTTTHKTLRGARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFA 318

Query: 179 VFPGLQGGPHNHXXXXXXXXXXXXXXXEFVEYQKQVIKNAQRLCEGLISRGYSIATGGTD 358
           VFP LQGGPHNH                F EY  QV+KNA+ + + L+ RGYS+ +GGTD
Sbjct: 319 VFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLERGYSLVSGGTD 378

Query: 359 VHLALVDLRGVGLRGAPAERVLELCSVACNKNTVPGDISALNPSGIRLGTPALTTRGLKE 538
            HL LVDLR  GL GA AERVLEL S+  NKNT PGD SA+ P G+RLG PALT+R  +E
Sbjct: 379 NHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFRE 438

Query: 539 ADIDKVVDFIDRALKIGLEIIKVSGLKLVDFNKAIEENAE 658
            D  +VVDFID  + IGLE +K    KL DF   + +++E
Sbjct: 439 DDFRRVVDFIDEGVNIGLE-VKSKTAKLQDFKSFLLKDSE 477


>BC011911-1|AAH11911.1|  504|Homo sapiens serine
           hydroxymethyltransferase 2 (mitochondrial) protein.
          Length = 504

 Score =  241 bits (590), Expect = 2e-63
 Identities = 121/220 (55%), Positives = 151/220 (68%), Gaps = 1/220 (0%)
 Frame = +2

Query: 2   VAAGVIPSPFEYCDIVTTTTHKTLRGPRAGVIFFRKGVRSVKAN-GQKVMYDLESKINQA 178
           VAA VIPSPF++ DIVTTTTHKTLRG R+G+IF+RKGV++V    G+++ Y  E +IN A
Sbjct: 259 VAAKVIPSPFKHADIVTTTTHKTLRGARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFA 318

Query: 179 VFPGLQGGPHNHXXXXXXXXXXXXXXXEFVEYQKQVIKNAQRLCEGLISRGYSIATGGTD 358
           VFP LQGGPHNH                F EY  QV+KNA+ + + L+ RGYS+ +GGTD
Sbjct: 319 VFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLERGYSLVSGGTD 378

Query: 359 VHLALVDLRGVGLRGAPAERVLELCSVACNKNTVPGDISALNPSGIRLGTPALTTRGLKE 538
            HL LVDLR  GL GA AERVLEL S+  NKNT PGD SA+ P G+RLG PALT+R  +E
Sbjct: 379 NHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFRE 438

Query: 539 ADIDKVVDFIDRALKIGLEIIKVSGLKLVDFNKAIEENAE 658
            D  +VVDFID  + IGLE +K    KL DF   + +++E
Sbjct: 439 DDFRRVVDFIDEGVNIGLE-VKSKTAKLQDFKSFLLKDSE 477


>AK223555-1|BAD97275.1|  504|Homo sapiens serine
           hydroxymethyltransferase 2 (mitochondrial) variant
           protein.
          Length = 504

 Score =  240 bits (587), Expect = 4e-63
 Identities = 121/220 (55%), Positives = 150/220 (68%), Gaps = 1/220 (0%)
 Frame = +2

Query: 2   VAAGVIPSPFEYCDIVTTTTHKTLRGPRAGVIFFRKGVRSVKAN-GQKVMYDLESKINQA 178
           VAA VIPSPF++ DIVTTTTHKTLRG R+G+IF+RKGV++V    G+++ Y  E +IN A
Sbjct: 259 VAAKVIPSPFKHADIVTTTTHKTLRGARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFA 318

Query: 179 VFPGLQGGPHNHXXXXXXXXXXXXXXXEFVEYQKQVIKNAQRLCEGLISRGYSIATGGTD 358
           VFP LQGGPHNH                F EY  QV+KNA+ + + L+ RGYS+ +GGTD
Sbjct: 319 VFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLERGYSLVSGGTD 378

Query: 359 VHLALVDLRGVGLRGAPAERVLELCSVACNKNTVPGDISALNPSGIRLGTPALTTRGLKE 538
            HL LVDLR  GL GA AERVLEL S+  NKNT PGD SA+ P G+RLG PALT+R   E
Sbjct: 379 NHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFHE 438

Query: 539 ADIDKVVDFIDRALKIGLEIIKVSGLKLVDFNKAIEENAE 658
            D  +VVDFID  + IGLE +K    KL DF   + +++E
Sbjct: 439 DDFRRVVDFIDEGVNIGLE-VKSKTAKLQDFKSFLLKDSE 477


>L23928-2|AAA36018.1|  444|Homo sapiens serine
           hydroxymethyltransferase protein.
          Length = 444

 Score =  142 bits (344), Expect = 1e-33
 Identities = 69/120 (57%), Positives = 83/120 (69%)
 Frame = +2

