Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4g23
         (164 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118364-1|AAM48393.1|  123|Drosophila melanogaster RE09547p pro...    64   2e-11
AE014298-771|AAF46058.2|  123|Drosophila melanogaster CG4111-PA,...    64   2e-11
AE014298-770|AAN09148.1|  123|Drosophila melanogaster CG4111-PB,...    64   2e-11
BT030434-1|ABO52854.1|  492|Drosophila melanogaster IP18315p pro...    31   0.29 
U95760-1|AAB54001.1| 1547|Drosophila melanogaster Sno protein.         26   8.1  
AY069555-1|AAL39700.1|  639|Drosophila melanogaster LD28458p pro...    26   8.1  
AE014298-1863|AAF48240.1| 1547|Drosophila melanogaster CG1903-PB...    26   8.1  
AE014297-3277|AAF56101.2|  639|Drosophila melanogaster CG31365-P...    26   8.1  

>AY118364-1|AAM48393.1|  123|Drosophila melanogaster RE09547p
           protein.
          Length = 123

 Score = 64.5 bits (150), Expect = 2e-11
 Identities = 31/45 (68%), Positives = 37/45 (82%)
 Frame = +1

Query: 1   KPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVKA 135
           KPLDLR KKTRA+RKAL+  +A  KT KEIRK+S+FP R +AVKA
Sbjct: 79  KPLDLRKKKTRAIRKALSPRDANRKTLKEIRKRSVFPQRKFAVKA 123


>AE014298-771|AAF46058.2|  123|Drosophila melanogaster CG4111-PA,
           isoform A protein.
          Length = 123

 Score = 64.5 bits (150), Expect = 2e-11
 Identities = 31/45 (68%), Positives = 37/45 (82%)
 Frame = +1

Query: 1   KPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVKA 135
           KPLDLR KKTRA+RKAL+  +A  KT KEIRK+S+FP R +AVKA
Sbjct: 79  KPLDLRKKKTRAIRKALSPRDANRKTLKEIRKRSVFPQRKFAVKA 123


>AE014298-770|AAN09148.1|  123|Drosophila melanogaster CG4111-PB,
           isoform B protein.
          Length = 123

 Score = 64.5 bits (150), Expect = 2e-11
 Identities = 31/45 (68%), Positives = 37/45 (82%)
 Frame = +1

Query: 1   KPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVKA 135
           KPLDLR KKTRA+RKAL+  +A  KT KEIRK+S+FP R +AVKA
Sbjct: 79  KPLDLRKKKTRAIRKALSPRDANRKTLKEIRKRSVFPQRKFAVKA 123


>BT030434-1|ABO52854.1|  492|Drosophila melanogaster IP18315p
           protein.
          Length = 492

 Score = 30.7 bits (66), Expect = 0.29
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -3

Query: 141 YSSFNGIDSRWEERFLSDLFPRLDLCFV 58
           Y++F   + +W +  + D+F RL LCFV
Sbjct: 46  YTTFFDDNIQWSQMVIKDIFQRLQLCFV 73


>U95760-1|AAB54001.1| 1547|Drosophila melanogaster Sno protein.
          Length = 1547

 Score = 25.8 bits (54), Expect = 8.1
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +1

Query: 7    LDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPP 114
            ++ R+KK++  +K   K   K KT+KEI   S   P
Sbjct: 899  VNARSKKSKKAQKKSKKKVKKEKTKKEITTSSATDP 934


>AY069555-1|AAL39700.1|  639|Drosophila melanogaster LD28458p
           protein.
          Length = 639

 Score = 25.8 bits (54), Expect = 8.1
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = +1

Query: 7   LDLRAKKTRAMRKALTKHEAKIKTRKEIRKK 99
           L+LRAK T  +RK L + E + + RKE+ ++
Sbjct: 156 LELRAKLTTELRKELAE-EVRSEVRKELAEE 185


>AE014298-1863|AAF48240.1| 1547|Drosophila melanogaster CG1903-PB,
            isoform B protein.
          Length = 1547

 Score = 25.8 bits (54), Expect = 8.1
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +1

Query: 7    LDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPP 114
            ++ R+KK++  +K   K   K KT+KEI   S   P
Sbjct: 899  VNARSKKSKKAQKKSKKKVKKEKTKKEITTSSATDP 934


>AE014297-3277|AAF56101.2|  639|Drosophila melanogaster CG31365-PA
           protein.
          Length = 639

 Score = 25.8 bits (54), Expect = 8.1
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = +1

Query: 7   LDLRAKKTRAMRKALTKHEAKIKTRKEIRKK 99
           L+LRAK T  +RK L + E + + RKE+ ++
Sbjct: 156 LELRAKLTTELRKELAE-EVRSEVRKELAEE 185


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,673,931
Number of Sequences: 53049
Number of extensions: 66155
Number of successful extensions: 370
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 345
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 370
length of database: 24,988,368
effective HSP length: 35
effective length of database: 23,131,653
effective search space used: 439501407
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)