Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4g22
         (751 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ821850-1|CAH25390.1|  426|Anopheles gambiae alpha-2,6-sialyltr...    25   2.5  
DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.        24   4.4  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    23   7.6  

>AJ821850-1|CAH25390.1|  426|Anopheles gambiae
           alpha-2,6-sialyltransferase protein.
          Length = 426

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -2

Query: 312 FLVFDNFPAFRCQFPELFVHLVISR 238
           F +FDNF  FR   P+   H++  R
Sbjct: 295 FNLFDNFKKFRSSHPQSNFHIIDPR 319


>DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.
          Length = 494

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 11/23 (47%), Positives = 18/23 (78%)
 Frame = +1

Query: 298 IKYQKDLPIQKVYVSVCSRTSFG 366
           I YQKDLP+++ YV + +R+ +G
Sbjct: 206 IFYQKDLPMRQQYV-MLARSLYG 227


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 10/36 (27%), Positives = 20/36 (55%)
 Frame = +1

Query: 211 MERERTSVDPGYYKMDEQFRELAAKCGKIIKYQKDL 318
           ++RE   ++  Y K DE+ +E+  K  +  ++ K L
Sbjct: 721 LQRELNELNSAYAKEDERLQEMTRKLHQRQQHMKKL 756


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 800,476
Number of Sequences: 2352
Number of extensions: 17574
Number of successful extensions: 37
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)