Query: 260 EFVEYQKQVIKNAQRLCEGLISRGYSIATGGTDVHLALVDLRGVGLRGAPAERVLELCSV 439
           EF  YQ QV+ N + L E L   GY I TGG+D HL LVDLR  G  G  AE+VLE CS+
Sbjct: 284 EFKVYQHQVVANCRALSEALTELGYKIVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSI 343

Query: 440 ACNKNTVPGDISALNPSGIRLGTPALTTRGLKEADIDKVVDFIDRALKIGLEIIKVSGLK 619
           ACNKNT PGD SAL PSG+RLGTPALT+RGL E D  KV  FI R +++ L+I   +G++
Sbjct: 344 ACNKNTCPGDRSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIELTLQIQSDTGVR 403



 Score = 72.5 bits (170), Expect = 1e-12
 Identities = 31/38 (81%), Positives = 36/38 (94%)
 Frame = +2

Query: 2   VAAGVIPSPFEYCDIVTTTTHKTLRGPRAGVIFFRKGV 115
           VAAGV+PSPFE+C +VTTTTHKTLRG RAG+IF+RKGV
Sbjct: 236 VAAGVVPSPFEHCHVVTTTTHKTLRGCRAGMIFYRKGV 273


>BC022874-1|AAH22874.1|  444|Homo sapiens serine
           hydroxymethyltransferase 1 (soluble) protein.
          Length = 444

 Score =  142 bits (344), Expect = 1e-33
 Identities = 69/120 (57%), Positives = 83/120 (69%)
 Frame = +2

Query: 260 EFVEYQKQVIKNAQRLCEGLISRGYSIATGGTDVHLALVDLRGVGLRGAPAERVLELCSV 439
           EF  YQ QV+ N + L E L   GY I TGG+D HL LVDLR  G  G  AE+VLE CS+
Sbjct: 284 EFKVYQHQVVANCRALSEALTELGYKIVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSI 343

Query: 440 ACNKNTVPGDISALNPSGIRLGTPALTTRGLKEADIDKVVDFIDRALKIGLEIIKVSGLK 619
           ACNKNT PGD SAL PSG+RLGTPALT+RGL E D  KV  FI R +++ L+I   +G++
Sbjct: 344 ACNKNTCPGDRSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIELTLQIQSDTGVR 403



 Score = 72.5 bits (170), Expect = 1e-12
 Identities = 31/38 (81%), Positives = 36/38 (94%)
 Frame = +2

Query: 2   VAAGVIPSPFEYCDIVTTTTHKTLRGPRAGVIFFRKGV 115
           VAAGV+PSPFE+C +VTTTTHKTLRG RAG+IF+RKGV
Sbjct: 236 VAAGVVPSPFEHCHVVTTTTHKTLRGCRAGMIFYRKGV 273


>Y14487-1|CAB54840.1|  347|Homo sapiens cytosolic serine
           hydroxymethyltransferase protein.
          Length = 347

 Score =  136 bits (328), Expect = 9e-32
 Identities = 65/112 (58%), Positives = 78/112 (69%), Gaps = 1/112 (0%)
 Frame = +2

Query: 2   VAAGVIPSPFEYCDIVTTTTHKTLRGPRAGVIFFRKGVRSV-KANGQKVMYDLESKINQA 178
           VAAGV+PSPFE+C +VTTTTHKTLRG RAG+IF+RKGV+SV    G++++Y+LES IN A
Sbjct: 236 VAAGVVPSPFEHCHVVTTTTHKTLRGCRAGMIFYRKGVKSVDPKTGKEILYNLESLINSA 295

Query: 179 VFPGLQGGPHNHXXXXXXXXXXXXXXXEFVEYQKQVIKNAQRLCEGLISRGY 334
           VFPGLQGGPHNH               EF  YQ QV+ N + L E L   GY
Sbjct: 296 VFPGLQGGPHNHAIAGVAVALKQAMTLEFKVYQHQVVANCRALSEALTELGY 347


>L23928-3|AAA36019.1|  403|Homo sapiens serine
           hydroxymethyltransferase protein.
          Length = 403

 Score =  116 bits (278), Expect = 1e-25
 Identities = 55/91 (60%), Positives = 67/91 (73%)
 Frame = +2

Query: 347 GGTDVHLALVDLRGVGLRGAPAERVLELCSVACNKNTVPGDISALNPSGIRLGTPALTTR 526
           GG+D HL LVDLR  G  G  AE+VLE CS+ACNKNT PGD SAL PSG+RLGTPALT+R
Sbjct: 272 GGSDNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDRSALRPSGLRLGTPALTSR 331

Query: 527 GLKEADIDKVVDFIDRALKIGLEIIKVSGLK 619
           GL E D  KV  FI R +++ L+I   +G++
Sbjct: 332 GLLEKDFQKVAHFIHRGIELTLQIQSDTGVR 362



