Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte4h06
(663 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00048-13|AAB53830.1| 484|Caenorhabditis elegans Maternal effec... 266 7e-72
U00048-12|AAL27228.1| 507|Caenorhabditis elegans Maternal effec... 266 7e-72
Z99281-41|CAB16523.1| 444|Caenorhabditis elegans Hypothetical p... 32 0.32
Z70756-10|CAI46587.1| 228|Caenorhabditis elegans Hypothetical p... 31 0.73
U80030-13|AAG24169.1| 831|Caenorhabditis elegans Hypothetical p... 29 2.9
AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical... 29 2.9
Z98877-14|CAD56615.1| 338|Caenorhabditis elegans Hypothetical p... 28 6.8
Z68336-3|CAA92735.1| 710|Caenorhabditis elegans Hypothetical pr... 28 6.8
AF106579-6|ABS19465.1| 406|Caenorhabditis elegans Hypothetical ... 28 6.8
AF003150-3|AAB54214.1| 208|Caenorhabditis elegans Collagen prot... 28 6.8
AC084153-7|AAK84593.1| 451|Caenorhabditis elegans Hypothetical ... 27 9.0
>U00048-13|AAB53830.1| 484|Caenorhabditis elegans Maternal effect
lethal protein32, isoform a protein.
Length = 484
Score = 266 bits (653), Expect = 7e-72
Identities = 127/220 (57%), Positives = 153/220 (69%)
Frame = +2
Query: 2 VAAGVIPSPFEYCDIVTTTTHKTLRGPRAGVIFFRKGVRSVKANGQKVMYDLESKINQAV 181
VAAG+IPSPFEY D+VTTTTHK+LRGPR +IF+RKGVRS A G +YDLE KIN AV
Sbjct: 239 VAAGLIPSPFEYSDVVTTTTHKSLRGPRGALIFYRKGVRSTNAKGVDTLYDLEEKINSAV 298
Query: 182 FPGLQGGPHNHXXXXXXXXXXXXXXXEFVEYQKQVIKNAQRLCEGLISRGYSIATGGTDV 361
FPGLQGGPHNH +FV+Y +QV+KNA+ L E + GY++ATGGTD
Sbjct: 299 FPGLQGGPHNHTIAGIAVALRQCLSEDFVQYGEQVLKNAKTLAERMKKHGYALATGGTDN 358
Query: 362 HLALVDLRGVGLRGAPAERVLELCSVACNKNTVPGDISALNPSGIRLGTPALTTRGLKEA 541
HL LVDLR +G+ GA AE VL+L +ACNKNT PGD+SAL P GIRLGTPALT+RG +E
Sbjct: 359 HLLLVDLRPIGVEGARAEHVLDLAHIACNKNTCPGDVSALRPGGIRLGTPALTSRGFQEQ 418
Query: 542 DIDKVVDFIDRALKIGLEIIKVSGLKLVDFNKAIEENAEF 661
D +KV DFI ++I + +G L DF E N F
Sbjct: 419 DFEKVGDFIHEGVQIAKKYNAEAGKTLKDFKSFTETNEPF 458
>U00048-12|AAL27228.1| 507|Caenorhabditis elegans Maternal effect
lethal protein32, isoform b protein.
Length = 507
Score = 266 bits (653), Expect = 7e-72
Identities = 127/220 (57%), Positives = 153/220 (69%)
Frame = +2
Query: 2 VAAGVIPSPFEYCDIVTTTTHKTLRGPRAGVIFFRKGVRSVKANGQKVMYDLESKINQAV 181
VAAG+IPSPFEY D+VTTTTHK+LRGPR +IF+RKGVRS A G +YDLE KIN AV
Sbjct: 262 VAAGLIPSPFEYSDVVTTTTHKSLRGPRGALIFYRKGVRSTNAKGVDTLYDLEEKINSAV 321
Query: 182 FPGLQGGPHNHXXXXXXXXXXXXXXXEFVEYQKQVIKNAQRLCEGLISRGYSIATGGTDV 361
FPGLQGGPHNH +FV+Y +QV+KNA+ L E + GY++ATGGTD
Sbjct: 322 FPGLQGGPHNHTIAGIAVALRQCLSEDFVQYGEQVLKNAKTLAERMKKHGYALATGGTDN 381
Query: 362 HLALVDLRGVGLRGAPAERVLELCSVACNKNTVPGDISALNPSGIRLGTPALTTRGLKEA 541
HL LVDLR +G+ GA AE VL+L +ACNKNT PGD+SAL P GIRLGTPALT+RG +E
Sbjct: 382 HLLLVDLRPIGVEGARAEHVLDLAHIACNKNTCPGDVSALRPGGIRLGTPALTSRGFQEQ 441
Query: 542 DIDKVVDFIDRALKIGLEIIKVSGLKLVDFNKAIEENAEF 661
D +KV DFI ++I + +G L DF E N F
Sbjct: 442 DFEKVGDFIHEGVQIAKKYNAEAGKTLKDFKSFTETNEPF 481
>Z99281-41|CAB16523.1| 444|Caenorhabditis elegans Hypothetical
protein Y57G11C.22a protein.
Length = 444
Score = 32.3 bits (70), Expect = 0.32
Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 2/99 (2%)
Frame = +2
Query: 371 LVDLRGVGLRGAPAERVLELCSVACNKNTVPGDISALNPSGIRLGTPALTTRGLKEADID 550
+V + G+ ++G V +L V+ N + I+ L + + T + + +K
Sbjct: 66 IVAINGITVKGERKSAVAQLIQVSLNPVKIT--INKLEEANTKGKTLDILIKKVKH---- 119
Query: 551 KVVDFIDR--ALKIGLEIIKVSGLKLVDFNKAIEENAEF 661
KVV+F+D+ A +GL ++ L + K +EENAEF
Sbjct: 120 KVVEFVDQDSADALGLSRAILTNDPLAEKEKILEENAEF 158
>Z70756-10|CAI46587.1| 228|Caenorhabditis elegans Hypothetical
protein T06E4.12 protein.
Length = 228
Score = 31.1 bits (67), Expect = 0.73
Identities = 15/61 (24%), Positives = 32/61 (52%)
Frame = -1
Query: 657 SAFSSMALLKSTSFSPETLMISRPIFNALSIKSTTLSISASLRPLVVNAGVPSLMPLGLS 478
SAF+ +L + +F+P ++ RP+ A +I + + + RP++ +P+ P +
Sbjct: 124 SAFAPRPVLAAPAFAPAPILAPRPVLAAPAIPAFAPAPLLAPRPVLAAPAIPAFAPAPII 183
Query: 477 A 475
A
Sbjct: 184 A 184
>U80030-13|AAG24169.1| 831|Caenorhabditis elegans Hypothetical
protein K12D9.12 protein.
Length = 831
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -3
Query: 655 SIFFNGFIEVNKFQPG-NLNDF*TYFQCSINKIDNFINIS 539
S+FF FI + K P NLN ++FQC + N+ IS
Sbjct: 10 SLFFLTFILICKTDPRENLNTIVSFFQCEDKCVFNYTEIS 49
>AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical
protein F59E12.1 protein.
Length = 811
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +1
Query: 88 RCHILPQGREVRQGERTEGHVRFGIEDKPGCVPGPAGRTAQPRNSGHSHGHETS 249
R HI P R+VR+ +R + PGP G + P N+ S G +T+
Sbjct: 471 RSHIPPVTRKVRKSMMPSESIRSVSRNSSTSTPGPRGSSVVP-NAMRSQGMQTN 523
>Z98877-14|CAD56615.1| 338|Caenorhabditis elegans Hypothetical
protein Y69H2.14 protein.
Length = 338
Score = 27.9 bits (59), Expect = 6.8
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +1
Query: 184 PGPAGRTAQPRNSGHSHGHETS 249
PGPAG+ QP GHS T+
Sbjct: 206 PGPAGQPGQPGEPGHSDTSSTA 227
>Z68336-3|CAA92735.1| 710|Caenorhabditis elegans Hypothetical
protein F22B3.4 protein.
Length = 710
Score = 27.9 bits (59), Expect = 6.8
Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Frame = +2
Query: 404 APAERVLELCSVACNKNTVPGDISALNPSGIRLGTP-ALTTRGLKEADID--KVVDFIDR 574
A + L +C V CN + ++AL R G P + + E+D+ K V + R
Sbjct: 609 AMVDEFLSICMVVCNDHVYKKSLNALQQVVARKGAPIIIADSSVPESDLAGMKHVLRVPR 668
Query: 575 ALKIGLEIIKVSGLKLVDFNKA 640
+ I+ V L+L+ ++ A
Sbjct: 669 TVDCVQNILTVIPLQLLSYHIA 690
>AF106579-6|ABS19465.1| 406|Caenorhabditis elegans Hypothetical
protein F54E2.4 protein.
Length = 406
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +2
Query: 275 QKQVIKNAQRLCEGLISRGYSIATGGTDVHLALVDLRGVGLR 400
QKQ+ K +G + ++I+ T+ L+ +D RGVG +
Sbjct: 261 QKQMQKQGYDTDQGSVDMHWTISESETEPELSALDARGVGTK 302
>AF003150-3|AAB54214.1| 208|Caenorhabditis elegans Collagen protein
55 protein.
Length = 208
Score = 27.9 bits (59), Expect = 6.8
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = +1
Query: 103 PQGREVRQGERTEGHVRFGIEDKPGCV--PGPAGRTAQPRNSGHS 231
P G+ QGE +GHV + +PG GPAG QP SG S
Sbjct: 109 PPGQPGAQGE--QGHVE--VSGQPGAPRPQGPAGGPGQPVQSGGS 149
>AC084153-7|AAK84593.1| 451|Caenorhabditis elegans Hypothetical
protein Y22D7AL.4 protein.
Length = 451
Score = 27.5 bits (58), Expect = 9.0
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = +1
Query: 133 RTEGHVRFGIEDKPGCVPGPAGRTAQPRNSGHSHGHETSYN 255
RT GH+ GI D G PG G A+P + G YN
Sbjct: 71 RTNGHIYAGILDINGAEPGDKG--AEPNQNLSISGTAKVYN 109
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,176,735
Number of Sequences: 27780
Number of extensions: 261657
Number of successful extensions: 932
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 812
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 931
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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