Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4h03
         (365 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024869-2|AAK68603.2|  542|Caenorhabditis elegans Hypothetical ...    26   7.2  
Z81477-5|CAB03926.1|  334|Caenorhabditis elegans Hypothetical pr...    26   9.5  

>AC024869-2|AAK68603.2|  542|Caenorhabditis elegans Hypothetical
           protein Y75B7AL.1 protein.
          Length = 542

 Score = 26.2 bits (55), Expect = 7.2
 Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
 Frame = -3

Query: 177 HNLISRVRLVSIGFDIPTVMTDRYSS-FVKGSNRTRR 70
           + + SR+ +VS+G +I  V     +  F++GSNR+RR
Sbjct: 234 YRVCSRMLMVSVGPNILIVCISALTLWFLRGSNRSRR 270


>Z81477-5|CAB03926.1|  334|Caenorhabditis elegans Hypothetical
           protein C27C7.7 protein.
          Length = 334

 Score = 25.8 bits (54), Expect = 9.5
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +1

Query: 220 GKSSIIL*ICVLYLVNICKLED 285
           G++ I++ IC+LYL    K ED
Sbjct: 165 GENPIVMEICMLYLAECLKTED 186


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,901,327
Number of Sequences: 27780
Number of extensions: 148697
Number of successful extensions: 281
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 276
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 281
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 514188384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)