 Score = 72.5 bits (170), Expect = 1e-12
 Identities = 34/55 (61%), Positives = 43/55 (78%)
 Frame = +2

Query: 2   VAAGVIPSPFEYCDIVTTTTHKTLRGPRAGVIFFRKGVRSVKANGQKVMYDLESK 166
           VAAGV+PSPFE+C +VTTTTHKTLRG RAG+IF+RKG     ++   ++ DL SK
Sbjct: 236 VAAGVVPSPFEHCHVVTTTTHKTLRGCRAGMIFYRKG----GSDNHLILVDLRSK 286


>Y14489-1|CAB54842.1|   92|Homo sapiens cytosolic serine
           hydroxymethyltransferase protein.
          Length = 92

 Score = 59.3 bits (137), Expect = 1e-08
 Identities = 28/51 (54%), Positives = 37/51 (72%)
 Frame = +2

Query: 467 DISALNPSGIRLGTPALTTRGLKEADIDKVVDFIDRALKIGLEIIKVSGLK 619
           D SAL PSG+RLGTPALT+RGL E D  KV  FI R +++ L+I   +G++
Sbjct: 1   DRSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIELTLQIQSDTGVR 51


>AK126938-1|BAC86756.1|  145|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44991 fis, clone BRAWH3008867. ).
          Length = 145

 Score = 33.9 bits (74), Expect = 0.52
 Identities = 30/107 (28%), Positives = 50/107 (46%)
 Frame = +2

Query: 302 RLCEGLISRGYSIATGGTDVHLALVDLRGVGLRGAPAERVLELCSVACNKNTVPGDISAL 481
           +LC   +  G  +A   T + L  V L   GL        L+LCSVA   +     + AL
Sbjct: 14  KLCSEALLSGGLVALEVTALKLCSVTLASGGLVALEVT-ALKLCSVALMSD----GLVAL 68

Query: 482 NPSGIRLGTPALTTRGLKEADIDKVVDFIDRALKIGLEIIKVSGLKL 622
             + ++L + AL + GL   ++  +      +L +GL  ++V+ LKL
Sbjct: 69  EVTSLKLCSVALLSGGLVALEVTSLKLCSVASLSVGLVALEVTSLKL 115


>AF143946-1|AAD39760.1| 2971|Homo sapiens transcriptional activator
            SRCAP protein.
          Length = 2971

 Score = 33.9 bits (74), Expect = 0.52
 Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
 Frame = -1

Query: 633  LKSTSFSPETLMISRPIFNALSIKSTTLSISASLRPLVVNA-GVPSLMPLGLSALMSPGT 457
            L + + +P T+ IS P+  + S  +   S++  L P+V  A G PSL P G S   S  T
Sbjct: 1188 LPAPASAPLTIPISAPLTVSASGPALLTSVTPPLAPVVPAAPGPPSLQPSGASPSASALT 1247

Query: 456  VFLLQATLQSSS 421
            + L  A   SSS
Sbjct: 1248 LGLATAPSLSSS 1259


>AK128030-1|BAC87237.1| 2427|Homo sapiens protein ( Homo sapiens cDNA
            FLJ46149 fis, clone TESTI4000621, moderately  similar to
            Homo sapiens Snf2-related CBP activator protein (SRCAP).
            ).
          Length = 2427

 Score = 33.5 bits (73), Expect = 0.69
 Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
 Frame = -1

Query: 633  LKSTSFSPETLMISRPIFNALSIKSTTLSISASLRPLVVNA-GVPSLMPLGLSALMSPGT 457
            L + + +P T+ IS P+  + S  +   S++  L P+V  A G PSL P G S   S  T
Sbjct: 1447 LPAPASAPLTIPISAPLTVSASGPALLTSVTPPLAPVVPAAPGPPSLAPSGASPSASALT 1506

Query: 456  VFLLQATLQSSS 421
            + L  A   SSS
Sbjct: 1507 LGLATAPSLSSS 1518


>AK126463-1|BAC86558.1|  559|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44499 fis, clone UTERU3000665, highly  similar
           to Homo sapiens Snf2-related CBP activator protein
           (SRCAP). ).
          Length = 559

 Score = 33.5 bits (73), Expect = 0.69
 Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
 Frame = -1

Query: 633 LKSTSFSPETLMISRPIFNALSIKSTTLSISASLRPLVVNA-GVPSLMPLGLSALMSPGT 457
           L + + +P T+ IS P+  + S  +   S++  L P+V  A G PSL P G S   S  T
Sbjct: 96  LPAPASAPLTIPISAPLTVSASGPALLTSVTPPLAPVVPAAPGPPSLAPSGASPSASALT 155

Query: 456 VFLLQATLQSSS 421
           + L  A   SSS
Sbjct: 156 LGLATAPSLSSS 167


>AB002307-1|BAA20768.2| 3053|Homo sapiens KIAA0309 protein.
          Length = 3053

 Score = 33.5 bits (73), Expect = 0.69
 Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
 Frame = -1

Query: 633  LKSTSFSPETLMISRPIFNALSIKSTTLSISASLRPLVVNA-GVPSLMPLGLSALMSPGT 457
            L + + +P T+ IS P+  + S  +   S++  L P+V  A G PSL P G S   S  T
Sbjct: 1270 LPAPASAPLTIPISAPLTVSASGPALLTSVTPPLAPVVPAAPGPPSLAPSGASPSASALT 1329

Query: 456  VFLLQATLQSSS 421
            + L  A   SSS
Sbjct: 1330 LGLATAPSLSSS 1341


>AF283408-1|AAL38109.1| 1537|Homo sapiens candidate tumor suppressor
           protein protein.
          Length = 1537

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = +3

Query: 348 AAPTCTSRSWICAASGC 398
           A+PTC+SR +ICA+ GC
Sbjct: 914 ASPTCSSREYICASDGC 930


>AF176832-1|AAF70379.1| 4599|Homo sapiens low density lipoprotein
            receptor related protein-deleted in tumor protein.
          Length = 4599

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = +3

Query: 348  AAPTCTSRSWICAASGC 398
            A+PTC+SR +ICA+ GC
Sbjct: 3590 ASPTCSSREYICASDGC 3606


>AC068195-1|AAX93243.1| 1126|Homo sapiens unknown protein.
          Length = 1126

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = +3

Query: 348 AAPTCTSRSWICAASGC 398
           A+PTC+SR +ICA+ GC
Sbjct: 448 ASPTCSSREYICASDGC 464


>AB209707-1|BAD92944.1| 1720|Homo sapiens low density
           lipoprotein-related protein 1B variant protein.
          Length = 1720

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = +3

Query: 348 AAPTCTSRSWICAASGC 398
           A+PTC+SR +ICA+ GC
Sbjct: 711 ASPTCSSREYICASDGC 727


>L14837-1|AAA02891.1| 1736|Homo sapiens tight junction (zonula
           occludens) protein ZO-1 protein.
          Length = 1736

 Score = 30.7 bits (66), Expect = 4.9
 Identities = 25/67 (37%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
 Frame = +2

Query: 2   VAAGVIPSP--FEYCDIVTTTTHKTLRGPRAGVIFFRKGVRSVKANGQKVMYDLESKINQ 175
           V  G+IP+    E    V  T  KT  G RA    FR G+RS K N +K   DL ++  Q
Sbjct: 557 VERGIIPNKNRAEQLASVQYTLPKTAGGDRADFWRFR-GLRSSKRNLRKSREDLSAQPVQ 615

Query: 176 AVFPGLQ 196
             FP  +
Sbjct: 616 TKFPAYE 622


>DQ015919-1|AAY22179.1| 1748|Homo sapiens tight junction protein 1
           (zona occludens 1) protein.
          Length = 1748

 Score = 30.7 bits (66), Expect = 4.9
 Identities = 25/67 (37%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
 Frame = +2

Query: 2   VAAGVIPSP--FEYCDIVTTTTHKTLRGPRAGVIFFRKGVRSVKANGQKVMYDLESKINQ 175
           V  G+IP+    E    V  T  KT  G RA    FR G+RS K N +K   DL ++  Q
Sbjct: 569 VERGIIPNKNRAEQLASVQYTLPKTAGGDRADFWRFR-GLRSSKRNLRKSREDLSAQPVQ 627

Query: 176 AVFPGLQ 196
             FP  +
Sbjct: 628 TKFPAYE 634


>BC111712-1|AAI11713.1| 1748|Homo sapiens tight junction protein 1
           (zona occludens 1) protein.
          Length = 1748

 Score = 30.7 bits (66), Expect = 4.9
 Identities = 25/67 (37%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
 Frame = +2

Query: 2   VAAGVIPSP--FEYCDIVTTTTHKTLRGPRAGVIFFRKGVRSVKANGQKVMYDLESKINQ 175
           V  G+IP+    E    V  T  KT  G RA    FR G+RS K N +K   DL ++  Q
Sbjct: 569 VERGIIPNKNRAEQLASVQYTLPKTAGGDRADFWRFR-GLRSSKRNLRKSREDLSAQPVQ 627

Query: 176 AVFPGLQ 196
             FP  +
Sbjct: 628 TKFPAYE 634


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,404,321
Number of Sequences: 237096
Number of extensions: 1716535
Number of successful extensions: 4692
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 4360
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4666
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7478817430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -