BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte4h05
(597 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF522196-1|AAN45861.1| 870|Homo sapiens scavenger receptor type... 34 0.44
AB052951-1|BAC53753.1| 866|Homo sapiens SRECRP-1 protein. 34 0.44
AB024433-1|BAD93345.1| 866|Homo sapiens NSR1 protein. 34 0.44
BC126277-1|AAI26278.1| 1205|Homo sapiens PH domain and leucine r... 31 3.1
BC082244-1|AAH82244.1| 465|Homo sapiens PHLPP protein protein. 31 3.1
BC014927-1|AAH14927.3| 1205|Homo sapiens PH domain and leucine r... 31 3.1
AK001924-1|BAA91980.1| 721|Homo sapiens protein ( Homo sapiens ... 31 3.1
AB011178-1|BAA25532.2| 1369|Homo sapiens KIAA0606 protein protein. 31 3.1
AB231860-1|BAE19678.1| 1640|Homo sapiens hypothetical protein pr... 31 4.1
BC126313-1|AAI26314.1| 1044|Homo sapiens MEGF11 protein protein. 29 9.5
BC117419-1|AAI17420.1| 1044|Homo sapiens MEGF11 protein protein. 29 9.5
AL834326-1|CAD38994.1| 626|Homo sapiens hypothetical protein pr... 29 9.5
AL356104-4|CAH72941.1| 1037|Homo sapiens novel protein similar t... 29 9.5
AL158169-5|CAH70011.1| 1037|Homo sapiens novel protein similar t... 29 9.5
AK128673-1|BAC87564.1| 189|Homo sapiens protein ( Homo sapiens ... 29 9.5
AB300051-1|BAF64841.1| 1044|Homo sapiens MEGF11 protein. 29 9.5
AB058677-1|BAB47410.1| 969|Homo sapiens MEGF11 protein (KIAA178... 29 9.5
>AF522196-1|AAN45861.1| 870|Homo sapiens scavenger receptor type F
protein.
Length = 870
Score = 33.9 bits (74), Expect = 0.44
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -2
Query: 506 CFARLSSRACIVSTRGAKCEQSIYCEQSSGCNCAYGRCLC 387
C R + C GA+C + YC +S C+ G CLC
Sbjct: 163 CHPRSGACRCEPGWWGAQCASACYCSATSRCDPQTGACLC 202
>AB052951-1|BAC53753.1| 866|Homo sapiens SRECRP-1 protein.
Length = 866
Score = 33.9 bits (74), Expect = 0.44
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -2
Query: 506 CFARLSSRACIVSTRGAKCEQSIYCEQSSGCNCAYGRCLC 387
C R + C GA+C + YC +S C+ G CLC
Sbjct: 163 CHPRSGACRCESGWWGAQCASACYCSATSRCDPQTGACLC 202
>AB024433-1|BAD93345.1| 866|Homo sapiens NSR1 protein.
Length = 866
Score = 33.9 bits (74), Expect = 0.44
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -2
Query: 506 CFARLSSRACIVSTRGAKCEQSIYCEQSSGCNCAYGRCLC 387
C R + C GA+C + YC +S C+ G CLC
Sbjct: 163 CHPRSGACRCEPGWWGAQCASACYCSATSRCDPQTGACLC 202
>BC126277-1|AAI26278.1| 1205|Homo sapiens PH domain and leucine rich
repeat protein phosphatase protein.
Length = 1205
Score = 31.1 bits (67), Expect = 3.1
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = +2
Query: 38 TQNLFKLTKFIEVKKKDVNTYLYYKVYGIIASNI--MSHVTSIQLRSNRFADADALFRNV 211
T L L K +K D+ + K +IA + + HVT + LR N+ D DA+ N
Sbjct: 285 TLRLQALRKMPHIKHVDLRLNVIRK---LIADEVDFLQHVTQLDLRDNKLGDLDAMIFNN 341
Query: 212 CGIYH 226
+ H
Sbjct: 342 IEVLH 346
>BC082244-1|AAH82244.1| 465|Homo sapiens PHLPP protein protein.
Length = 465
Score = 31.1 bits (67), Expect = 3.1
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = +2
Query: 38 TQNLFKLTKFIEVKKKDVNTYLYYKVYGIIASNI--MSHVTSIQLRSNRFADADALFRNV 211
T L L K +K D+ + K +IA + + HVT + LR N+ D DA+ N
Sbjct: 21 TLRLQALRKMPHIKHVDLRLNVIRK---LIADEVDFLQHVTQLDLRDNKLGDLDAMIFNN 77
Query: 212 CGIYH 226
+ H
Sbjct: 78 IEVLH 82
>BC014927-1|AAH14927.3| 1205|Homo sapiens PH domain and leucine rich
repeat protein phosphatase protein.
Length = 1205
Score = 31.1 bits (67), Expect = 3.1
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = +2
Query: 38 TQNLFKLTKFIEVKKKDVNTYLYYKVYGIIASNI--MSHVTSIQLRSNRFADADALFRNV 211
T L L K +K D+ + K +IA + + HVT + LR N+ D DA+ N
Sbjct: 285 TLRLQALRKMPHIKHVDLRLNVIRK---LIADEVDFLQHVTQLDLRDNKLGDLDAMIFNN 341
Query: 212 CGIYH 226
+ H
Sbjct: 342 IEVLH 346
>AK001924-1|BAA91980.1| 721|Homo sapiens protein ( Homo sapiens
cDNA FLJ11062 fis, clone PLACE1004804, weakly similar to
ADENYLATE CYCLASE (EC 4.6.1.1). ).
Length = 721
Score = 31.1 bits (67), Expect = 3.1
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = +2
Query: 38 TQNLFKLTKFIEVKKKDVNTYLYYKVYGIIASNI--MSHVTSIQLRSNRFADADALFRNV 211
T L L K +K D+ + K +IA + + HVT + LR N+ D DA+ N
Sbjct: 285 TLRLQALRKMPHIKHVDLRLNVIRK---LIADEVDFLQHVTQLDLRDNKLGDLDAMIFNN 341
Query: 212 CGIYH 226
+ H
Sbjct: 342 IEVLH 346
>AB011178-1|BAA25532.2| 1369|Homo sapiens KIAA0606 protein protein.
Length = 1369
Score = 31.1 bits (67), Expect = 3.1
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = +2
Query: 38 TQNLFKLTKFIEVKKKDVNTYLYYKVYGIIASNI--MSHVTSIQLRSNRFADADALFRNV 211
T L L K +K D+ + K +IA + + HVT + LR N+ D DA+ N
Sbjct: 449 TLRLQALRKMPHIKHVDLRLNVIRK---LIADEVDFLQHVTQLDLRDNKLGDLDAMIFNN 505
Query: 212 CGIYH 226
+ H
Sbjct: 506 IEVLH 510
>AB231860-1|BAE19678.1| 1640|Homo sapiens hypothetical protein
protein.
Length = 1640
Score = 30.7 bits (66), Expect = 4.1
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = -2
Query: 503 FARLSSRACIVSTRGAKCEQSIYCEQSSGCNCAYGRCLC 387
+ + C GA C+ +C+ + C+ GRCLC
Sbjct: 1445 YGQACEHPCPPGFHGAGCQGLCWCQHGAPCDPISGRCLC 1483
Score = 29.5 bits (63), Expect = 9.5
Identities = 10/34 (29%), Positives = 16/34 (47%)
Frame = -2
Query: 488 SRACIVSTRGAKCEQSIYCEQSSGCNCAYGRCLC 387
+ C T G C Q+ C + C+ +G+C C
Sbjct: 1062 AETCPAHTYGHNCSQACACFNGASCDPVHGQCHC 1095
>BC126313-1|AAI26314.1| 1044|Homo sapiens MEGF11 protein protein.
Length = 1044
Score = 29.5 bits (63), Expect = 9.5
Identities = 16/64 (25%), Positives = 25/64 (39%)
Frame = -2
Query: 488 SRACIVSTRGAKCEQSIYCEQSSGCNCAYGRCLCVRTSMALWHVAPRAKSESPTGSVQYS 309
++ C T G C Q C C+ G+C C ++ R + E P GS +
Sbjct: 259 AQPCPPGTFGQNCSQDCPCHHGGQCDHVTGQCHC-----TAGYMGDRCQEECPFGSFGFQ 313
Query: 308 PTAR 297
+ R
Sbjct: 314 CSQR 317
>BC117419-1|AAI17420.1| 1044|Homo sapiens MEGF11 protein protein.
Length = 1044
Score = 29.5 bits (63), Expect = 9.5
Identities = 16/64 (25%), Positives = 25/64 (39%)
Frame = -2
Query: 488 SRACIVSTRGAKCEQSIYCEQSSGCNCAYGRCLCVRTSMALWHVAPRAKSESPTGSVQYS 309
++ C T G C Q C C+ G+C C ++ R + E P GS +
Sbjct: 259 AQPCPPGTFGQNCSQDCPCHHGGQCDHVTGQCHC-----TAGYMGDRCQEECPFGSFGFQ 313
Query: 308 PTAR 297
+ R
Sbjct: 314 CSQR 317
>AL834326-1|CAD38994.1| 626|Homo sapiens hypothetical protein
protein.
Length = 626
Score = 29.5 bits (63), Expect = 9.5
Identities = 16/64 (25%), Positives = 25/64 (39%)
Frame = -2
Query: 488 SRACIVSTRGAKCEQSIYCEQSSGCNCAYGRCLCVRTSMALWHVAPRAKSESPTGSVQYS 309
++ C T G C Q C C+ G+C C ++ R + E P GS +
Sbjct: 10 AQPCPPGTFGQNCSQDCPCHHGGQCDHVTGQCHC-----TAGYMGDRCQEECPFGSFGFQ 64
Query: 308 PTAR 297
+ R
Sbjct: 65 CSQR 68
>AL356104-4|CAH72941.1| 1037|Homo sapiens novel protein similar to
mouse Jedi soluble isoform 736 protein protein.
Length = 1037
Score = 29.5 bits (63), Expect = 9.5
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -2
Query: 461 GAKCEQSIYCEQSSGCNCAYGRCLC 387
G C C+ S GC+ +GRC C
Sbjct: 530 GEGCASRCDCDHSDGCDPVHGRCQC 554
>AL158169-5|CAH70011.1| 1037|Homo sapiens novel protein similar to
mouse Jedi soluble isoform 736 protein protein.
Length = 1037
Score = 29.5 bits (63), Expect = 9.5
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -2
Query: 461 GAKCEQSIYCEQSSGCNCAYGRCLC 387
G C C+ S GC+ +GRC C
Sbjct: 530 GEGCASRCDCDHSDGCDPVHGRCQC 554
>AK128673-1|BAC87564.1| 189|Homo sapiens protein ( Homo sapiens
cDNA FLJ46836 fis, clone UTERU2029660. ).
Length = 189
Score = 29.5 bits (63), Expect = 9.5
Identities = 27/82 (32%), Positives = 34/82 (41%), Gaps = 14/82 (17%)
Frame = -2
Query: 494 LSSRACIVSTRGAKCEQSIYCEQSSGCN----CAYGRCLCV----------RTSMALWHV 357
LS+ AC +S G C S + C C G C C RT + L+ V
Sbjct: 12 LSAPACGLSP-GPDCNASWQDRAADFCPVRAVCKVGPCPCCQLKTDPRLGKRTGLDLFSV 70
Query: 356 APRAKSESPTGSVQYSPTARPP 291
R+ +P GSV PT RPP
Sbjct: 71 WSRSAMLAPAGSVLAMPTLRPP 92
>AB300051-1|BAF64841.1| 1044|Homo sapiens MEGF11 protein.
Length = 1044
Score = 29.5 bits (63), Expect = 9.5
Identities = 16/64 (25%), Positives = 25/64 (39%)
Frame = -2
Query: 488 SRACIVSTRGAKCEQSIYCEQSSGCNCAYGRCLCVRTSMALWHVAPRAKSESPTGSVQYS 309
++ C T G C Q C C+ G+C C ++ R + E P GS +
Sbjct: 259 AQPCPPGTFGQNCSQDCPCHHGGQCDHVTGQCHC-----TAGYMGDRCQEECPFGSFGFQ 313
Query: 308 PTAR 297
+ R
Sbjct: 314 CSQR 317
>AB058677-1|BAB47410.1| 969|Homo sapiens MEGF11 protein (KIAA1781)
protein.
Length = 969
Score = 29.5 bits (63), Expect = 9.5
Identities = 16/64 (25%), Positives = 25/64 (39%)
Frame = -2
Query: 488 SRACIVSTRGAKCEQSIYCEQSSGCNCAYGRCLCVRTSMALWHVAPRAKSESPTGSVQYS 309
++ C T G C Q C C+ G+C C ++ R + E P GS +
Sbjct: 184 AQPCPPGTFGQNCSQDCPCHHGGQCDHVTGQCHC-----TAGYMGDRCQEECPFGSFGFQ 238
Query: 308 PTAR 297
+ R
Sbjct: 239 CSQR 242
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,121,065
Number of Sequences: 237096
Number of extensions: 1375176
Number of successful extensions: 3583
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 3343
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3583
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6324506272
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -